Mercenaria mercenaria (northern quahog): 123540097
Help
Entry
123540097 CDS
T07835
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor ROR-alpha A-like
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123540097
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmer03310
]
123540097
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
123540097
Nuclear receptors [BR:
mmer03310
]
1. Thyroid hormone like
1D. Rev-Erb
123540097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CENP-S
Motif
Other DBs
NCBI-GeneID:
123540097
NCBI-ProteinID:
XP_053381767
EnsemblRapid:
LOC123540097
LinkDB
All DBs
Position
16:18492141..18503837
Genome browser
AA seq
676 aa
AA seq
DB search
MNDDLSDTIEQALKYASPLPVTSTDDNMTIDTPEPEGKIENIIVHEDECVTKLEEFLCGI
SEDNGVDEELNNILFPDCWEKSRPYLSQDSISSLDALGVSDQNYSIHSSVIQSQDRHSDV
TDKVKDSPDLANSVELENLDFGHVETCAIDESKDSELSQILSEAALTDVHPNKASGLVSD
VFDKTEVGNICEQMQGKLSKDFTSSIVSSETDELKPKVKRRRRREKNPDPAPPPVLPPCS
ICDEKSSGYHYGANTCEACKGFYRRTLKKNEVDYKCKCLPDDKERWKRGPXKNGCPACRY
EKCLAVGMSKNAIKIGRYTLNHKTRNIKEVKSIETIDSFIAALTETMLETTSSSADLETF
TAAASNEDIAELFTDQPDDDNKPLKRQKLSSPGPPGNSVLSLREIESVVKTLTEAHTTLH
LDERINMSKETIRKRQYEYLEKYKAKLEVFGSMGNLTKDEITDFYNITGIDIDGRIKQVN
DAFKFFKKKGTYIVEFAKAIPGFKTLGLKDQENLIKASRMENSMVAVYKTKLKCIDKERQ
VVTTAWGAHMHLDEIKSLIPTDLLHKKRDAMEKLLELSLSVQEEAVLRAILIVSSDRCRL
DEPHKVDLIQEKLVACLQHLINIRPGSSGALLYRIFNLMTNLRDVTDREMSFAKSLLVEW
PILSLDNYNLLKNFVT
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgatctctcggacacgatagagcaagcattgaaatatgcgtctccacttccg
gtgacgtcaacagatgataacatgacgatagatacaccggaaccggaaggtaaaattgaa
aatattatagtgcacgaagatgagtgtgtgacaaaacttgaggaatttttatgtggcatt
tctgaagacaacggcgtagatgaggaactcaacaatattttgtttccagattgctgggag
aaatcgcgaccatatttgtctcaagattcaatatcctctctcgatgctttgggtgtgtcg
gatcagaactattccattcattccagtgtcatacagagccaagatcgtcattctgatgta
acagataaagttaaagatagtcctgacctcgcaaatagcgtagaacttgaaaatcttgat
tttggtcatgttgaaacatgtgccattgacgaatcaaaagattcggagttatcgcagatt
ctgtcagaagcggcactaactgatgtacatccaaataaagcttccggtctggtaagtgat
gtttttgacaaaacggaagtaggcaacatttgtgaacaaatgcagggcaaactttcaaaa
gattttacgtcttccattgtttccagcgaaacagatgagctcaaaccgaaggtaaaacgc
agacggcggcgagaaaagaatcctgatccagccccgccgccagttcttcctccgtgtagc
atctgtgatgaaaaatcttccggttatcactacggagcgaatacatgtgaagcttgcaag
ggattttaccgcagaactttgaagaagaacgaagtagattacaaatgtaaatgtttgccg
gatgataaagaaaggtggaaacgaggtccanttaaaaacggctgtcctgcgtgtagatat
gaaaaatgccttgctgtcgggatgtcaaaaaatgcaataaaaatcgggagatacacattg
aatcataaaaccagaaatatcaaagaggtcaaaagtattgaaacaatcgacagttttatc
gcagctttgactgaaactatgttagagaccacgtcatcttccgcagatttagaaactttt
actgctgccgcatcaaatgaggatatcgcagaactcttcacggatcagccggacgacgac
aacaaaccgttaaagagacaaaaactatcatcgccaggcccacccgggaactcggtgtta
agtctaagagagatagagtcggtagttaagaccttgacagaggctcacacaacactgcat
ttagatgagaggatcaacatgtcgaaagagactatccggaagagacaatatgaatatctg
gaaaaatataaggcaaagctagaggtgttcggaagtatgggaaacctcactaaagacgag
ataacagatttctacaatatcactggaatagacatagatggtcgaatcaagcaagtaaat
gatgcatttaaattctttaaaaaaaaaggtacctacatcgttgaatttgccaaagcaatt
cctggattcaaaacccttggactgaaggaccaggaaaacttaatcaaagcctcccgtatg
gaaaattcgatggtcgctgtctacaaaaccaaattaaaatgtattgacaaagagaggcaa
gtggtaactaccgcatggggtgcgcatatgcacttagacgaaatcaagagtcttattccg
actgatttgctgcataaaaaacgtgatgcaatggaaaagttactagagttgagcttgtcc
gtccaagaggaggctgttctaagagcaattcttatcgtctcctcagatcgttgcagactt
gacgaaccccacaaggttgacctaatccaggagaagctagtcgcttgtctacaacatctg
ataaacatccgaccaggtagctccggggctctgctctacaggatttttaacctgatgacg
aacttgcgagatgttacagacagggaaatgagctttgcaaaatcgcttcttgttgaatgg
ccgattttgtctttggataattacaatttgttaaagaattttgtaacttaa
DBGET
integrated database retrieval system
