Mercenaria mercenaria (northern quahog): 123541629
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Entry
123541629 CDS
T07835
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04120
Ubiquitin mediated proteolysis
mmer04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123541629
04120 Ubiquitin mediated proteolysis
123541629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123541629
Enzymes [BR:
mmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123541629
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123541629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-HC5HC2H
FANCL_C
zf-RING-like
zf-RING_5
zf-ANAPC11
zf-HC5HC2H_2
PHD_NSD
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
123541629
NCBI-ProteinID:
XP_045183100
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All DBs
Position
1:36824776..36845312
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AA seq
648 aa
AA seq
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MQEMKSLMLTCGSFVLTATVVGNAFYQKQQFYPSVVYITKSNPSMAVLYLQAFVFVILMG
KLFRKIFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPKFVASFTLLLFLKCFHW
LAEDRVDFMERSPVISFLFHVRVISLLTFLSVIDAYFVNFAYHSTLTKGASVQLVFGFEY
AILMTIVMMAVMKYVLHSIDLQSENPWENKAVYLLYSELVLGFIKVILYMMFTIIMIKIH
TFPLFAIRPMYLSVRGFKKSLHDVIMSRRAIRQMNTLYPDVTTEELQSGDNVCIICREDM
VMACKKLPCNHIFHTSCLRSWFQRQQTCPTCRMEVLRMHPTRPTPPPQQPPYPQQQPPQP
PFQNMFGAGFPQMAPMWPPQIPQQQAQQAQGTTAPQTPTAPAASAPSSPPPQTPPSGIPP
MPGAMPGTMPGTLPGAMPWAMPGAVPGAMPGSMPGAMPNMPSFMPMFPMFMPNNFPRPPS
NLSGLSVEELRSMEGTERENIEARIQWLRDIQALLDGAMLLMQQYNTVAANSSTSGINLS
QPTQTGTQPPVFTSPGEETGARPKYSTPRKHTQNIDNIQSEQNTDATEGAGAMGFTPEIE
EEIPKWEDPRKEEHTDEMDEVRRRRLEKFLDSKNSENNLTQAEEKSES
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaatgaagtcgttaatgttaacgtgtggcagttttgtgttaactgcaacagtt
gttggaaatgctttttatcagaagcaacagttctacccttcagttgtgtacataacaaag
tcaaatcccagtatggcggttctgtacttacaagcatttgttttcgtaatattgatggga
aaactgttccgtaaaattttctttggacagcttagagcagcggagatggagcacctgata
gagaggtcatggtatgcagtgacagagacttgcctagcatttacagtgtttcgtgatgac
tttagtccgaaatttgtagcttccttcacactcctgttgttcctgaaatgttttcattgg
ttggcagaagacagggtggacttcatggaaagaagtcctgtcatttccttcttgtttcat
gtaagagttatcagtctgttgacatttctgtcagtgattgacgcctattttgtcaacttt
gcgtaccacagtaccctcacaaaaggagcatctgtacagttagtgtttggttttgagtat
gctatattgatgacaattgtgatgatggctgtaatgaagtatgtactccattccatagat
ctacagagtgaaaatccctgggaaaacaaggcagtttatctcctctactcagaacttgtt
cttgggtttataaaggtgatattgtacatgatgttcactattatcatgatcaagatccac
acattcccattgtttgccatcagacccatgtatctctctgtcaggggcttcaagaaatcc
ttgcatgatgtgatcatgtctagaagggctatcagacagatgaacacattatacccagat
gtgactacagaagagctgcagtctggtgacaatgtgtgtatcatttgtcgtgaagacatg
gttatggcctgtaagaagttgccgtgtaaccacattttccacacaagttgtctacggtcc
tggttccaacgtcagcagacatgtcctacatgtagaatggaggtgttacgaatgcaccca
acacgcccaacacccccaccccagcagccaccctacccacagcagcaacctccacagcca
ccatttcagaatatgtttggtgcaggatttccccagatggccccaatgtggcccccacag
atccctcaacaacaggcacagcaggcacaaggtactaccgccccacaaacacctacagca
ccagcagcctctgcaccatcatccccaccaccacaaacgccaccatcaggtataccaccc
atgccaggggcaatgccgggaaccatgccaggcacattgcctggagcaatgccctgggcc
atgccgggggcagtgcccggagccatgccagggtcaatgcctggagccatgccaaacatg
ccatcattcatgccaatgtttcctatgtttatgccaaataatttccctcgtccgccctcg
aatctgtccggattgtctgtggaggagttgagatctatggagggtacagagagggagaat
attgaagcccggatacagtggttacgtgatattcaagctttactagacggtgcaatgtta
cttatgcagcaatataacacagtggcagctaattctagtacatcaggaataaatttatca
cagccaacacagactggcactcagccacctgtgtttacatcacctggtgaagagactggt
gccagacctaaatatagtacacctagaaaacatacacaaaatatagataatatacagtct
gaacaaaatacagatgcaacagaaggagctggtgctatgggatttactccagaaatcgag
gaagaaatacctaaatgggaggatcctcgaaaagaagaacatacagatgaaatggacgaa
gttcgtagacgtagattagaaaaattcttagactcaaaaaattccgaaaataatttgact
caagcagaggaaaagagtgaatcatag
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