Mercenaria mercenaria (northern quahog): 123541920
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Entry
123541920 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123541920
KO
K09175
DNA-binding protein RFX7
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123541920
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Other basic domains
RF-X
123541920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
PDEase_I_N
Motif
Other DBs
NCBI-GeneID:
123541920
NCBI-ProteinID:
XP_053386900
LinkDB
All DBs
Position
19:22173719..22217749
Genome browser
AA seq
2067 aa
AA seq
DB search
MYGTLHSHSQQIIVPSRDSSGFTSARDEGSKRYGKIQDGLESSISVEGRARITRVLGEIH
SLTDVEKLLLYLKLPTGVVQEDQSRLTPPSCLPTSNRKEQGEAFTWIKSHLEEHGDVCMP
KAEVYDEYRQYCEHHDLRPLCNADFGKMMKQVFPDINTRRLGQRGQSKYFYGGLRKKIEH
APPTLPELEITTKTIEIDSNTIDSEMFKSSCQLVCEWADKLLDMKFSGIQEIAEHLIVKA
FVNTKSVAAFTLIAAMQESGKYNLKDSALFSSQPNSGGDKHKETNILLQRKLQQNKEIQK
QKVKAQALREEIQQQIVSHGNNSSNMPGSKTPVSSQRKSATPLSTSGSAVQLKSPRNPGP
LSSPAPSPQKFQSPRKSVSPWQQQKTIESHGKGSVTVSQSNVENEVSVCVTVHDVANVRN
AKSAYTMKSHDGWKNDQQQNVEKPLARSQLSKERESVSLVNEKEEECDEDFDGYKPMSTE
SICEAKTPENCMETDQSELTHVRKIDFDDLVAQHSGDNKSQYNINTVSEKVNNDNTKSSV
STDVTESSADKLSKSTGYLSLKKMLENKSEDPSGLNKSLGHLGKSKTALFVNQSTVPGRS
AFVPFSQVQSLCRKEGSGINQSVAMAIPIIIPSAAQTQTSQTVSQSASITMIALPTDMQT
SPTKNPSEMINNESLFNIVPASAIFKQASSTGSTELTFKTSTIDSSRSTINILNQARDGT
NVTVSSVMSKTTGSECIVSVAQGMQNLPKQLRTKFTPIRPKASPNKAQPQKETKADIPTY
DKDKRPVSAILKEKRAKEQAEAIAKFQSSIRLPYQQNISLSGQTLSTLQGIKAGSSNIPA
SEVVIIVNNQQVKLQQVVGQQCVADNPSLTSKMSISDKDHRNSTADSMGMNQIDKAKTSS
GMNTAPSENLMNQSQNSNMTYISFSDSKNGKEDNEFGLADKGSTEVKEFSPMSEDRDITP
ILCEEDDSNDLSENLTRSAADLNKTDRNNQSKVSEMDANKNVNITTDIVDQMWLETPRKI
QKLNITSPFQEDSMVLLGRETPVRISQPPDLSLNRPESAGSYGRETPSGARKRKSSDFHA
RQNFKRLNSTGEENEDSHNVSFVLSPDSEPSVSMNPRRTQSCTVELDSETKVKYHPQQIH
QQQVQQQQQPLKAGGGSLLPGLQSPDIHSLEREALIESFPNSLYAMKPQHKSHKNQSSSV
GVSAKTLRQSQQKLIKQQQYLDERVKNFLLTQAEPSFAVEIESNESVTKTTDEQKTGQIS
PGSKASLKAESFVVTDRGKPYQRPSSVATVSSRSSNQEIEPSGLPSEVADWINETIEKRQ
KENQSVMSEPEFRNYQSMKADRNPKLLNFKFEVDNSIQSGNKTSVTSRSQSKNAKEISNS
KTLRDLSNDDSNFTVPKAPPVSNTRLKDTLRLNTEISSVSQRCQSLPIFASPVQSPVSPM
APPVGHIHSNQRASSMSPRAQVTDQSAEMLSPTSFGILSPVRRREMRDAGHRESKQGTYL
ASIQHSLQKPVDTPHDVISPQDTSFGKHPLAGGKSILQNRSRESSIDADDRFVSKTPFSD
SGYHSSGPSPILNSTPVSVADHSDLVYGQGRGHMTYKPSIAESPITMVTDYTSPVQQLSP
QQSPNRPQLTVHQQNVSIATSQMNNLGMNPNQLRSSIHSAFIPIQGSHHDVRYVTPIKPV
VTLPNNSVEQSPGSKDSTGALFVDANQPIAGADITMISPRSADPPSYEVAIKHLKKSSPP
KDGTINQSHSSEMLNKIDPIQEQIPQLDQQQSLLANMGNEQTSDSLGPFAQKLMKLSQQT
QGGGKGLRTLFRSEILSSANQVSLVTNAGSEMIPVETDLSNVSATVNNCQSNISTSDIDH
NGATVDFNFSGDVNMYANNQLMKKNLFDQRQTNCVLKQNRVHKSVLSNTYPEHSMLISNP
VSDTVLNIDPSFHASSHFGTANQEKALSSLHNHQSANLNLNESSQLLNKPDFSLPTSDFN
ETQRFQVTSTEMGLFNNNGAFNRGENTSTLKNLLIEGKLANEELEMVVENGQNKSEEISQ
QELIDDIGLPWESLREIEGDFGDFNMF
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaccttgcatagccattctcagcaaattattgtaccatctagagactccagc
ggctttacatcagcacgtgatgaaggcagtaaaagatacggaaaaattcaagatgggtta
gagtcgtctattagtgttgagggcagagctaggataacaagggtattgggtgagattcac
agtttgacagatgtggagaagttgttgctataccttaagttaccaacaggggttgtccag
gaagaccaaagtagactaacaccaccatcatgcctgccaacgtcaaacaggaaagagcag
ggagaggctttcacttggataaagagccaccttgaagaacatggagatgtttgtatgcct
aaagcagaggtgtatgatgaatacaggcaatattgtgaacatcatgacttacgtccatta
tgtaatgcagactttggaaagatgatgaaacaagtgttcccagacattaacaccaggaga
cttggacaaagggggcaatccaagtatttctatggaggattgagaaagaagatagagcat
gctccacccaccttgccagagttagagattactacaaaaactattgagattgattctaac
accattgacagtgagatgtttaagtcatcttgtcagcttgtttgtgaatgggcggacaaa
cttcttgatatgaaattctcgggtatccaggaaattgctgaacatctgattgtgaaagca
tttgtcaataccaagtctgtggcagcatttactctgatagcagcaatgcaagagagtgga
aaatataaccttaaagattcagcattattcagcagtcagccaaactctggtggagacaaa
cacaaggaaacgaatatactgttacagagaaagttacaacaaaacaaggaaatacaaaag
cagaaagtaaaggctcaggcattaagagaagagattcagcaacagatagttagtcatggt
aacaacagcagtaacatgcctggatctaaaactccagtatccagtcagagaaaatctgct
actccattgtctacatcaggatctgcagtacaactcaagtctcccagaaatccaggccca
ctctctagtcctgcaccatctccacagaaatttcagtcaccaagaaaatctgtgtcacca
tggcaacaacaaaagacaattgaaagtcatggcaagggttctgttactgtttctcagtca
aatgtagaaaatgaagttagtgtgtgtgtaacagtgcatgatgttgctaatgtaagaaat
gccaagagtgcttatacgatgaaatcccatgatggttggaaaaacgatcaacagcaaaat
gtagagaagcctttggcaagaagtcagttatcaaaggaaagagagagtgtgagtttagta
aatgaaaaggaagaagaatgtgatgaggactttgatggatataaaccaatgagcacagag
agtatttgtgaagctaagacaccggagaattgcatggaaacagatcagtctgaattgact
catgtacgaaaaattgactttgatgatttagttgcacaacatagtggtgacaacaagtcc
cagtataacataaacacagtgtcagaaaaagtgaacaatgacaatacaaaaagcagtgtt
tcaacagatgtgactgaatcttctgctgataaactgtcaaaatcaactggatatctcagt
ctaaagaaaatgttagagaataaatcagaagatccgtctggtttgaacaagtccttggga
catttaggaaaatccaaaactgctttgtttgtaaaccagtcaaccgtccctgggagaagt
gcttttgttcccttttcacaggttcagtccttgtgcaggaaagaaggttccggcattaat
cagtcagttgctatggcaatacctataataattccttctgcagcacagactcagacaagt
cagactgtgtcacagtctgcaagcattacaatgattgcattgccaacagatatgcaaacc
agtccaacaaagaatccatcagaaatgataaacaatgagtcattgtttaatatcgtacct
gcatctgccatatttaagcaagcgagtagtacaggaagtacagagttaacatttaaaaca
tcgaccattgattcctctaggtctactataaacattctaaatcaggcaagagatggtaca
aatgtgactgtatcatctgtaatgtccaaaacaacaggaagtgaatgtatcgtatctgtt
gcccaaggtatgcagaatcttcctaaacagttgcgcacaaagtttaccccaattcgccca
aaagcatctccaaataaagcacaaccacagaaagaaacaaaagcagacattcctacctat
gataaagataagcgaccagtttctgcaattttaaaagaaaagcgagcaaaagagcaagca
gaagctatagcgaaatttcaatccagcatacgattaccatatcaacaaaacatatcacta
agtggacagacgttgagcactctccaaggaataaaggcagggtcaagtaacataccagct
agtgaagttgtgatcattgtgaataatcagcaagttaagctccagcaagttgttggtcaa
caatgtgtagctgataatccgtctcttacaagtaaaatgagtatatctgataaggatcat
agaaattcaacagctgacagtatgggaatgaatcaaattgataaagctaaaacttcctca
ggaatgaacactgctccttctgaaaacttaatgaatcagtctcagaattctaatatgact
tacatatcatttagtgactcaaaaaatggtaaagaagataatgaatttggacttgcagat
aaaggttctactgaagttaaagaattctctccaatgagtgaagacagggacataactcct
attctttgtgaggaagatgatagtaatgatttgagtgaaaatttgaccagatctgcagca
gacttaaataagactgatagaaataatcaaagtaaggttagtgaaatggatgcaaataag
aatgtgaatattacaactgatatagttgatcaaatgtggcttgaaacaccaagaaaaata
caaaaattgaacataacgtcaccttttcaagaggacagtatggtgttattaggtcgagaa
acacctgttagaatttcacaaccaccagatctcagtctaaacagaccagaaagtgctggt
tcttatggaagggaaactccatcaggagcaaggaaaaggaagtcatctgattttcatgca
agacagaatttcaagcgtttgaattcgactggagaggagaatgaagactctcataatgta
tcatttgtccttagtccagacagtgagccatctgtcagtatgaatcctagaagaacacag
tcttgtactgttgaacttgactccgagactaaggtcaagtatcatcctcaacagatccat
caacaacaggttcagcaacagcagcagccattgaaggcaggaggcggatctcttttacca
gggttacagagtccagatatacacagtctagagcgagaagctttgattgaatcattccct
aacagtttgtatgccatgaaaccacaacacaagtcgcacaagaaccagtccagttctgtt
ggggtaagtgcaaagacactgagacagtcccagcaaaagttgattaagcaacagcagtat
cttgatgaaagagtgaaaaactttctcctgacacaagcagagccaagctttgcagttgaa
attgaaagtaatgaatcagtcacaaaaactacagatgagcaaaagactggtcagatttca
ccaggaagcaaagccagtctgaaagcagaatcatttgtagtaacagacagaggaaaaccc
taccagaggccatccagtgtagctacagttagcagcagaagttcaaaccaggagattgag
ccgtcaggtttgcctagtgaagttgcagactggatcaatgaaactatagaaaagagacag
aaagaaaaccagtctgtaatgtctgaaccagaatttagaaattaccagtcaatgaaagca
gatagaaatccaaaattgctgaactttaaatttgaagttgacaattccattcaaagcgga
aataaaaccagtgttacttctcgaagtcaaagtaaaaatgcaaaagaaatttcaaattct
aagactttacgtgatctttcaaatgacgacagtaacttcactgtccctaaggcacctcct
gtctcaaacactcgcttaaaagataccttgcgacttaacacagagatatcatctgttagt
cagagatgtcagtctttgccaatttttgcctcaccagtgcagagccccgtatcaccaatg
gcaccaccagtaggtcatatccatagcaaccaaagagcttcatctatgtcaccaagagcg
caggttacagatcagagtgcagagatgctctcaccaacttcatttggaatactctcccct
gtaagaagaagggaaatgcgagatgcaggtcacagagagtctaaacaaggtacatatctt
gctagtatccagcattcactgcagaagcctgttgatacaccacatgatgttatcagtcca
caagatacttccttcggtaaacatccacttgctggaggcaaaagtattctgcagaatagg
agcagggaatcatccatcgatgcagatgaccgttttgtctcaaaaacaccattttccgac
tctggttatcatagcagtggtcctagtcctatattgaattcaacaccagtgtcagttgca
gatcactctgaccttgtgtatggtcaaggaagaggtcatatgacatataagccatctatt
gctgagtcaccaatcactatggttacagactatactagtccagttcaacagctgtctcct
caacagtctccaaacaggccacaattgactgtacatcaacagaatgtttccatagcaaca
agtcagatgaataaccttggcatgaatccaaatcagcttaggtcttcaattcatagtgca
tttattccaattcaaggatctcatcatgatgttcgatatgttaccccaataaaaccagtg
gtaactctaccaaataatagtgtggaacagagtccaggaagtaaagacagtactggtgct
ctgtttgtagatgctaatcaaccaattgctggtgcagatatcactatgatctctccaaga
tcagctgatccaccatcttatgaagtagctattaaacacttgaagaaatcctctcctcca
aaggatggaacaataaaccaaagtcattcgtccgaaatgttgaacaaaattgatccaatt
caagaacaaattcctcaacttgaccagcagcagtcgttgttggcaaacatgggaaatgaa
caaacatccgacagtttgggaccttttgcacaaaaacttatgaaactgtctcagcagaca
cagggtggtggtaaaggtttaagaacattgttcagaagtgaaattttaagttcagctaat
caagtttccctggtaacaaatgcaggaagtgagatgattcctgttgaaactgatctcagt
aatgtgtccgctactgttaataattgccagtcaaatatctccacttcagacattgatcac
aatggtgctacagtagattttaatttcagcggagatgtgaacatgtatgcaaataatcag
ttaatgaaaaagaacttgtttgatcagagacaaacaaactgtgtgctgaaacaaaatcgt
gttcataaaagtgtgctttcaaacacctatcctgaacattccatgctcatttcaaatcct
gtatcagacactgtgctaaatatagatccgtcctttcatgcatcatcccattttggaaca
gccaatcaggaaaaggctttgtcatctttacataatcatcagtcagcaaatttaaattta
aatgaaagcagccagcttttgaacaaaccagacttttccctccccacaagtgattttaat
gaaactcaaagatttcaagtgactagtacagaaatggggctgtttaataacaatggtgct
tttaacagaggtgaaaatacaagtactttaaaaaacctgttaattgaagggaaattagcg
aatgaagaacttgaaatggttgttgaaaatggacaaaacaaatcagaggaaatttcacag
caagaactgatagatgacatagggttaccttgggaatcgttaagggagattgagggagac
ttcggagattttaacatgttttaa
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integrated database retrieval system
