KEGG   Mercenaria mercenaria (northern quahog): 123539481
Entry
123539481         CDS       T07835                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer04137  Mitophagy - animal
mmer04144  Endocytosis
mmer04145  Phagosome
mmer04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    123539481
   04145 Phagosome
    123539481
   04137 Mitophagy - animal
    123539481
   04148 Efferocytosis
    123539481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmer04131]
    123539481
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmer04147]
    123539481
   04031 GTP-binding proteins [BR:mmer04031]
    123539481
Membrane trafficking [BR:mmer04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    123539481
 Endosome - Lysosome transport
    123539481
Exosome [BR:mmer04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123539481
  Exosomal proteins of other body fluids (saliva and urine)
   123539481
  Exosomal proteins of colorectal cancer cells
   123539481
  Exosomal proteins of melanoma cells
   123539481
GTP-binding proteins [BR:mmer04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    123539481
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 123539481
NCBI-ProteinID: XP_045180055
LinkDB
Position
18:complement(49215759..49235895)
AA seq 213 aa
MSQRGGAQRPNGAAQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQR
QASPNIVIALAGNKADLANKRMVEFDEAQAYADENSLLFMETSAKTAMNVNDIFLAIAKK
LPKSDSGGQAGQRPQAGVRLNEQNQPSEGGCCK
NT seq 642 nt   +upstreamnt  +downstreamnt
atgtcacaacgagggggagctcagaggccgaacggcgccgcacaaggaaagatctgtcaa
tttaagctggtactactaggggaatctgcagtaggaaagtcaagtcttgtactgagattt
gttaaaggacagtttcatgaatatcaagaaagcaccatcggagctgcatttttaacacaa
acagtctgtttagacgacacgacagtaaaatttgaaatctgggatacagcgggtcaagaa
agataccacagtctggcacctatgtattacagaggggcacaagctgcaatagtcgtttac
gacatcacaaatcaagacacatttggtagagccaaaacgtgggtaaaagaattacagaga
caggcaagtccaaatatagtgatagcactggctggtaacaaagctgatttggcaaacaaa
cgaatggttgagtttgatgaagctcaagcatatgcagatgaaaacagtttgttatttatg
gaaacttcagcaaaaactgccatgaatgttaatgatatatttttggcaatagctaaaaag
ttgccaaaaagtgatagtggtggccaggctggtcagagaccacaggctggtgtgagatta
aatgaacagaatcagccctcagaaggtggctgttgtaaataa

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