Mercenaria mercenaria (northern quahog): 123541405
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Entry
123541405 CDS
T07835
Name
(RefSeq) vitamin D3 receptor A-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123541405
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmer03310
]
123541405
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
123541405
Nuclear receptors [BR:
mmer03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
123541405
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
S-AdoMet_synt_N
PhoU
Motif
Other DBs
NCBI-GeneID:
123541405
NCBI-ProteinID:
XP_053382221
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Position
16:18522070..18536357
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AA seq
674 aa
AA seq
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MNEELSNILEQALQYASPLPVMSSTENIATDSPEDAGKSNLLLQHTGSSYLEHLCAISMD
ADEEGTVLLSNSSLNTHQNTHGSQPSHFPLIKSPEENFPDECHSNQGNSFYQLGFANHCI
ESLDQSNTAFDNREKEFAHIEIHVTEDSVDSDFAQLEPATSLTEIHPDSTSDVINDIHDI
ADACLRFENESKPSADSTVSTGKDDVKPKVKKRRRREKNPDPPPPPILPPCDICNKTSSG
YHYGANTCEACKGFYRRTLKKKEVDYKCKCTPDEKEAWKRGPFQNGCPACRYEKCLEVGM
SKNAIKIGRYTLNHKTRNIKKIKSIETIDNLITALTETVSDSSPVSASGLDEEVSRSPSA
SPVDISELSIGSSSTSLDSFQSINALITSPKETRNPGISLKEIDCIVKTLTEAHTTLIVD
DRANIPTETIKKKQDEYLEKYRLKMELFGSMRNITHDEFKEFYNATGIDIDGRLERADTA
FKYFEDKIAMVVAFAKAIPGFKELGLDDQANLIKASRVETSLICAYKNTMRNLDMEKRVV
TLPWGASLHLDELGKFLPMEHLNARFQFAKQLADLNLSVQEECIIRAILTLFTDRCKLEE
PEKVDTLQEKMVMCLQHLINIRPGGSGTLLYKIFNIITNLRELTDKEMEYAKNLLVEWPM
LNLNSYHLVREFLG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggaattgtcaaatatattagaacaagcgttacagtatgcatcaccacttccg
gtgatgtcatcaacggaaaacatagcgaccgactcgccggaagatgcaggcaaatccaat
ttgctgcttcagcatacaggtagttcatatttggaacatttgtgtgctatttctatggac
gcagatgaggaaggtactgtcttgctgtcgaatagctcattgaatacacaccaaaatacg
cacggatctcagccttcacatttcccgctcattaaatctccagaagagaactttcccgat
gagtgccatagcaaccagggtaattcgttttatcaactagggtttgcaaatcattgtata
gaatctcttgatcaaagtaatacagcatttgacaatcgcgaaaaagagtttgctcatatt
gaaatacacgtcactgaagattcggtagattcagactttgcacaactggaaccagcaacg
tcattaacggaaatacatccagattctacttctgatgtgataaatgatatccatgacatt
gctgatgcatgcttacgattcgaaaacgagtctaagccttcagcggacagcactgtgagt
accggaaaggatgacgtcaaaccgaaagtaaagaaaagaaggcggagagaaaaaaatcca
gacccacccccacccccgatacttcctccttgtgacatatgtaacaaaacatcatccgga
taccactacggagcaaatacttgtgaagcctgcaagggattttatcgacggacgttgaag
aaaaaggaagtggattacaaatgtaaatgcacaccggatgagaaagaggcatggaaacga
ggcccttttcaaaatggctgcccggcgtgtagatatgaaaaatgtttggaagtcggcatg
tcaaaaaatgcaattaagatagggcgatacacattgaaccataagacaagaaacatcaag
aagattaagtctattgagacgattgacaatctcataacagctttaacagaaactgtctcc
gattcaagtcctgtgtcagcttccggtttagatgaggaagtttctagatccccgtcagca
tcacctgtagatatatcggaactttctattggctcatcatccacttcacttgacagcttc
cagtcaatcaacgcactcatcacatctccgaaagaaacgagaaaccctggaattagcttg
aaggagatagattgtatagtgaagaccttgacagaagcccacaccactttgatagttgat
gatagagcgaatatacctaccgaaactatcaagaagaagcaagatgaatatttggagaaa
tatagactgaaaatggaacttttcgggagtatgagaaatatcacgcacgatgaattcaag
gagttttacaatgcaacaggaatcgatatagacggccgtcttgagagagccgataccgca
tttaaatattttgaagataagatagcaatggttgtcgcatttgctaaggcaattccagga
ttcaaagaattaggtctagatgaccaagcgaacttgataaaagcttcccgtgtagaaact
agtttaatttgtgcgtacaagaacacgatgagaaaccttgacatggagaaaagggtggtg
acactgccatggggagcgtccttgcatttagacgagctcggaaaattcttaccgatggaa
catcttaatgcacgattccagtttgcaaaacagttggcagatcttaacttgtccgtccaa
gaagaatgcattattcgagccattcttactctctttactgatcgttgcaaattggaagag
cctgaaaaggtggacacactccaggagaaaatggtcatgtgtctccaacatttgataaac
atccggcccggtggctctgggacactgctgtataagatattcaatatcatcacaaactta
cgtgaactcacggacaaggaaatggaatatgccaaaaacttacttgttgagtggccaatg
ttaaatctgaatagttaccaccttgtgagggaatttctgggctga
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