Mercenaria mercenaria (northern quahog): 123541365
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Entry
123541365 CDS
T07835
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
mmer
Mercenaria mercenaria (northern quahog)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_14
LRR_8
PDZ_6
LRR_4
PDZ_2
LRR_1
LRR_LRWD1
LRR_9
LRR_13
Rap1_C_Sp
DUF6288
RdRP_4
Motif
Other DBs
NCBI-GeneID:
123541365
NCBI-ProteinID:
XP_053382327
LinkDB
All DBs
Position
16:22512505..22733409
Genome browser
AA seq
1767 aa
AA seq
DB search
MFKCIPIFKACNRQVEWIDRRHCNLQSVPDDVMRYTRSLEEVFLDANSIRELPKNFFRLV
QLRKVTLSDNEIGKLPHDVAQLVNMVELDISRNDIGEIPENIKFCKNLQVLDISSNPLVT
PLPSGITQLRNLTHLGLNDVSLSWLPKDIGSLSSLVSLELRENMIRQLPASMSFLVKLES
LDLGSNELDELPDTIGSLPALQELWLDCNDLAELPPALGNLKKLTQIDVSENVLEFIPEE
ISGLSNLTDLCLSQNNLERLPEGIGQLKKLGIMKVDSNRLTELTPQIGYCESLEELILTE
NLLSELPNTIGKLKKMTNFNVDRNRLTEIPVDIGKCQRLDILSMRDNRLLRLPQELGNLK
DLHVLDVSGNRLEYLPITVTNLNLRALWLSENQAQPMLKFQTDFDERTGQKVLTCFLLPQ
QAFHTESMENLLQGSIATDRDSRLSWKDEKPEKVRESVIRFAESDKDEEEESGDEDFEKP
FVRHDTPHPRDLRGKHPKFKATKGIDGHVIPHHEQKNQVSSFVPMRDSSADIEIEIPPPP
KREKPPVPERKSSVRDESVLRAPELETKRLDSEPRPYFGGKEEEEYEEEPPKESQPLLRE
VTIVTTTTTIPQVAAEMEHDDDADEEEEEEENEEEEEGDEGTDEADQEGEHEVEESQEED
EDMEDDDYTYQERTVGFTQDFDFDEDERKTPLRRRDTPHHKKGKRIVISDDAKDRVLEIL
AKTSQKEQEEQEIIEEEYTINIHREPGQGLGISIAGGKGSTPYKGEDESIFISRVSDDGP
AGLAGIKVGDKLMSVNGIVLHDSDHYEAVDVLKSSGNDITMVVGRETIVIRKAEDEEEED
EVTEEQIQAQDDVTTHLEAEKATEPVMAEPVMAEPVMAASFATVTFEPEPGTDVYGEKLE
TVLYRDAGGLGFSIAGGRGSVPYKGNDNLHQSDDPSRNRAIYISRIVEGGQAARDGKLQV
GDKILSINGVDLTDARHDQAVSLLTGVDREIKLVVYREKIVDKEEAAREPPKGDKVVNFS
QPRIIWNKTVATTIPAETITFSPTAPVHTDEITVDVSHQNESASPPSASPKTPESPPPLP
LAPAPVITPQAHELPSPYASAIPSSYNYPSQSSPPAQTMNQVASPSLSPRTLSSDWNSPP
AAIQPPKFQYPGFNRPGSRTSGSERKDSATKKDSSNMNNVSPLSNSIPYSVNSVNINNNT
SSDKETDSGHRTVTLEKQTIQMTKPPPPVEPVANHVDSYVDSKYPLEDCVIVKAGGPLGL
SIVGGSDHSSSPFGEDEPGIFVSKIVPDGAASRTNLHIGDRILEVNGKDMKNATHQEAVM
ALIAPTYEIRVKVRHDPPPKGLQELTVVKRPGEKLGMSIKGGVKNFPGDESNDEGIFISR
ITDDGAVSRDDRLKVGQRILEVNGQSLLGSTHQEAVRALRSVGDRLVIMICDGFDPASLD
EPSPDTPSSPLGYIPQMRKDSATNIDREDAEHLLLKKEQELVKETLQWEKEELARLEKQR
LEREEQAKQVEEQAKILQLEHEQIKGPELPQQTVIAPKVPQESPAPCTAPSEQLLVKPTP
PVYGGSKPIAREGGSFNTKKRFFEMEMHEQNKVDKTQAKPFRYFSEHELAKMRKEEADKA
LRMSKEELLTKVSESVGSGDEEYNKVLSSPPNVMRTLDPSKAHTPPNNVQSTPGSLQGHK
LSPAEERALQAEQRAASRQARMKDLEDDAIRAQAVIAKAQELQNDDGKSTKAASNQNGES
EVEVTKRQIIELNLDDSSPMNSSNESR
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagtgtattccaattttcaaggcgtgtaatcgccaagtagagtggatagaccgg
agacactgcaacctacaatcggtccccgacgatgttatgcggtatacccgatcgctggag
gaagtatttctagatgcaaacagcatcagagagttaccaaagaacttctttcggctggtt
cagctgcgtaaagttacgctgagtgataatgaaatcggtaaattaccgcatgatgtagct
cagctggtcaacatggtcgaattggacatcagcagaaatgatataggagaaatcccagaa
aatataaagttttgcaaaaatttgcaagtccttgatatcagcagtaatcctctagtcaca
ccgttaccttctggtataacacagttacgaaacttgacccaccttggtctgaatgacgtt
tctttgtcatggcttccaaaggacattggcagtctgagcagcttggtctcactagaatta
agggagaacatgatacgacagttaccagcctccatgtctttccttgtaaagttagagagc
ttagacctgggtagcaatgaactagatgagctgccagacacgataggttccctaccagcg
ctacaggagctgtggttagactgcaacgaccttgctgaactacctccagcgttgggcaac
ttgaagaagttaacacagattgatgtatcagaaaatgtgttagaattcattccagaggag
atatcgggtctctccaaccttactgatctctgtctttcacaaaacaatcttgagcggctt
ccagaaggaattgggcaactgaagaaacttggtataatgaaggtagattccaaccgactc
acagaattaactccgcaaattggatactgtgaaagtttagaagaattgattttaacagaa
aacttgttatctgaattacctaatacaataggaaagttgaaaaagatgacaaacttcaat
gttgataggaatagactcactgaaattccagtagatattggtaaatgtcagcgactggat
attttatcaatgcgagacaatcggttgctacggttaccacaagagcttggtaacctcaaa
gatttgcatgtgttggatgtttctggaaacaggttggagtatttaccaatcacagtaaca
aacttgaacctccgtgcactctggctgtcagaaaaccaagctcagccaatgctcaaattt
cagacggactttgacgagcgcacgggtcagaaggttctcacatgcttcttacttccacaa
caggcattccacactgaaagtatggagaatcttcttcaaggcagtatagcaacagatcgt
gatagtcgtctcagctggaaggatgagaaaccagagaaagtacgtgaaagtgtgatacgc
ttcgcagagtcagacaaagatgaagaagaggagagtggagatgaagacttcgaaaagcca
tttgtacgtcatgacacaccacacccgagagatttacggggaaaacatccaaaattcaag
gctacaaagggtattgatggacatgttataccacatcatgaacagaaaaaccaggtgagc
tcatttgtgccaatgagggacagcagtgcagatattgagatagaaattcctccaccccca
aaacgtgagaagcctcctgtacccgagagaaagtcttcagttcgggatgagtcagtttta
agagctccagaattggaaacaaagcgactggactcggaacctcgtccatattttggtgga
aaggaggaggaagagtatgaagaagaacctccaaaggaatcacaaccattgctacgtgag
gttacaatcgttactacaaccactaccataccccaggtagctgcagagatggagcatgat
gatgatgctgatgaggaggaggaggaggaggagaatgaagaagaagaggagggtgatgaa
gggaccgacgaggcagatcaggagggggaacatgaggttgaggaaagtcaagaggaggat
gaagacatggaagacgatgattacacgtatcaggaaaggactgtaggttttacacaggat
ttcgatttcgatgaagatgaacgtaaaacaccacttcgtaggcgagatacaccccatcac
aaaaaaggcaaaaggattgtcatatcagatgatgcaaaagatagagtcctggaaattctg
gcaaaaacatcacaaaaggagcaagaggagcaagaaattatagaagaggaatacacaata
aatatccacagggagccgggacagggtctagggatcagtatagctgggggtaagggctca
accccatacaagggtgaagatgagagtatatttatttcgagagtttcggatgatggtcca
gctggtttagcaggaataaaagtaggagacaaactgatgtctgtaaatggtatagttctt
catgactcagatcattatgaggcagtcgatgtattgaagagcagtggtaatgacattaca
atggttgttggccgtgaaacaattgtcatacgcaaggcagaagatgaagaggaggaagat
gaagtaacagaagaacaaattcaggctcaggatgatgtgactacacatttggaggcagag
aaggctactgaacctgtcatggctgaacctgtcatggctgagcctgtcatggctgccagt
ttcgcaacagttactttcgaacctgagcctggaacagatgtttatggtgaaaagttagaa
actgtgttgtatagagatgctggtggccttggcttcagtatcgcaggtggcaggggttct
gtcccatacaaaggaaatgataatttacatcagtctgatgatccttctagaaacagagca
atttacatatctcgtatagtggaagggggacaggctgcccgggatggcaagttacaagtt
ggtgataaaattctctcgataaatggtgtggacctaactgatgcaagacatgatcaggca
gtcagcttgctaactggtgttgatcgtgaaatcaaacttgttgtttaccgagagaaaatt
gttgacaaagaggaagcagcacgtgaacctccaaagggtgataaagtggttaatttttca
caaccaaggattatttggaataaaactgtagctacaactattccagcagaaacaattaca
tttagtccaacagcaccagttcatacagatgaaattacagtggatgtttcacaccaaaat
gagagtgcttcaccacccagtgcatcacctaagacccccgagtctcctccaccacttcca
cttgccccagccccagttataacgccacaagcacacgagttaccatctccctatgcatcg
gctatcccttcatcctacaactatccatcccagagttctccccctgcacaaactatgaat
caagttgcgtcgccatcactgagccctcgtactttatcgtcagattggaattcaccccca
gctgcaattcaacctccgaaattccaatatccaggttttaatcgccctggatcacgaact
tctggttcggaacgtaaagacagtgcaacaaaaaaggatagttctaatatgaataatgtt
tcgccattatcaaatagcataccttactctgttaatagtgtaaatataaacaataataca
tctagtgataaagagacagactctggtcatcggacagtgaccttggaaaaacaaactatt
caaatgactaaacctccacctccagttgaaccagtggccaatcatgtagactcttatgtt
gatagtaaatatccacttgaagactgtgttatagttaaagcaggcggaccattaggttta
agtattgtaggtggtagtgatcattcaagttctccatttggtgaagatgaaccaggaatc
tttgtttcaaagattgtacctgatggggcagcatcaagaaccaacctacatataggtgat
agaatcctcgaagtgaatggtaaagatatgaagaatgcgacacatcaggaagctgtcatg
gctcttatagctccaacgtatgaaataagggtcaaagttcgacatgacccaccacctaaa
ggcctacaggagctgacagtggtgaagagaccaggtgagaaattaggaatgtccatcaag
ggaggagtgaaaaatttccctggtgacgaaagcaatgatgaaggaatatttatatccagg
atcacagatgatggggctgtgtcgagagatgacagacttaaagtaggtcagcgaatactt
gaagtaaatgggcagagtcttctgggttccactcatcaggaggctgtgcgagcgctgcgc
agtgttggagaccgcctagttattatgatctgtgatggttttgatccggcttcactggat
gaaccatcaccagatacaccaagctcgccgctcggatacatcccacagatgagaaaagat
tcggcaaccaacattgacagggaagatgctgaacatctccttcttaagaaggaacaagaa
cttgtgaaggaaactttacagtgggagaaagaggaactcgcacgtctggagaagcaaaga
ttagaaagagaggagcaggccaaacaggtagaggagcaagccaaaattctccagctagaa
catgaacaaatcaaagggcctgaacttcctcaacagactgtgattgcccctaaagtgcct
caggaatcccctgccccatgtacagcccctagtgaacagctgctggtcaagcctacccct
ccggtatatggcgggtcgaagcctattgcgagagagggtggttcatttaatacaaagaag
aggttctttgaaatggaaatgcatgaacaaaataaagtggacaaaactcaggccaaacca
ttcagatatttttcggagcatgaacttgctaaaatgagaaaagaagaagctgacaaagca
ttgagaatgtcgaaggaggagctattaacgaaggtgtccgagtctgtgggcagtggtgat
gaggaatacaacaaagttctctctagtcccccaaatgtgatgcgaacactggacccctcg
aaggcccatacccctccaaataatgtccagtcaacacctgggtcgctgcaaggtcataag
ttatcaccagcagaagaacgggccttgcaggctgaacaaagggccgcctcacggcaggct
aggatgaaggatttagaggatgatgcaatacgagctcaagctgtcattgctaaagctcaa
gaacttcagaatgatgatggtaaatctaccaaggcagccagtaatcagaatggtgaatct
gaggtggaggttaccaaaagacaaataatagagctcaacttagatgatagttctccaatg
aatagttcaaatgaaagtcggtag
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integrated database retrieval system
