Mercenaria mercenaria (northern quahog): 123541809
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Entry
123541809 CDS
T07835
Name
(RefSeq) mRNA export factor-like
KO
K14298
mRNA export factor
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123541809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123541809
03036 Chromosome and associated proteins [BR:
mmer03036
]
123541809
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123541809
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123541809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
123541809
NCBI-ProteinID:
XP_053399956
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All DBs
Position
5:74385499..74412635
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AA seq
374 aa
AA seq
DB search
MSFFGSTSSTFGNTSSGAGMFGTTTNTNYNAMKDIEVTSPPDDSVSCLKFSPESMMQSTY
LVAGSWDNNVRCWEVQQSGTIVLKAQQTHTGPVLDADWSDDGTKVFTASCDKTAKMWDLN
SNQFVQIAQHDAPVKTVHYVKAPNYTCVMTGSWDKTLKFWDTRQPTPIMNIALPERCYCA
DVKYPMAVVGTAGRGLIIYQLENQPQEFRKFESPLKYQHRCVSIFMDKKTNQPTGFALGS
IEGRVAIHYVNPTNPKDNFTFKCHRANGTTSNNMQDIYAVNDISFHPVHGTLATTGSDGR
FSFWDKDARIKLKTSEQFDQPLTACNFNPQGNIFAYATSYDWSKGHEGFDPQKMKPHIFL
RRCFDELKPSTKKS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctttggttcaacatcgtcaacgtttggaaacacgagcagtggagcaggaatg
tttgggacaaccactaacacaaattataatgctatgaaggatattgaggttacctctcca
ccagacgacagtgtgagctgcctaaagttcagcccagagtctatgatgcaatcgacctac
ttggtagccggtagttgggataacaacgtacgttgttgggaggtgcagcaatcggggacc
attgtcctgaaggcccaacagacccacactgggccagtacttgatgctgattggagcgac
gacggtactaaagtgttcactgcatcctgcgataaaacggccaaaatgtgggacttgaac
agtaatcagtttgtacaaatagctcagcatgatgctccagttaaaactgtgcattatgtg
aaagctccaaactatacatgcgttatgaccggaagctgggataaaactctcaagttttgg
gatacaagacaaccaacccctatcatgaacatagcgctgccggaaagatgttactgcgct
gatgtgaaatacccaatggcggttgtcggcacagcaggcagaggtctgatcatataccaa
ctggagaaccagccgcaggagttcagaaagtttgaatctccgctgaagtaccagcatcgc
tgcgttagtatctttatggacaagaagacaaaccagccaacaggattcgcacttggcagt
attgaaggacgagttgcaatacattatgtaaatccaacaaatccgaaagacaatttcact
tttaaatgccacagagcaaatggtaccacttccaacaacatgcaagatatatatgctgtg
aatgacatctcttttcaccctgtacatggtaccctggctactacgggctctgacggaagg
tttagcttttgggacaaggatgccagaattaaactgaagacctctgagcaatttgaccaa
ccactcactgcttgcaactttaacccgcaaggcaacatctttgcatatgcaaccagttac
gattggtctaaaggccacgagggtttcgacccacagaagatgaagccacatattttcttg
aggaggtgctttgatgaacttaaaccttctaccaaaaaatcataa
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