Mercenaria mercenaria (northern quahog): 123540837
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Entry
123540837 CDS
T07835
Name
(RefSeq) vacuolar protein sorting-associated protein 54-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmer01009
]
123540837
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123540837
Protein phosphatases and associated proteins [BR:
mmer01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123540837
Membrane trafficking [BR:
mmer04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
123540837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Nup49_C
Motif
Other DBs
NCBI-GeneID:
123540837
NCBI-ProteinID:
XP_045182088
LinkDB
All DBs
Position
1:complement(42492197..42546483)
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AA seq
963 aa
AA seq
DB search
MIRPQTKVSSGHWTRCDFCKEKINFKSPREFCRHLRDFHCTREGGSYVCKYGKNNVCLSL
PVDGVSDLDYEEHIMREHVNQSAEGTNSALQRLHANAQRQTSNPEPSVVQDQHKWTVFNS
KVNLPAALNDPRLVKRETDFFTKTWGVDFYEKSYLPSSPYVQEISRGHFQSYINRTSERF
KKHSRELQAVVEGKGPETHLTKMVRQAEKNRTELEQIPKLFLLPNFNLENLDTFNAVFPW
TQVEESKINQPGTRQSSKLLQEKLSHYLDIVEVQIAQQISRRSEAFFHAMTSHDELQEKM
KVTCARIKYLRDKINNMDTMMAKESLKVLKLTKSRSSYVHLHNKLKLMATVHQTQPTIQT
LLSTNEFVGALDLISTTQEVLSQELAGVHSLRHLGSQLAELQKLIDIMIQEEFHKHVTSE
LNRPISDSTPLLDEEKLVATLFGMLRLQKFQFLDVYRDETFTGMKAVVKQTVIEAVCAAD
DIDTDDNNISLADQMRLLNYTQWTELMKNIFQNLLVVLKRAKAFHGIVVDVLGIAAGKTK
IPTPLQSPTEETNGLLEEPKHLNVSVSDDVDVMISIDDYNKTMGGLRELLNSVCDHAHDR
CVKVVTARAKDGFLERLSSSEFVALSKEVEKFVCLCEEVTGRRSMSLRGSLQSQANRFIN
RFHEERRTKLSLILDNERWKQADVPTEFQDLVYHISNTGQLCVPETKTEIERSPGEYLTV
GGENYAVVGTVLLLLKMVIEYCQCADDIPAVSADLLTRLVDLLKIFNSRTCQLVLGAGAL
ELVGLKTISTKNLALASRCLQLVVRYMPMVRKHFEDKLVNNKSINMLKHFDQILKDYQDH
IDEISNKLVTIMESMVDSQLSRWEVKAPMPSSCFRAICKQMAKMHEAIIDILPQEQVKAI
FSRINQTFKKVLRQQLIHLNVTNNGGPQHGLVTSDLTFYAGSFKTLRGLEDLAQDVHDVW
DKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgattcgaccacagacgaaagtctctagcggtcattggactcgctgcgatttctgcaaa
gaaaaaatcaatttcaagtcgccgcgagaattttgccgtcatttgagggacttccattgc
accagagaaggtggctcgtatgtctgtaaatacggaaaaaataatgtttgtttatcattg
ccagttgatggagtgagtgacctggactatgaggaacacatcatgagggagcatgtgaac
caaagtgcagagggaacaaactcagcactacagaggttacatgccaatgctcaacggcaa
acatcaaatcctgaaccttcagttgtacaagatcagcacaagtggactgtctttaattca
aaagtcaacttaccggcagcattaaatgatccacgactcgttaaaagagaaacagacttt
tttacaaagacatggggagttgatttctatgagaaatcttacctcccatcatcaccttac
gttcaggaaatcagcagaggacacttccagtcctatattaacagaacttcagagagattt
aagaaacacagcagagaattacaggctgtggtggaagggaaaggcccagaaacacattta
actaaaatggtcagacaagcagagaaaaacagaacagaactagagcagattccaaaattg
tttttattaccaaattttaacctggaaaaccttgacacctttaatgctgtgtttccatgg
acacaagttgaggagtcaaagataaaccagcctggaaccagacagtcatcaaagttgttg
caggaaaagctaagtcattacctggacattgtagaagtacagattgcccagcagatatct
cgtagatctgaggccttctttcatgctatgacatcacatgatgaactgcaggaaaaaatg
aaagttacctgtgcaaggatcaagtatctcagggataaaatcaacaacatggatactatg
atggcaaaggaatctttaaaggttctaaaactgacgaagtcacggtccagttatgttcac
ctgcataataagttaaaattgatggccactgttcaccagactcaaccaaccatacagact
ttgttgtcaaccaatgagtttgtaggggctctagatctcatctcaactacacaggaagtt
ctctctcaggagctggcaggtgttcacagtctaagacatttagggtcccagctagcagag
ttacaaaaactgatagatattatgatacaagaagaattccacaaacacgtaacatcggag
ctgaaccgacctatatctgattcaacacctttgctagatgaggagaaacttgtagctaca
ttatttgggatgttgagacttcagaaatttcaattcctggatgtatacagggatgaaaca
ttcactggtatgaaggctgtggtaaagcaaactgtgatagaagctgtatgtgcagcagac
gacattgatacagatgataacaatataagtttagcagaccagatgagattattgaattat
acgcaatggacggagctaatgaaaaatatattccagaatttattggttgtactcaaaaga
gcaaaggcattccatggtatagttgttgatgtacttggtatagcagcaggtaaaacaaag
attcctacaccattacagtcacctactgaggaaaccaatggtctgttagaggaacctaaa
catttaaatgtctctgtaagtgatgatgttgatgtgatgatctctatagatgactacaac
aagacaatgggtggtttacgagaacttcttaattctgtatgtgatcatgctcatgataga
tgtgttaaagttgtcactgcaagagctaaggatgggtttctggaaaggttgtcctcttca
gaatttgtagctttatcaaaagaagtggaaaagtttgtttgcctctgtgaagaagtaacc
ggacgacggagtatgtctttgcggggcagtttacaaagccaggcaaacagatttattaac
agattccatgaagaaagaagaacaaaattaagtttgattttggacaatgaaagatggaaa
caagcagatgtgcctacagaattccaagatcttgtttatcatatatctaacactggtcaa
ttatgtgttcctgagactaaaactgaaatagaaagaagtcctggtgaatatcttactgta
ggtggtgaaaattatgctgttgtagggactgtgttattactgctgaaaatggtgatagaa
tattgtcagtgtgctgatgacattcctgctgtgtctgctgaccttctaactaggctggtt
gatcttcttaagatatttaattcacggacatgtcaactggtgctaggggctggtgcattg
gaacttgtaggccttaaaactatatctaccaaaaatctagcattagcatcccgatgttta
caactagttgtacgttatatgccaatggtcaggaaacattttgaggataaactagtcaat
aataaaagtatcaatatgcttaaacattttgatcaaattttaaaggattatcaggaccat
atagatgagatctcaaataaactagtcactataatggagagcatggtggattcacaatta
tcaaggtgggaagtgaaagcacctatgccctcatcatgtttccgtgcaatctgtaaacaa
atggcaaaaatgcatgaagccatcatagacattcttcctcaggaacaagttaaggcaata
ttttcaagaatcaatcaaacatttaagaaggtgttaagacagcaactcatacaccttaat
gtaactaacaatggaggaccacaacatgggctggtgacatcagatctgacattctatgct
ggcagctttaaaactctcagaggccttgaagacttagcacaagatgtacatgatgtgtgg
gacaaaagatga
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