Mercenaria mercenaria (northern quahog): 123539959
Help
Entry
123539959 CDS
T07835
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5-like
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123539959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123539959
Enzymes [BR:
mmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123539959
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
HECT type E3
123539959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
DUF5867
Motif
Other DBs
NCBI-GeneID:
123539959
NCBI-ProteinID:
XP_053382771
LinkDB
All DBs
Position
16:40371795..40615205
Genome browser
AA seq
3251 aa
AA seq
DB search
MTSLHFVVHPLPGTDEQLNDRLREVAEKISRHGYTAAGALSSLRNITVNQCVIGPQYIAF
LLEDGRVCRVPFSILNERLDLNKNENTKPPTKAVKTERAGGSRSTTHVVDSPLVLVSDVM
GGTAEQPTARWSTVVSGSTATASTRNNNTTQGYRTMQRTVHVNRGRRSGVIVGTRPLVPA
SVVPEELINQCQVVLQGKSRNLIIRELQRTNLDVNLAVNNLLSRDDEGEGDDDDSQDSYV
PDDLISLLDSGMHPDHPSVIIDGDAMFSEDMFGYSSIRSRGSGARSRLGERTDRDADRDR
ERESIFRIRDRRRLDTTLRDEALKSLERDKVEGFTADITKKLANPNASPVHLGEDLQYWV
EKDGNCPRFSHIAAMHSELVAVGTNGQLYSWKWHDFEPYRHPENPNIHHPKTIALGLQHE
KIQGISACSVRASVSTESDKVATWVDDTLNMVASKLEHSAQTFQEFLTDKIASLHTCSLY
TCARLESGALYWWGAMPFAQRKKLLERNRSKKKKNKNSSSQSDINTGSLVCLRNSPMFHA
GAVAFTTVDGTPKVGQLLESAWSLNDTCRFKIKPVHVPESRPERDSSSDSKPDMPPPPSP
ASSTCSDHSGPVLVSSRKRKKAPTPSKEIEKQRDEESWPLKDVIFVEDIKTVPVGKVLKV
DGAYAAVKFPTTKDGSSQELGTTTSKEDPSSLLQDCRLLRKDELSVVKSMSAPRLPDCFQ
KVPKKVTIVENGQILAVAVDCEGIHVIARSGVRLNYIVYNLSSGKIERDSPFPTEAQAFM
GSHRSEITLHNTGEESFVQLRDGNGALYPFAKDCSEGIKDPMWLDLPPVRCLGIRTHYLR
DVVTSAQKNRAMVLVLAIEHQTLIPHILRCDVDKVKTVLAALELDSSNQKVVQELLQEHC
DGNRNILHTCVAMSVPTSNKENERTDPPVGPSSTTAVTSTSSGYTSTLEVMNAVTSAVDA
LTAIQSSRGGPSTGPSADTSGRGVSLREMMRRASSAARAVSGLDVREPEEGMAIPTLSWP
PDPPSYESVIRQDLDKPSLSGQSSSGQSTSIPLPAEFSTINIPAVKLDEKERPNAALQIL
KCLCESNVLKPHLRDLLAAKNAEGCTPFMQAVKGRAYMAAMTLLDTVKRAGTSKDSTEVD
KATMMSMLYPTGSSLDNSPLHVLCCNDTCSFTWTGAEHINQDIFECRTCGLLGSLCCCTE
CARVCHKGHDCKLKRTSPTAYCDCWEKCKCKALIAGQQGPRLDLLNRLLIETDLVTLANS
RGENILLFLVQTVGRQLVEQRQYRPNRSRVTSAVPRKAPNNDLDVEMPEHDLEPPRFSRR
ALERILNDWTAVKAMLLSGMRNKRGTNPDVVYEEQLYLESQSGTARLDKFTHCLLVKCSV
EMLDTLLTTLIREMRNETTEGRKAEAKMVARRFIRSVARIFVVLNVEMTPNSGKKKSPGI
PSCQPLVKCKRAFQALINIAVEELCEIANSLIAPVRLGAARPTAPFSLVAANVEAVQGSE
EIFSVDPLPPKTSSVDESAHSVSYVTHSVPDRDLPSDRENVDQGDRDEEEMMPVDIEEDI
EVVGGILMGNEDGHQSDNDDRQSEHSEHEQQPPEQDDVAESDMDLDLLAESESDSESMHS
NQDNVSVQRSAVTMATAGSDAGMGSLAHFSDSGESSNQEEEYESEGGDSEEHEGEDLGTL
DEQLERRNNATSSQGQRTLQAPQTMQWAIRQREPQSTRAPPTVATTTATTAGGGSSLIYI
DPSNLRRTTVTTTAAVTPEAPITMATTCSQLARSFGIVVRQIADLLTMLQDYHALAPTLP
RILDISDQEALELQLYLEYQLKPTWDWLITILDSTEAQLRFGSALSNTSDPANPSHPLCH
ARTARERTRREETPILQVVDTRRRQRFGALGGTSDHGSNARRDFLNYALSLMRSHNNEHS
DSLPVIDIASLRHVAYVFDALIYYMRSGTDTDTDVLRDGISVISWQEHDENENDDHDDDL
NNAMSMDTESIDGDGEMSGKQGRKHSFFQRSDSTLFLGCPPPDPFQTPLVQALPLADQPH
LLQPNARREDLFGVAKQTVVPNSTVDDKNIPGSESVLDKLPLHLSLSVRVPESQSGVSGK
IQTDSQSSVPGGNNDNQSNTGASVIVRSATYQPAPVWDSGDPSISSPFFSSAYDANVPTT
RASTQGEASTIQTTVQSSTPTVRSIYPVVNVSLTPQVTTERAEVHQPSVIVHSSTAMSAN
VSVANMSSASMGGNLLSASSPIFNISDPMPSDLRTTAVNIPLTSESVITSAPSPSRAPSS
TPVIIQQSGSVQGLPGHSESPVSMVMAPVTSDVNQSQNTAVIASQSPSRSQTATASLERD
LEVSSQETSLDLSTNQARSATVTSDSSAADSSQSTQPVAMDMSVSMEMTTGGSLSYQDSA
GSSGIAVSSNVTDTVATASDRSVPLQSQLSGSSGVTEYSVTGESPVRPGARSDSLQGSSL
GGSQGAMSVAPSFPDSSPITPPSHGIAGSSLSQTDSSYPENTSNSEIGSLDLSRVEGRSL
DLSSGRSSDTGSSQVAGSSRTQDMPLSMDTDGSLDLSKSAAALTTLQPVPARPTATPNNS
SVDTPMDMVGANENVSNTVDIETSQGSQAASRQPPTRSQMISHDALLGRWRLALDLFGRV
FCDDVGAEQGSVISELGGFPVKESKFRREMEKIRNSQQRDLSLEVVRSRNQLITQSFKQL
NTYFNRRTNTSGPPLAVHRVKVTFTDEPGEGSGVARSFYTALANAVLSQEKLPPLESIMV
GSKSLQYNLIQRLRTRERERERERERQRTSSSQRRSSRERDSRRTLSYDAPPFYMPSDAN
PNPSSNPEPPPEGSSDTMTQYRRQLGERLFPRVRALQPALAPKITGMLLELSPAQLLVML
TSEETLRQRVDEAVDICMSHNTREQRELNAEALLDLDIFNLSSTGTNSGKKKKPASQTDR
RSDIEDDDDLEDNAPLFWQPGKRGYYTLRPGKGSPERLNAFRNVGRILGLCLLQNEMCPL
FLNRHVLKYILGRKIGWHDLAFFDPVMYESLRQLVLDSETKDASLMFQALDMNFCVELCA
EEGGEQVELVPGGTDIEVTAQNVHDYVRRYAEYRMVKVAEKALKRLRMGVFDVIPSNSLE
GLTSEDLRLLLNGVGTINVQTLISYTSFNDESSESNEKVQRFKRWFWSVVEKMNNQERQD
LVYFWTSSPALPASEEGFQPMPSITIRPADDDHLPTANTCISRLYIPIYTTKQILKTKLL
LAIKTKAFGFV
NT seq
9756 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgctacattttgttgttcatccgcttccaggcactgacgaacaactaaatgat
agattaagagaagttgcagaaaagatcagtcgtcatggatacacagctgcaggagcactc
tcctctttgagaaacattactgtaaaccagtgtgtaataggcccacagtacattgccttc
ttacttgaggatggtagagtatgcagggtgccattttccattcttaatgagagacttgat
ttgaacaaaaatgaaaacacaaagccacctactaaagcagtgaagacagagcgagctgga
ggctcgagatcaacaacccatgttgtcgacagtccacttgtactcgtctctgatgtcatg
ggtggaactgccgaacaacctactgcgcgttggagcactgttgtttctggatctacagca
acagcatctacaagaaacaacaacactacacaggggtacagaaccatgcagagaaccgta
catgtgaacagggggcgaagatcaggagtcattgtagggacacgacctctggttcctgct
tctgtcgtaccagaagaactaatcaaccagtgccaggttgtgttacaaggaaagtcaaga
aatctcatcatcagggagctgcagagaacaaatttagatgtgaaccttgccgtcaataac
ttattaagtcgtgatgacgaaggagaaggtgacgatgatgacagtcaggattcatatgtt
cctgatgacctaatctcgcttcttgatagtggcatgcacccagaccaccctagcgtcatt
attgatggggatgccatgtttagcgaggacatgtttggctactcctcaattagaagtcga
ggttctggagcaagatcaagattaggtgaaaggacagacagagatgccgatcgtgatagg
gaacgcgagtctatatttagaatcagagataggcggagattagacacaacattgcgagat
gaagcattgaagtccctggagcgggacaaagtggagggatttacagccgatatcacaaag
aagttggccaatccaaatgccagtccagtacatcttggtgaagacctgcagtattgggtg
gaaaaggatggaaactgtccaaggttttcacatattgctgccatgcattcagagctggtt
gccgttggaaccaatggtcagctatacagttggaaatggcatgactttgaaccatataga
catccagagaacccaaacatacatcatcctaagacaattgccctcggtcttcagcatgag
aaaatccagggtatatctgcctgtagtgttcgtgcgtccgtcagcacagaatcagacaag
gtggccacgtgggttgacgacacattgaacatggtagcatccaagttggagcacagtgca
cagacgtttcaggagtttctaacagacaagattgccagccttcatacgtgttctctctat
acctgcgctcgactagagagtggcgctttatactggtggggtgccatgccatttgcgcag
agaaagaaacttttagaaaggaatagatcaaagaaaaagaagaacaagaactcatcatct
cagagtgacataaacacaggatcattggtttgtttacggaactcgccaatgtttcatgct
ggagctgtagcatttacgacagtggatggtacgccaaaagtagggcagctactggagtcg
gcatggtccctcaatgatacatgcagattcaagataaaaccagtccatgtaccagaaagc
agacctgaacgtgactcatccagtgactcgaagccagacatgccacctccaccatctcct
gcatcatctacatgcagtgatcacagtggacctgtacttgtatcatctagaaagagaaaa
aaggcacctacccccagcaaggaaatagaaaaacaaagagatgaagaaagttggcctttg
aaagatgttatatttgtagaagatataaaaaccgttccagttggcaaagtgttaaaggtt
gatggtgcctatgcggcagtgaaatttcctacaactaaagatggcagttcacaagagctg
ggaaccactacctcaaaggaggacccatctagtctgctgcaagattgtcgtctgcttcga
aaagatgaactctccgttgtgaagagtatgagtgcaccaaggttaccagactgcttccag
aaggttcccaagaaagtcacaattgtagagaatggacagatactggctgtagcagtagac
tgtgaaggaatccatgtcatagcaagatcaggtgtgcgtctgaactacattgtgtataat
cttagttcagggaagatagagcgagattcaccgttcccgacagaggctcaggctttcatg
ggcagtcacagaagtgagataacactacataatactggagaggaatcatttgtgcagtta
cgggatggcaatggtgctctgtacccatttgctaaggattgctcagaaggaatcaaggac
cctatgtggttggacctgccccctgtcaggtgtttagggattaggactcattacctgaga
gatgtggtcacctctgcacagaaaaacagggctatggtgttagttcttgcaatagaacac
cagacgttgatcccacatatactgagatgtgatgtagacaaagtgaaaactgtccttgct
gcgttggaactggattcaagtaaccagaaagtggtacaagagctgctacaagaacattgt
gatggtaacaggaatatcttgcatacgtgtgtagccatgtcagtgcctacatctaacaag
gaaaatgagagaactgatcctccagtaggtccaagcagtacaacagctgtgacgagtaca
tcaagtggttacacgtccacactagaggtgatgaatgcagttacaagtgctgtagatgca
ttaactgctatacagtcatccagaggaggtcctagcacgggacccagtgctgacacttca
ggcagaggtgttagtctaagagaaatgatgagacgagcttcatctgctgcacgtgctgtc
agtggtctggatgtacgtgagcctgaggaaggtatggcaatacccacactgagctggcca
ccagatcctcccagttacgagtctgttattcgtcaagatctagataagcccagcctcagt
ggtcagtcctcgagcggtcagtcaacctctattcctcttcctgcagagttcagtaccatc
aacatacctgccgttaaattggacgagaaagagagaccaaatgctgcgctacagatactc
aagtgtttatgcgagtcaaatgtcctgaaaccgcatttgagagatcttttagcggcaaag
aatgcagaaggctgtacacctttcatgcaggcggtcaagggtcgagcatacatggcagca
atgacattgctggacactgtcaagcgtgccggcacgtctaaagacagcacagaggtggat
aaagccactatgatgagcatgttataccccactggttccagtctggataactctccactt
catgttctctgctgtaatgatacatgtagttttacctggacaggggcagagcatataaat
caggatatatttgagtgtcgtacatgtggactgctgggctcgctgtgttgctgcacagaa
tgtgcacgggtctgtcacaaaggacatgattgcaaactgaagcgtacatctccgactgcg
tattgtgactgttgggagaaatgcaaatgtaaagctctgattgctggacaacagggaccc
agacttgatcttctcaacagacttctcatagaaacagatctggttactcttgcaaacagc
aggggagagaacattttgctgttcctggttcagacagttggacgtcagttagtagaacag
cgtcagtacagaccgaacagatccagggtcacatctgctgtgccgaggaaagctccaaat
aatgatctagatgtagaaatgcctgaacatgacctggagccaccgaggttcagtcgtaga
gctctagagaggatcctcaatgactggacggcagttaaggcaatgttactgagtggcatg
cgcaacaagagaggcaccaacccagatgtcgtgtacgaggaacagctttacctagaaagc
cagagtggaacagccagactggacaagtttactcactgcctgcttgtgaaatgtagtgtt
gagatgctggacacattgttaaccacactgatcagagaaatgagaaatgaaaccactgaa
ggcaggaaagctgaggctaagatggtagctcggagatttatccgctcagttgccagaata
tttgtagttctcaatgttgagatgacccctaactctggcaaaaagaaaagtccgggtata
ccatcatgtcaaccattggtaaagtgtaaaagagctttccaagccctgatcaacattgca
gtggaggagctatgtgagatagcaaactccctgatagctcctgtacggctaggagcagct
aggcccacagctccattttctctggttgctgctaatgtggaagctgtccagggaagtgag
gaaatatttagtgtagatccactgccacctaaaacatcctcagtggacgagtctgctcac
tctgtgtcgtacgtgacacacagcgtaccagatcgagacttgcctagtgatagggagaac
gtagaccagggagacagagatgaggaagaaatgatgccagttgacattgaggaagatatt
gaggtagtaggtggtattctgatgggtaacgaagatggtcaccagtcagataatgatgac
agacaatcagaacactctgagcatgaacagcagcccccggaacaggacgatgttgctgag
agcgacatggatctggacctgttagccgagtctgagagtgatagtgagagcatgcatagt
aaccaggacaatgttagtgtacagagaagtgctgttaccatggcaactgcaggatcagat
gctggtatgggaagtttggctcacttctcggactctggtgaatcgtccaatcaggaagaa
gagtacgagagcgagggtggtgacagtgaggaacatgaaggggaagatcttggcacactg
gatgaacagcttgaacgtagaaataatgctacatcaagccaaggccagagaacattgcaa
gcccctcagacaatgcagtgggcaatcagacagagagagccccagagtacacgggcccca
cccacagtggctacaactacagccaccactgcaggaggtgggagtagcttaatatacata
gatccctcaaatctccgccgcacaacagtgacaacaactgcggctgtgacaccagaggct
cccataaccatggctaccacatgcagtcagctggcaaggtcatttggtattgtggtacgt
cagatagcggacctgttaaccatgctgcaggactaccatgctctcgccccaacgttacca
cggatactagatatatctgaccaggaggccctagaactccagctgtatttagagtaccag
ttaaagccaacatgggactggttgatcacaatattggactctacagaagcccagttgaga
ttcgggtctgccctgagcaatacatctgacccagcaaaccccagtcatcccctgtgccat
gctaggacagctcgagaacgaacccggagagaggagacaccaattttacaagtcgttgat
acaagacgtcgacaaagatttggtgctcttggaggtacatcagaccatggtagtaatgct
aggagagatttcctgaactacgcactgtcattgatgaggtctcacaacaatgagcactct
gactcgcttccagtgatagatatagcctcgttacgacatgttgcttacgtcttcgatgcc
ctgatttactacatgaggagtgggactgatacagatacagatgttctacgagacggaata
tctgtgatatcatggcaggagcatgatgaaaacgagaatgatgaccatgatgatgattta
aacaatgcaatgtcaatggacacagaaagtatagatggcgacggtgaaatgtcgggaaag
caaggacgcaaacattcattttttcaaagatctgactcaactctatttttgggttgtccg
ccacctgatccctttcagacaccgcttgttcaagctttgccactggctgatcagccacat
ctgttgcagccaaatgcaaggcgggaagatctatttggtgtagcaaaacagactgtcgtt
cctaattctacagttgatgacaagaatatacctggtagtgaaagtgtgcttgataaacta
ccactgcatttatctttatctgttagagtgccagaatcccaatctggagtgtctggtaaa
attcagactgattcacaatcgagtgttcctggtggaaataatgataaccagtctaataca
ggtgctagtgttattgtacgatcagcaacatatcaaccagcaccagtctgggattccggt
gatccctcaatatcttctccttttttctcgtcagcatatgatgcaaatgttccaactaca
agagcgtcaacacagggcgaggcaagtacaatacagaccacagtgcaatctagtactcca
actgtacggagtatttatccagtggttaatgtctccttgacaccacaggtaaccacagaa
agggcagaagttcatcagccaagtgtcatagttcattcaagtacagccatgtcggctaat
gtatcagttgcaaatatgtcgtctgccagcatgggaggcaatctgttgtcggcaagttca
ccgatattcaatatcagtgatcccatgcctagtgatttaagaactactgctgtgaatata
cctttgacttcagaatctgttattacatcagcgccatccccatcaagggctccgtcctct
accccagtaattatacaacagtcgggaagcgtgcaagggttaccaggtcactctgaatct
cctgtttccatggtgatggcaccagttacctcagatgtgaaccagtcacagaacacagca
gtcatcgccagtcagtcaccttcaagaagccaaactgcaacagcttcactggagagagat
ttagaggtttctagtcaagagacaagtttagatctcagtaccaatcaagcaaggtcggct
actgtaacaagtgattctagtgctgctgacagttctcaaagtacacaacctgttgcaatg
gacatgtcagtttccatggaaatgaccacaggggggtcgctatcgtaccaagatagtgca
ggaagcagtggtatagcagtgagcagtaatgtgacagataccgtggcaacagcctctgat
aggtcagttccgctgcagtcacagctctctggtagcagtggggttaccgagtatagtgta
actggggagagtccagttcgacctggtgccaggtctgattctctacaaggcagctcactg
ggagggagtcagggagcaatgtcggttgcaccaagtttcccagactcttcaccaataact
ccaccaagccatggtattgcaggttcaagtctttctcagactgactcttcatacccagaa
aatacaagcaactcagaaatcggaagtttggatctttctcgtgtagagggtagaagtctg
gacctgagttcaggcagatctagtgatactggttccagccaggttgcaggttcaagccgg
actcaagacatgccattaagtatggatacagatggttccctggatttaagcaagtcagca
gcagctttaaccacgctacaaccagtaccagctcgaccaacagctacaccaaacaacagc
tctgtggatacaccgatggacatggttggagccaatgagaatgtctcgaatactgttgac
atagaaacctcccagggttcacaggctgcatccagacaacctccaaccagatctcagatg
atatcccatgatgcactgctaggaagatggcggttagcattggatctgtttggacgtgtc
ttttgtgacgacgtaggggccgagcagggctcagtgataagcgagcttggtggatttcca
gtgaaggagagtaagttccgacgagagatggagaaaatacgcaactcacagcagagagat
cttagtcttgaggttgtgagatctagaaaccagctaattactcagtctttcaaacagtta
aatacatactttaaccgccgtactaatacaagcggaccgccacttgctgtgcatagggtc
aaggtcacatttactgatgagccgggagagggaagcggagtggcccggagtttctatact
gccttagctaatgcggtgctgtcacaagaaaagttacctccccttgagagtataatggtt
ggcagcaaaagtttacaatacaatctaatccagagattgagaacgagggagagagaacgt
gagcgtgagcgagagagacaacgcacgtcttcatcccagagacgcagtagtagagaacgt
gactccagacgcactctttcatacgatgcaccaccattttacatgccatctgatgcaaat
ccaaacccttccagcaatccggagcccccaccagagggcagcagtgatacaatgacacaa
tataggcggcagctcggcgagaggttattccccagagtcagagcactccagccggcattg
gctccaaagataactggaatgttattagagttgtccccagctcagttgttagtgatgtta
acatcggaggaaacactgagacaacgtgtagatgaagctgtagacatctgcatgtctcat
aataccagagagcaaagagaactgaatgcagaagcattgttagatctcgacattttcaac
ctgtcttcaaccggaaccaattctggaaagaaaaagaaaccagcgtcacagactgacaga
cgtagtgacattgaagacgatgatgatcttgaagataatgctccgttattctggcagcca
ggaaaacgaggatattacactttacgtcccgggaaggggtctccggaaagattaaatgca
tttaggaatgttggaaggattttaggattatgtcttctacaaaacgagatgtgtccattg
tttcttaatcgtcatgtgctgaaatacattcttgggaggaaaatcggctggcatgatttg
gcattctttgatcctgtgatgtatgaaagtttacggcaacttgttctggactctgagacg
aaagatgcttcccttatgttccaggcactagacatgaacttctgtgtggaactttgtgca
gaagagggtggcgaacaggtagagttagtacctggtgggacagatatagaggtcacagct
cagaatgtgcatgattatgtacgtagatacgctgaatataggatggtgaaagtggctgaa
aaagctctcaagaggttaagaatgggagtatttgatgtgataccatccaattcattagaa
ggcttgacatctgaagatctgagactgctgttaaatggtgtaggcaccatcaatgtacag
acactcatcagctacacatcttttaatgatgaaagtagtgagagtaatgagaaggtacag
agattcaagcgctggttctggtctgtggtggaaaaaatgaacaaccaggagaggcaggac
ttggtatatttctggacatctagtcctgcattacccgccagtgaggagggctttcagccg
atgccaagcatcacaatacgtccagctgacgatgatcatctaccgacagccaatacatgt
atatctagactgtatatcccaatttataccacaaaacaaatactgaaaactaaactactg
ttagcaatcaagacaaaagcatttggatttgtttaa
DBGET
integrated database retrieval system
