Mercenaria mercenaria (northern quahog): 123539481
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Entry
123539481 CDS
T07835
Name
(RefSeq) ras-related protein Rab-5B-like
KO
K07888
Ras-related protein Rab-5B
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04137
Mitophagy - animal
mmer04144
Endocytosis
mmer04145
Phagosome
mmer04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123539481
04145 Phagosome
123539481
04137 Mitophagy - animal
123539481
04148 Efferocytosis
123539481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123539481
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmer04147
]
123539481
04031 GTP-binding proteins [BR:
mmer04031
]
123539481
Membrane trafficking [BR:
mmer04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
123539481
Endosome - Lysosome transport
123539481
Exosome [BR:
mmer04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123539481
Exosomal proteins of other body fluids (saliva and urine)
123539481
Exosomal proteins of colorectal cancer cells
123539481
Exosomal proteins of melanoma cells
123539481
GTP-binding proteins [BR:
mmer04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
123539481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
123539481
NCBI-ProteinID:
XP_045180055
LinkDB
All DBs
Position
18:complement(49215759..49235895)
Genome browser
AA seq
213 aa
AA seq
DB search
MSQRGGAQRPNGAAQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQR
QASPNIVIALAGNKADLANKRMVEFDEAQAYADENSLLFMETSAKTAMNVNDIFLAIAKK
LPKSDSGGQAGQRPQAGVRLNEQNQPSEGGCCK
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacgagggggagctcagaggccgaacggcgccgcacaaggaaagatctgtcaa
tttaagctggtactactaggggaatctgcagtaggaaagtcaagtcttgtactgagattt
gttaaaggacagtttcatgaatatcaagaaagcaccatcggagctgcatttttaacacaa
acagtctgtttagacgacacgacagtaaaatttgaaatctgggatacagcgggtcaagaa
agataccacagtctggcacctatgtattacagaggggcacaagctgcaatagtcgtttac
gacatcacaaatcaagacacatttggtagagccaaaacgtgggtaaaagaattacagaga
caggcaagtccaaatatagtgatagcactggctggtaacaaagctgatttggcaaacaaa
cgaatggttgagtttgatgaagctcaagcatatgcagatgaaaacagtttgttatttatg
gaaacttcagcaaaaactgccatgaatgttaatgatatatttttggcaatagctaaaaag
ttgccaaaaagtgatagtggtggccaggctggtcagagaccacaggctggtgtgagatta
aatgaacagaatcagccctcagaaggtggctgttgtaaataa
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