Mercenaria mercenaria (northern quahog): 123540106
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Entry
123540106 CDS
T07835
Name
(RefSeq) DENN domain-containing protein 3-like isoform X1
KO
K20162
DENN domain-containing protein 3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123540106
Membrane trafficking [BR:
mmer04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123540106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WDR55
uDENN
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML
Beta-prop_IP5PC_F
CFAP43_N
Beta-prop_LRRK2
WD40_2
Beta-prop_EML_2
dDENN
Avl9
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_Vps41
NBCH_WD40
Beta-prop_CAF1B_HIR1
GRAM
Vps36_ESCRT-II
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
123540106
NCBI-ProteinID:
XP_053382266
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Position
16:complement(19458491..19542226)
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AA seq
1312 aa
AA seq
DB search
MNKFVVPNALADVVLLVGVDDNVGLIPVDAGDVSVYNALFELKYEAQVLSAISGTDMVNF
HPFAHRVDSYPPNNTRETFEHQAEEMVKARERMMSDFSLGSKKSFQNTESSPKKTTRSIS
VSPKMLLARSMSMTIKRPRLGGNTVNIVPELPISDEVINSISTFCFPDGLKIHERKPEST
THFFVLTDISGRRSYTTCLTFYRPFSVEKDDQGNAYINLDLAEQEHSDDDKMRCYIPQCF
VIISKFPYYTTMKECLSSMLSYIEKDPEEMTTFLKEYANVITHTPVPPAGNLAVNFRLYN
LNVTLMPPTHPDKPVIDLQLHLTFLCFNAEEFLRILSCVLVEERIVFLSSNYALLTLIME
SVMNLVLPFKWRFTYSTILPSSALGYLESPGTFMYGVHSRHKEEVEQVEGLILVDIDEGT
VFIPEQDCQATHVKQNGYPPTSSVPNLPSEMATVFKNKWSHLKLQFDLLDTIRPFSYNIE
QMREDRKKKVLAQNKYITDTCLELMVNLFRDVVYKLRFDHNHFDKWKFLKEHATDRDFYQ
RVFLTDMFKVFLEERMKEKTDYWSDLEMKSRGFGHSSLRSSLNSSAYSNRPRRYTLSQIV
PSDKRGTTVLCLKDITDLKIHVKNTILQITKAMEHSDDYDDNTSLQYLRALFYCADNDNM
AAMQDFIDLSITNIRILPAKVLSDLYNRLTEEENTKFKNLRGHEVILDCIEDTKGREGER
QRIRMDPVEIPDSDLNYIKFEEIVSLKQMSNDYRTIQLLFEALTQEKMTSTSVIEQMTFQ
IFACCWEDNQIQCSQVKLGENILLEEETILKVSTLIKTDFGLGRIGLTDKRLFFLSDVSN
QYKEIVKLREIRDLEQSEYSSLFSRVQTLKIHRKGKGTSPFTAFLKEERNWWYMVIREMW
AGKVVAEAMKDVMMVQHAIQNTLLIDAIIASGQENCTTHSQNTEAAAEKLSHFYCLYREG
KHLLPHDTQDTLQRKIDVNIGERESKTVHTLLYTGGDEHISPRLWCGLSDGRIKVFNAVT
WTLESEIIVELKRCVACLTAVDDNHVWAGAFGIYILDARTLTCTKTLLEHTDLVVDIVLH
DNNRFVYTASLDGTIIKWNAQKLSRAKEKIILKSLPSLRSLKVYKDRLICGSWESIVICD
LEGSVLNTLKVKENETVVAIDSFTVSGNGEVWTGTRRGGKIYILDISTGELKHMITIDKC
KGISSMEEVDGRIWTGTKDGMIYIYDINNRRLWKELQGHDDAVRVLCDIRDRAHVGYSYV
RYMISGGGSMDGRVCIWNATAERLLDSSDEHTLEKIVYEREKNRSSRTAHKK
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtttgtggtgccaaacgcattggctgatgttgtcctgctggttggggttgat
gacaatgtaggattaatacctgttgatgctggagatgtcagtgtgtataatgccctgttt
gagctgaagtatgaagcccaggtgttgtcggcaatcagtggtacagatatggtgaatttc
cacccttttgctcacagagtagacagttacccaccaaacaatacacgagagacgtttgag
catcaagctgaggagatggtaaaagctagggaaagaatgatgagcgatttcagcctgggg
tcaaagaaatcatttcagaacactgaatcaagtccaaagaaaacaacaagaagtatatct
gttagtccaaagatgttgttggcccgtagcatgtcaatgaccattaaacgtcctcgactg
ggagggaacactgtcaacatcgtcccagaacttccaatcagtgatgaggtcataaactca
atatcaacattctgtttcccagatggtctaaagatacatgagcgtaagccagagagtaca
actcacttctttgtactgactgatatatcaggacgtcggtcttacacaacttgtctcact
ttctacagacccttttctgttgaaaaggatgatcagggcaatgcgtacatcaaccttgac
cttgcggaacaagagcattcagatgacgacaaaatgaggtgttatattccacagtgtttt
gtaatcatatcaaagtttccatattatactacaatgaaagaatgtctatctagtatgtta
tcatatattgaaaaggaccctgaagagatgacaacatttctcaaggaatatgctaatgta
attacgcatacccctgtgccccctgctggaaatctagctgtgaatttcagattgtacaac
ttaaatgtgacattgatgccccccacccatcctgataaacctgtgatagatcttcagctg
catttgacttttctgtgtttcaatgctgaagagttcctgagaatactctcctgtgtgcta
gtggaggagagaatagtattcctgtcatcaaattatgctcttcttacactaattatggag
tctgtgatgaacctagtcctaccattcaagtggagatttacctactcaacgattctcccg
tcctcagcattagggtatttagaatctcctggcacctttatgtatggagtacattctaga
cataaagaggaagttgaacaggtggaaggtcttattttggtagatattgatgaaggcaca
gtatttattccggaacaagattgtcaagctacacacgtaaagcagaacggatacccacct
acatcttctgtaccaaacctaccctccgaaatggcaacagtatttaaaaacaaatggtct
catctgaagctgcaatttgatcttcttgacactatcagaccatttagctacaacatagag
cagatgagagaagacagaaagaaaaaagtccttgcccagaataagtacattacagatacc
tgtctagaactcatggtcaacttatttagagatgttgtttacaagcttcgatttgatcac
aatcattttgacaagtggaagtttctgaaagaacatgcaacagacagagacttctaccag
cgtgtgtttctgacagacatgttcaaagtatttcttgaggaacgtatgaaggaaaaaaca
gactattggtcagaccttgagatgaaaagtaggggatttggtcattcgagtttaagatct
tcgttgaacagttctgcgtattcaaataggccaagaaggtacacgttgtcgcagattgtt
ccatctgataaaaggggaaccacagttctctgtctgaaggatatcacagacttaaagatt
cacgtgaagaatactatactgcagatcacaaaggcaatggaacattctgatgactatgat
gataacacgtcactacagtatctacgggcattgttctactgtgctgacaacgataacatg
gcagccatgcaagattttattgatctatccatcactaacatcagaattttacctgctaag
gttctttctgacctgtataacagacttacagaagaagagaatacaaaatttaagaacctt
agaggacatgaagttatacttgattgtatagaagacaccaaaggtcgtgagggagaacgt
caaagaatcagaatggatcctgtagaaattcctgattctgacttaaactatataaagttt
gaggagattgtctcactgaagcaaatgtcaaatgactacaggacaattcagttattgttt
gaagctctgacacaagaaaagatgacttctacatctgtgattgagcagatgacgttccag
atatttgcttgttgctgggaggacaatcagattcagtgcagccaagtcaagctgggtgaa
aatatactgttggaagaggagacaatactgaaggtctcgacgctgattaaaacagacttt
ggtcttggaaggataggacttactgataaaaggttattttttctgagtgacgtttcaaat
cagtacaaagaaatagtgaagcttagagaaatcagggatctagagcagtcagaatacagc
agcttgttcagtagggttcaaactctcaagattcacaggaaaggaaaaggaaccagtcct
ttcacagcttttttgaaggaagaacgtaactggtggtatatggtgatcagagagatgtgg
gcagggaaggttgttgcagaagcaatgaaagatgtgatgatggttcagcacgctatacag
aacacattgctaattgatgccataattgcaagcgggcaggaaaattgcactacacacagt
cagaacacggaagctgctgcagagaaactgagtcacttctattgtctatatagggaagga
aaacacctcctgcctcatgatacgcaagacacattgcaaaggaaaatagatgtgaacatt
ggagagagggagagtaagactgtgcatacactactttatactggaggagatgagcatatt
tcacctcgcctctggtgtggtttaagtgatggcaggatcaaggtttttaatgctgtaaca
tggacgctggaaagtgaaataatagtcgaactaaaacgatgtgtggcttgtctaacagct
gtagatgacaaccatgtttgggctggtgcttttggcatatacatcttagatgcgcgcact
ctcacatgcacgaagacactgcttgaacatacagatctggttgtggatattgttttgcac
gataataatagatttgtttatactgctagtcttgatggaactataataaaatggaatgca
cagaaactgagtcgcgcaaaagagaaaataatattgaaaagcttgccaagtttgcgatct
ttgaaggtctacaaggacagactcatttgtggcagttgggaaagtatagtgatttgtgat
ttagaaggatctgtactgaataccctgaaagtgaaagaaaatgaaactgttgtagcaata
gacagtttcacagtgtctggaaacggagaggtatggacaggcacaagaaggggagggaag
atatatattttggacatctcaactggagagttgaaacacatgataaccatagacaaatgt
aaaggcatcagtagtatggaagaagtcgatggcaggatctggacagggaccaaagacggc
atgatctacatatacgatataaataacagaagactttggaaagagttgcagggtcatgac
gatgctgttagagtattgtgtgatattagagatagggcacatgttggatattcgtatgta
aggtatatgatctcaggagggggcagcatggatggacgtgtttgtatatggaatgctacg
gcggaaagattattagactcatccgacgaacacactttggaaaaaattgtgtatgagcga
gaaaagaaccgctcaagcaggactgcgcataaaaaatga
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