Mercenaria mercenaria (northern quahog): 123541409
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Entry
123541409 CDS
T07835
Name
(RefSeq) ATP-dependent RNA helicase DDX54-like
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmer03009
]
123541409
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123541409
Ribosome biogenesis [BR:
mmer03009
]
Eukaryotic type
Pre-60S particles
Helicases
123541409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
123541409
NCBI-ProteinID:
XP_053381877
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All DBs
Position
16:complement(41203792..41246126)
Genome browser
AA seq
689 aa
AA seq
DB search
MRLPLLKLGKYTGLRAAVVLGGDRMEDQFAALHSNPDIIVATPGRFMHVAVEMDLKLKSV
QYVVFDEADRLFEMGFQEQLNEILNRLPESRQTVLFSATLPKLLVDFAKAGLHDPTLIRL
DVDTKLSDQLKLSFLQCRADDKLGVLLHVLRHVIPSGEQTVVFAATKHHVEYLNLVLQKA
EISCTYIYSSLDPTARKINLAKFQHRKVMVMIVTDLAARGIDIPLLDNVINYNFPAKAKL
FVHRVGRVARAGRSGVAYSLIAPDEVSYVVDLHVFLGRPVKFVPLGKQVKDKDGLYGTVP
QTIIDDLAETIFAWHEESYDIKAMVKVCSNAYGHYIRSRPAPAPESVKRVKEMEKLGQHI
GTHPMFGLEEDTSEAERLKLLNALKSYKSNTTIFEVNSTAKNSSFSVMKKKRNYHDKVVE
SKQRKVEENRLEPGTEVEDRSSGQDTADEAALAETFTVVIGGKQSTASQDSQSGSSLQIG
KKRKKKGKEPVRDEENYISYRPSDYQTEQGLRLGSSFDREASGAVLDLAGDDESINKKRT
NALKWDRKKKKYVRESNEDPKKKKIRTESGALIPASYKSNAYKEWVKKSKTDIQVEKDEE
EDDDAPQKQNRTKNKLAVLGVTEYNRRHVKGSDVGYQGNKRDKFKRKGSELKRPEQIAKA
RKLKAKKEAFQSQRQHKHKVNKAKHKSKK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttccgttgctaaagttagggaagtatacaggtctacgtgccgctgtggtgctg
ggtggtgacagaatggaagaccagtttgctgccctacattctaaccctgacataatcgta
gctactccaggtagatttatgcatgttgcggtagaaatggacctgaagctgaagtcagtg
cagtatgttgtgtttgatgaagcagacagattatttgagatgggattccaagagcagttg
aacgagatcttaaatcgtctaccagagtccagacagacagtgttgttctcggcaactcta
cctaaattgctggttgactttgcaaaagccgggctccatgacccaacattgatcagatta
gatgtagacacaaaacttagtgaccagttaaagctctccttcttgcagtgtcgagcagat
gacaagcttggtgtactgttacacgttctgagacatgtcataccatcaggagaacagacg
gttgtgttcgcagcaaccaaacaccatgtggaatatctaaatctagtactccagaaagcc
gaaatttcctgtacatatatctacagttcattagaccctactgcccgcaaaattaacttg
gcaaagttccaacatcgtaaagtgatggtgatgatagtgacagatttggctgcgagagga
attgatataccgctcttagataacgttataaattacaatttcccagcaaaagccaaactt
tttgtgcacagagtaggtcgagttgcacgtgctggtcgtagtggtgttgcatattctttg
attgcccctgatgaagtgtcatatgtggtagatctacatgtattcctgggaaggccagta
aaatttgtacctctaggaaaacaggtgaaagataaggatggtctatatggcacagtacct
cagactataatagacgacctggccgagacaatatttgcttggcatgaagagtcctatgat
attaaagccatggttaaagtttgcagcaatgcatatggacattatattcggtcaagacca
gcgcccgcaccagaatctgtgaagcgggtcaaagaaatggagaaactgggtcaacatatt
ggcacacatccaatgtttggtttagaggaagatacttcagaagcagagaggcttaagctg
ttgaatgccttaaagtcatacaaatctaatacaacaatttttgaagtcaactccactgca
aagaacagcagttttagtgtaatgaaaaagaagaggaattaccatgataaggttgtggag
agtaaacagagaaaagtggaggaaaacaggcttgaacctggcactgaggttgaagatcga
agcagcgggcaggacacagctgatgaggctgcactagcggaaactttcactgttgtgatt
ggtggaaaacagtccacagctagtcaagacagccaatcaggatcaagcttacagattggc
aagaagagaaagaagaaaggaaaagagcctgtcagagatgaggagaactatatatcgtac
agaccctctgactaccagacagaacaaggtttacgactgggaagcagctttgaccgagaa
gcatctggagctgtcttagatctggcaggtgatgacgaaagtataaataagaagagaaca
aatgctttaaaatgggatagaaagaaaaagaagtatgtaagagaaagtaatgaagaccca
aagaaaaagaagattaggacagaaagtggagcattgataccagcttcctacaaatctaat
gcatataaagaatgggtgaagaaaagtaagacggacatacaagtcgaaaaagatgaagaa
gaagatgatgatgcaccgcagaaacagaatagaacgaaaaataaacttgctgttcttggg
gtcacagagtataacagaaggcatgtgaaaggatcagatgttggttaccaaggtaacaag
agggacaaattcaaaagaaaaggctccgagttgaagagaccagagcagattgcaaaagcc
agaaagctgaaagctaagaaagaagctttccagtcacagagacaacacaaacacaaagtc
aacaaagccaaacataaatctaagaaataa
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