Mercenaria mercenaria (northern quahog): 123540750
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Entry
123540750 CDS
T07835
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmer03016
]
123540750
03036 Chromosome and associated proteins [BR:
mmer03036
]
123540750
Enzymes [BR:
mmer01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
123540750
Transfer RNA biogenesis [BR:
mmer03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
123540750
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123540750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
123540750
NCBI-ProteinID:
XP_053399349
LinkDB
All DBs
Position
1:complement(42844241..42887541)
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AA seq
1447 aa
AA seq
DB search
MEKSTVIGTLFQQSSLKVEEVCHSLINSIQSNLDQGFKFEEISSYSHNLAVLKDLLCCNG
AVENRKDAKQKGKDEDLQTNENLADIKLNIVEKICLPLLGHLFPSSDSRPEVQVLLGVTG
QLVAVCVKNNDGTFHSVLEYIEMNIEKFENAKPTNFDMQHDRAIVDIHTILEVMRHVINS
VAGVKNVDDQILARLKSIFTKLTESLEYISVELIGSASVPVLLKIMKVDCRNAPHYLDFI
WKYIQNFSQLNDRRKQFLLLCGFANYFFPVNGEVKCVDIKQKEEFWEILQSGLYSKDSVN
RKRSLYLLKRIVDICESTLTDVNTEAAQPIFWWSRDRSPELSKTWQDFMLLAEVLEEKQV
HVIRPLLPRMKLLVKASEMPPGKGQPLLHTSWLKTILLRSSYHESLQIIRWSAETVLSLD
LSKCPMIEQGLDQYLAGPMLYSLQEPKLYVRESGSPLGTMPAIAEKLVNFFTTCWDVMSP
ENKGSFFCRTVKNISSRHWGPIALLFICRGLARVPPTPCLDRNTVLELRKLLTGFLVAVD
TYFRGTIQGYLVQILIKFTDKSTVLLEDFIQILCLVRREESLQRGTALWTQCVTWFEEGG
PKKSEWDPEGMRQYIESSVTKYLQTSLDSKYSTADSAAAVMVARLLLLASDASIATELDD
NNSSTLIKVTQMLATVLNSINTHAYMSTHKADKALLLLILLMKESKPKGEIQDDQVVKVI
HSAVESCQSEILVYVGRQISDSIISVSDMSHLELYVDCVQVLAESASTMRSVQFDRLVDT
CVAILNKPSEMMDLQNKLQHLSAVCILGTLSSFCHMIKHGNDINFTKPSGDQRLSQQEWG
KISSLFLENEWQVVEMALQHSAAPWCDMLELLALAEDTLSVGVTTTSVIVLKCLRMIIPQ
VKDLVSGERLVSILGTCWFSFQEARRIVAFWDVLEAFVQAAFQPCLLQMAEDSPVIVCLT
EYAEQLMETGKDKNGVVNALATQLCTVWSENGMMLQAGKFVTVIVDLCMFGALIRRGVRY
EIIMPHFEEGGVYCFADVSRSVSLSVCRPIGFWMITQEFQYRESKNLTLCSLLCIVIHMG
PHHPPDEQTEYFKQAIPNILPWCMAHHFHTRIYSQAVLAKLWDQCQQLGLHMILKENAIL
NCIVDFSQQNRNSTRNVKKLLDSFFFKFLDFERDFTLETIYKIVSKMTSLTEEDWIQPEQ
FIQNSSIWNDGAGSSYIQLRNISRGFEQCDPGLWKYISLKNPADDDAVDETVADDTESDV
QKKIMPWRQMMLDEETMSEVDHGVKQHIEGGLVVVTSLINKIPNLGGLCRTSEIFGVSEY
VMGKMGYKDDKAFQGLSVTAHKWIPITEVHETKLADYLQQKKQEGYTLVGVEQTANSVCL
TEYTFPEKTLLLLGNEKEGIPVELISLLDVCVEIPQQGVIRSLNVHVSGAILIWEYRRQQ
LMKSCSS
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagtactgtcatagggaccttattccagcaatcatcactcaaagttgaagaa
gtatgtcacagtttgatcaacagcatacaaagtaatcttgatcaaggttttaaatttgag
gagatttcttcatacagtcacaatctagctgtgttgaaagatcttttgtgctgcaatgga
gctgttgaaaataggaaagatgcaaaacagaaaggcaaggatgaagatctccaaacaaat
gaaaatcttgcggacataaagttgaatattgttgagaagatttgtttgccattgttaggg
catttatttccatcttcagattcaaggcctgaggttcaagttttgttaggagtaacagga
caactggtagcagtttgtgttaaaaataatgacggaacatttcatagtgttcttgaatat
attgaaatgaacattgagaaatttgaaaatgcaaagccaactaattttgatatgcaacat
gatagagccattgttgatatccacaccattctagaagttatgagacacgttataaactct
gttgcaggtgttaaaaatgtagatgatcaaattttggcacggttaaaatcaatttttact
aaactcactgaaagtttagagtatatttctgttgagctgataggtagtgccagtgttcct
gtgctactgaagattatgaaagttgattgtagaaatgctccacattatcttgactttatt
tggaaatatattcaaaatttctcacagttaaatgatagaaggaaacagtttctgctactc
tgtggctttgcaaactatttcttcccagttaacggagaagttaaatgcgtagatatcaaa
caaaaagaagagttttgggagatacttcagtctggtttatatagcaaagactcggtgaac
cggaaacgttctctgtatttgttgaaaaggatagtggatatatgcgaaagtacgctgact
gacgtaaatactgaggctgctcagccgatattctggtggagtagagatagaagtcccgaa
ttgtcaaaaacatggcaagattttatgctgttagctgaagtcttggaggaaaagcaggta
catgttattagaccccttttaccaaggatgaaattacttgtgaaggcctctgaaatgcca
ccaggaaaaggtcagcctttattacatacctcctggttgaaaacaatactgttaagaagt
tcctaccatgaaagtttgcagatcatccgatggtcagctgaaacagttctctcccttgat
ctctccaagtgccctatgatagaacaaggtttggatcagtacctggctggtccaatgttg
tattcactacaagaaccaaagctgtatgttagagaatcagggtccccacttgggactatg
ccagctattgccgagaagcttgtgaatttctttaccacatgctgggatgtcatgtcacct
gaaaacaaaggttcctttttctgccggacagtcaagaacatttcttccagacattggggt
cctatagctttacttttcatctgcagaggtttagctcgggttccgccaacaccttgtcta
gataggaacacagtcctggaattaaggaaattattgacaggctttctagttgccgtggat
acatatttccggggaacaattcaaggttatttagtgcagatattaatcaaatttacggac
aagagtacagtactgctagaggactttattcagatcttatgtctggtcagaagggaggag
agtttacaaaggggaacagctctatggacccagtgtgtcacatggtttgaagaaggtgga
cctaagaaatcagagtgggaccctgaaggaatgagacagtatatagaaagtagtgtcact
aaatatcttcaaaccagtctagattccaagtacagtactgcagattcagctgcagcagtg
atggttgctaggttactgttgctggcctcagatgcctccatagcaaccgagttggatgac
aacaattcaagcaccttaatcaaagtcactcagatgcttgcaactgtattgaactccatc
aacacacatgcctatatgtctactcacaaggctgataaggctctcttactgctgatactg
ttgatgaaagagtcaaagcctaaaggtgaaatacaagatgaccaggttgtgaaggtgata
cattctgctgttgaaagttgtcagtcagaaatactggtgtatgtaggcaggcaaatatct
gacagcatcatttctgtatcagatatgagccatctagaattgtatgtagactgtgtacaa
gtattggctgagtcagcgtctacaatgagaagtgttcaatttgacagactggtcgatacc
tgtgttgcaattctcaacaaaccttcagagatgatggacttgcagaacaagttacagcac
ctgtctgctgtgtgcattctgggaactttatctagcttctgtcacatgatcaaacatgga
aatgacatcaacttcacaaagccttcaggtgatcagaggttgagtcaacaagaatggggc
aaaatcagttccctcttcttggagaatgaatggcaggttgttgagatggcactacaacac
agtgctgcaccctggtgtgacatgctagagttactggccctggctgaggatacattatct
gttggtgttacgacaacatctgtgatagtactgaagtgccttagaatgattataccacag
gttaaagacttggtgtcaggagaaaggctggtgtccatattaggaacatgttggttcagt
ttccaggaggcacgtaggatcgtggcattctgggatgtattggaagcttttgtgcaggca
gcattccagccatgtctgttacagatggcagaagattcccctgttatagtgtgtcttaca
gagtatgcagaacagttgatggagactgggaaagacaaaaatggcgtggtgaacgcactt
gccactcagctgtgtacggtatggtctgaaaatggaatgatgctgcaagctggcaagttt
gtcacggtcattgtagacttgtgtatgtttggtgcacttattagacgaggtgtaaggtat
gaaattattatgccccacttcgaagaaggaggggtatattgttttgcagatgtcagtcgg
tcggtcagtctgtcagtatgtagaccaattggtttctggatgataactcaagaatttcag
tacagagagagtaagaatctgacactgtgctcactgttgtgtatagttatacatatggga
cctcatcatccacctgatgaacagactgaatacttcaagcaggctatacccaacatcttg
ccatggtgtatggcccatcatttccatacaaggatctactcacaggcagtgctagccaaa
ctctgggaccagtgtcagcagttgggtctacacatgattttgaaagaaaatgctatactt
aactgtatagtagacttcagtcaacaaaatagaaattctactagaaatgtaaagaaactg
ctggacagcttctttttcaaatttcttgactttgagagggattttacacttgagactata
tacaaaatagtgtcaaagatgacctcgcttacagaagaggactggatccagccagaacag
tttatacagaacagttctatatggaatgatggggctggttccagttacattcagctacgc
aatatttccaggggctttgagcagtgtgacccaggcttgtggaaatacatcagtcttaag
aatccagcagatgatgatgcagtagatgagactgtagcagacgacacagaaagtgatgtt
cagaagaagataatgccatggcgacagatgatgttagatgaggagacgatgtcagaagtt
gaccatggcgttaaacaacacatcgagggaggactagttgttgttacctctcttatcaat
aaaattccgaatttgggaggtctctgtcgtacaagtgagatatttggagtatcggagtat
gttatgggcaagatggggtataaagatgataaagcattccagggacttagtgttacagct
cataaatggatccctatcactgaggtgcatgagacaaagttagcagattatttacagcag
aaaaaacaggaaggttatacactagtgggtgtagaacagacagcaaatagtgtgtgtctc
actgaatacacattcccggagaaaactctcttgctgcttgggaatgagaaggagggtata
cctgtagaattgatcagcctgttggatgtgtgtgtagagatacctcagcaaggtgtgatt
aggtctttgaacgtacatgttagcggtgccatacttatctgggaatatagacgccagcag
cttatgaaatcatgtagtagttga
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