Mercenaria mercenaria (northern quahog): 123542054
Help
Entry
123542054 CDS
T07835
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04137
Mitophagy - animal
mmer04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123542054
04137 Mitophagy - animal
123542054
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmer01002
]
123542054
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123542054
04121 Ubiquitin system [BR:
mmer04121
]
123542054
Enzymes [BR:
mmer01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123542054
Peptidases and inhibitors [BR:
mmer01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123542054
Membrane trafficking [BR:
mmer04131
]
Endosome - Lysosome transport
Others
Others
123542054
Ubiquitin system [BR:
mmer04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123542054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
UCH_1
WW
Rhodanese
Motif
Other DBs
NCBI-GeneID:
123542054
NCBI-ProteinID:
XP_053387107
LinkDB
All DBs
Position
19:complement(45209026..45281828)
Genome browser
AA seq
1214 aa
AA seq
DB search
MPGSTKKDLYIAKSIGQLNEMAELPAKFKTTHAKLLVKTADKMLKEAQHSEMIEDEERAY
VLFMKYFNVVTFLKKTADYKKQKAYYDDLLGTKNLLTSIDKAEVLSGSLKERYDQLEAEH
VASKLSSLDTVEKKVEDKVEVDAKHSDKQPQIKTDDKEPKPEEPVKKTSPGVISCSTLFD
LFEDRDAQVIIMDVRPMEEFQETRINHKNIINVPAEAIKPGTTVTYIEKALPMDSLSLWK
QRGNIDHIILLDWNSSIDKVKIGTSLQTLKDALYKYDSTVIIKSEPLILDGGYEQWMLQY
PTKCVNPVFDKLKKPVVSSTQDSLMDFDYPDFDETFMEPKPAKTSSIESSNSSSSLSSAS
SVMNGDISGNLPRIDRSTKPKIDRSTKSNVTTTQVNANKSFSSSLYPDVRAVSKPGNSLY
SETNEAGSKSIDSSFRNTDSRAESVTAGGSRATSQDIKNSSTLAAQSTEISDELKALEQQ
KKQKMEEIRKLQENYEKIEAESRARMEQMASEEKKLSDLEELKRKQQTDVADLMRMKKNL
HSNMAEEKQHVQQQQQQKEQEESNRREELEQLTRAEEEKRRRQEEVNRLRMDRKKKEEDR
LQNERKMREEKELQDARERARQEEEQRKKDVTAAEERARQVKAEEDRKAAEKSQIEERLQ
MERELAAKMEKERLAALEEKRKQQAELDRLEAERREKLRLEKERAEKERLDREKRERDEE
DRKRAEEAKRVADEKLRLMNEAKSKAKLIPSPNLQKGWEKQLDPSTNRYFYINHHDGTTQ
WEPPNLPGEGKGGTYVTRLKDEPSTLKSGLKRSNSSPNIAKMMEDESKLPQRKAPPSVDR
GNKPVKRQMPVALPAKRRDLNPVYGNVGCALTGLRNLGNTCYMNSTIQCLNNTSPLVTYL
LTDLYLYDINRGEKAGNLWEVTDDFAYLVKSLWSGQYRFITPRDFKSVVGRQQPMFAGYE
QQDSQEFLTFLLDSLHEGLNKVKTRPKIAEQDNDKLPDHIGAELAWKNHKLHNESIIVEL
FQGQLKSTIMCLTCRKRSVTFQAFMFLSLPIPSSNRCTLQDCLRQFAAEEKMTGSSRWKC
PQCKCYRDSVKNIVIWKLPHILLIALNRFVYEGQWRTKINAHVDFPVRGLDMTTFVKGPQ
PKPYKLYAVSNHFGTLDGGHYTACCRNPNTQKWYKFDDHEVYDTSESSVKTSAAYVLYYT
SIDLLPPDFKPSFT
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtctacaaagaaagatttgtacattgcaaaaagcatagggcagctgaatgag
atggcagagcttccggccaagtttaaaactacccatgcaaaacttttagtaaagacagca
gataagatgttgaaggaggctcagcacagtgaaatgatagaagatgaggaacgagcctac
gtcttgttcatgaaatatttcaatgtcgtcacttttctaaagaaaaccgcagattacaag
aagcagaaagcatactatgatgacttgcttggaaccaaaaatcttctcacctccatagac
aaggctgaagtgctgtcaggcagtctaaaagagagatatgaccagttagaggcagagcat
gtagctagtaaactatcctccctggatacagtggaaaagaaggtggaagataaggttgaa
gtagatgctaaacatagtgataaacaacctcagatcaaaacagatgataaagagcccaag
cctgaagaaccagtcaagaagaccagtccaggtgttatttcatgcagtacattgtttgac
ctgtttgaagacagagatgctcaagttattatcatggatgtaaggccaatggaggagttt
caagaaactagaataaaccacaaaaatatcatcaacgtccctgctgaggctataaagcca
ggaacaactgtaacatacatagagaaagcattaccaatggactccttgtcgctatggaaa
cagcgaggtaacattgatcatattatccttctagactggaactcgagcatagacaaggtg
aaaataggcaccagtctacagactctgaaggatgcgttatataagtatgactccacagtg
ataatcaaaagcgagccactgattctggacggtggctacgagcagtggatgcttcagtac
ccaacaaaatgtgtgaaccctgtgtttgataaactgaaaaaacctgtggttagttcaacc
caggattctctcatggatttcgattaccctgattttgatgaaacttttatggaacctaaa
ccagccaagaccagctcaatagaatcatctaactcatcatcttcattgagcagtgcaagt
tcagtgatgaatggtgatatttctggcaatttgccaagaattgatagatctactaaacct
aaaatagacaggtctacaaaatcaaatgtaacaactacacaagtgaatgctaacaagtca
ttttctagttcattgtatccagatgtcagggctgtgagtaagccaggaaacagtttatat
agtgaaacaaatgaggctggttccaaaagtattgactcaagttttagaaatacagattcc
agggctgaatcagtcacagctggtggttctagggccacttcccaggatatcaaaaacagt
tcaactttagcagcgcagtctactgagatttcagatgaattgaaagctctggaacaacag
aaaaaacagaaaatggaggagataagaaagcttcaggagaattatgaaaagattgaagcg
gaatcacgagctagaatggaacagatggcttcggaagagaagaaactgtcggatcttgaa
gaattgaagagaaaacagcagacagatgtcgctgacttaatgaggatgaagaagaatctg
catagtaacatggcagaggaaaaacagcatgttcaacaacaacaacaacagaaagaacag
gaagaaagtaacaggagagaagagctagagcagttgacaagagctgaagaagaaaagaga
agacgacaagaggaagtgaaccgattgaggatggatagaaagaagaaggaagaagacaga
ttacaaaatgaaagaaaaatgagagaagaaaaagaattacaggatgccagggagagagca
agacaggaagaggaacaacgtaagaaagatgtcaccgcagcagaggaacgagcccgtcaa
gtgaaggcagaagaggacagaaaggcagcagaaaaatcccaaattgaagaacgacttcag
atggaaagagaacttgcagctaaaatggaaaaagaaaggctggcagcactggaagaaaaa
cgtaaacagcaggctgaactagatagacttgaagcggaaaggagagaaaaactgagactg
gagaaagaaagagcagaaaaggaaagactggatagagagaagagagaaagggacgaagaa
gatagaaagagagctgaggaagcaaagagagttgctgatgaaaagctgcggttgatgaac
gaggccaaatccaaagccaagcttataccgtcaccaaatcttcagaaaggttgggaaaaa
cagctggatccaagcactaacagatatttctatataaaccatcatgatgggacaacacaa
tgggagccacctaatctaccaggtgaaggtaagggagggacatatgtaacaagactaaaa
gacgagccttccacactgaagtcaggccttaaaaggtcaaattcttcaccaaacattgca
aagatgatggaagatgaatcaaaacttccacagagaaaagcgccaccttctgttgacagg
ggaaataagccagttaagagacagatgcctgttgctctgccagctaagagaagagatttg
aacccagtctatggaaatgtgggttgtgcgttgacaggtttacgtaaccttggtaacaca
tgctacatgaacagcactatccagtgtctgaacaatacatcacctctagtaacatacctt
ctcacagacttgtacctttacgatattaataggggagagaaggcaggcaacttatgggaa
gtaacagatgattttgcttacctagttaagtccctttggtcaggacagtacagatttata
actccaagggactttaagtctgttgttggaagacagcagcctatgtttgctgggtacgaa
caacaggacagtcaggaattcttaacatttcttctagacagtttacacgagggacttaac
aaggtgaagacgcgtccaaagattgctgagcaggataatgataagttaccggatcacatt
ggagccgaactagcgtggaagaatcacaaacttcataatgaatctataatagtggagctg
tttcagggccaactgaagtcgaccattatgtgcctaacatgtcggaagcggagtgttaca
ttccaggcgttcatgtttctttcgcttccaatcccgtcatccaacagatgtacactacag
gactgcttacggcagtttgcggcggaggaaaaaatgacaggaagttcgcggtggaaatgt
cctcagtgtaaatgttaccgtgactctgtcaagaacattgtcatttggaagttgccgcat
atattattgatagcattgaacagatttgtgtatgaaggacaatggagaactaaaataaat
gcccatgtagattttcctgtaagaggtctagacatgaccacttttgtgaagggcccacag
ccaaaaccatataaactatatgcagtgtctaatcattttgggacactggatggaggccat
tatacagcatgttgtagaaatcccaacacacagaaatggtacaaatttgatgaccatgaa
gtgtatgatacatccgaatctagtgttaagacgtcagcggcatatgtgctgtattacaca
tctatagatctactaccacctgacttcaaaccaagcttcacctga
DBGET
integrated database retrieval system
