Mercenaria mercenaria (northern quahog): 123540022
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Entry
123540022 CDS
T07835
Name
(RefSeq) low-density lipoprotein receptor-related protein 8-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123540022
Membrane trafficking [BR:
mmer04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
123540022
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
EGF_CA
cEGF
SGL
DUF5050
Vgb_lyase
EGF
Motif
Other DBs
NCBI-GeneID:
123540022
NCBI-ProteinID:
XP_053382467
LinkDB
All DBs
Position
16:27886118..27901390
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AA seq
569 aa
AA seq
DB search
MKEFNKDYGLLILLLVFGCVRILRADDVNEESCKSTHWQCLKSGKCIPLSWKCDSEGTDC
GPDDDSDEQNCPPKTCADEEFSCPSTSQCVPKRWVCDDDPDCDNGEDEADCVSNKTCDQL
GEFDCYGDSSFCIAIEKVCDGKNDCQRKEDEDSALCKLSDRDPCLHHKCGDHSHCVNKAY
SDSTLVAKCECNSGYRWVEEEKLCKDIDECEQPGLCSQICINTRGGYKCECFPGYTIERH
YFCRANGEKAWLYYTNRRDIRRLRTDSRYKEIIVEETTNSIALDIDYEDGLMFWTDVGTE
KIMRAKVGGDAVLANDIQTLISNEKGDAFSPDGLAVDWLYKHFYWTDTGSDTIRVANYVG
NKSKTLVSTGLDDPRAICVDPENGYMYWTDWGQNPKIERCGMNGENRETMVNGGDDLQWP
NGLTIDYIGKRIYWIDSKLHKIGTANFDGSGKGHVPVDATVIGHPFSISVFEDSLYWTDW
HTNSIRSIHKITGRNAKTLSLGSYSVMDIKVYHELRQIRDFKEKAKDLCRNAHCEYMCLP
AAKISGNATVSCVCADNQQLKSDKRSCMH
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatttaataaagattacggattattaattctgttgttggtatttggatgtgtg
cgtattttgagagctgatgatgtgaatgaagaaagttgtaaatctactcattggcaatgt
ttaaagagtggaaaatgcattccgcttagctggaaatgtgattcagaaggtaccgactgt
gggcctgatgacgactccgatgaacaaaactgtcctccaaagacctgtgcagatgaagaa
tttagttgtcctagcactagccagtgtgtgcctaaaagatgggtatgcgatgatgatcct
gattgtgacaatggagaagatgaagcagattgtgtcagcaacaaaacatgtgatcaactg
ggcgaatttgattgctatggtgatagttccttttgtatagccattgaaaaagtatgtgat
ggtaaaaatgactgtcagcgcaaagaagatgaggacagtgctctctgtaaactttcagac
cgtgatccatgcttgcatcacaaatgtggtgaccattctcactgtgtaaacaaggcatat
tccgacagcacacttgtagctaaatgtgagtgcaacagtggataccgatgggtagaggag
gagaaattgtgtaaagacattgacgagtgtgaacagccaggtctctgctctcagatctgt
atcaatactagaggtggctataaatgcgagtgttttcccggctataccattgagaggcat
tatttctgccgagctaatggcgaaaaggcatggttgtactacacaaatcgtagggatatt
cgtagactgaggactgactctagatacaaggaaattattgttgaggaaacaactaacagc
attgctttagatatagattatgaagatggtctgatgttttggacagatgttggcactgaa
aaaattatgagagccaaggttggtggtgatgcggttcttgctaatgatattcaaacgttg
atcagtaatgaaaagggagatgccttttccccagatggacttgctgttgactggctgtac
aagcacttctactggactgacactggatctgataccataagggtggcaaattatgttgga
aacaagtccaagacactcgtctcaactggtcttgatgatccaagagctatctgtgttgac
ccagaaaatggatatatgtactggacagattggggtcagaacccaaagattgagagatgt
ggaatgaatggtgagaacagagaaacaatggtgaatggtggtgatgatttgcaatggcct
aatggactcactattgattatattggaaagcgaatttattggattgattccaaactgcac
aaaattggtactgctaattttgatggaagtggcaagggacatgttcctgttgatgcaaca
gtgatcggtcacccattctccatctctgtatttgaagattctctttactggacagactgg
cacacaaactccatccgttcaatccataagattactggtagaaatgctaagacattgtcc
cttggttcttactctgtgatggatataaaagtctaccatgaactgaggcaaataagagac
ttcaaagaaaaagccaaggacttgtgcagaaatgcccactgtgaatacatgtgtctgcca
gcagccaagataagcggtaatgccacagtatcatgtgtttgtgctgacaaccaacagttg
aaaagtgataaaagatcttgtatgcattga
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