Mercenaria mercenaria (northern quahog): 123540197
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Entry
123540197 CDS
T07835
Name
(RefSeq) double-strand-break repair protein rad21 homolog isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmer03036
]
123540197
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123540197
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
123540197
NCBI-ProteinID:
XP_045180949
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Position
16:complement(32706774..32741304)
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AA seq
660 aa
AA seq
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MFYAHFVLTKKGPLARIWLAAHWDKKLTKAHVFETNIDSSVEAIMKPKVKLALRTSGHLL
LGVVRIYSRKAKYLLADCNEAFVKIKMAFRPGVVDLPEENREANVAAITLQENFHDFDAL
EDLHDIDMSAQFSTVNQSRPEEITMKEDLTTISFVGDDSFGDVGFDERELLRDAHFDDTY
LKSPRQDISMQHIEKSHSMIAETSSAPTMDVDLPPLDDGFGGGGFMDIGNDDDDDDNDAD
SFGGGVDQEFLGEDLITGGNLFEDTPAVPPEIPVTTPLPQQKDVPEQQQLAAPLDSMMTA
TPVPGTSGEQTTLITNENEAFALEPLDTTHMPGVERKKRKRKLIVDEQQGIPSETMKMQL
SDTSDIVTTLDLAPPTKKLMQWKETGGFEKLFALPGCAIRSRNILKSIICQDKVAMFKRN
MKTRPSEDFDENEERLELEAPEISREEDRSITEKSKVGMSTIRPEISTIMEESSILETSK
RSRRSDESIPEPPAPKTPRHSSSAHEQQPNVSDIFGQSVIEPQIDLPEVPSLIQPHYEDE
GPPSIAPFSVGPASVGPPSVGPISFGADVEGGDQMPEDEEQEEQRWTKRTEQMQHTLDQG
FRYTDELSFKDMARKLNRKQVTSKFYTLLVLKKHKVVEVNQTEPFGDILIGKGPKFGMAC
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgttttacgcacattttgtgctgacaaagaagggccctcttgccaggatctggctagca
gcccactgggacaagaagttgaccaaggcgcatgtgtttgaaacaaacattgacagcagt
gtggaagccattatgaagccaaaggtgaagctagccttaagaacatctggtcatcttctg
cttggtgtggtaaggatctactctcgtaaagccaaatacctactggcagattgtaatgaa
gcatttgtcaagatcaagatggcttttaggccgggtgttgtggatctgccagaggaaaac
agagaagctaatgtagctgccattacactgcaagaaaacttccatgattttgatgctctt
gaagatttgcacgacattgatatgagtgcacagttttcaaccgtcaaccagagtcgccca
gaagaaattacgatgaaagaagatttaacaactatatctttcgttggggatgacagtttt
ggcgatgttggctttgacgagcgagaactgttacgagatgctcacttcgatgatacatac
ctgaagagccccagacaagacatcagcatgcaacacatagaaaaatcacactcgatgatc
gctgaaacatcttccgcaccaacaatggatgtagacctgccaccattggatgatgggttt
gggggaggaggttttatggatatagggaatgatgatgacgatgatgataatgatgctgac
agtttcggaggtggagtcgatcaggaattcttaggagaagatttaatcacaggaggtaac
ctttttgaagacaccccagcagtaccacctgaaataccagtgaccactccattaccacaa
cagaaagatgttccagagcaacagcaattagcagcaccattagattccatgatgactgca
acgccggttcctggcacatcaggagagcagacaactcttattaccaatgagaatgaagcc
tttgctctagaaccattagatactacacatatgccaggtgttgaaagaaaaaagagaaag
cgaaagttgattgttgatgagcagcagggtatccctagtgagaccatgaagatgcagttg
tctgatacatctgatattgtaaccacactcgatcttgctccacccactaaaaaactgatg
caatggaaagagactggtggctttgagaagttatttgctcttccaggatgtgcaataaga
tcaagaaatatcctaaagagcattatatgtcaggataaggtggcgatgtttaaacgtaac
atgaagacgcggccgagcgaggactttgatgagaatgaagagagattggaactggaagcg
ccagaaatatcacgagaagaagacagatctataacagaaaaatcgaaggttggcatgtca
actatacggccagaaattagcaccataatggaagaatcttcaatacttgaaacctcaaaa
cgatctcgcagaagtgatgaatctatcccagaaccaccagcaccaaagacaccccgtcat
agttcatctgctcatgaacaacaaccaaatgtttctgatattttcggccagtctgtaatc
gaaccacaaatagatttaccagaggtaccgagtttgatacagcctcactatgaggatgag
ggtcccccatctatagcaccattctctgtagggccggcatcagttggaccaccttctgtc
ggaccaatatcatttggcgctgatgttgagggcggagaccagatgccagaggacgaggag
caagaggaacaaagatggacaaaacgtacagaacaaatgcagcatactctagatcaggga
ttcagatataccgatgaactcagttttaaggacatggcaagaaaattgaatcgcaaacaa
gtcacatcaaagttctatacattgttagttttgaaaaagcataaagtggtagaagtgaat
cagactgaacccttcggggatattctaatcggtaaaggaccaaagtttggaatggcgtgc
taa
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