Mercenaria mercenaria (northern quahog): 123542197
Help
Entry
123542197 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123542197
KO
K10283
F-box and leucine-rich repeat protein 17
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123542197
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123542197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
F-box-like
LRR_At5g56370
F-box
LRR_4
LRR_NXF1-5
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
123542197
NCBI-ProteinID:
XP_053387495
LinkDB
All DBs
Position
19:complement(43474885..43519546)
Genome browser
AA seq
984 aa
AA seq
DB search
MDQPANECPCKRQRVSEGDDIDQETGMLLDDSTENKEYEDTTEKDSTQREATVGQKSDSV
LGRDTTQVETFTGAAGDSESNSDLRKFSDLFCTPKHVGDEDQSVAYNESYFEKEKNQSTK
NVFTKQSARNDDNAHSFENQSSNTETGSQPSSENTAADVLNCMQDLHQSVGTAPRMQSNA
GFCEYAQNIQAIAESSYIRNRERNVSQNQIEKVPKLESPKLKRPFDRVNTNLAKKRMETF
SNSKPEVEEFNKTGSEINNRHTISSLESQLPILSSKEYRDQIEDKKKVESFASFGTLNGS
KTNEGKNMLENSNAESTRTFQETSDLEVLQSDTDSVKNAERENQNKTNSNIHSLAEGFDV
SGFVEMFSNSVMGNIMSGTVNTGSFRDSGRLGHMAVKEKDGGKGDMSRKDDKSSSRADDT
EGGHEINIGEVNDDPTGTCKFKGLGSLLDDIGHSAEREVKAAKVDTVVDPCRVASGSSNQ
ILTSTNDIDTRSVTLNRLHDTTNENTAFVGNSERRLNTSDMNCAEVHETGATLSSREVTV
ESFEGTEPLEAVDKELNDSGVEIGATAGNEQIAIDVKRKSTSTLINGRFRLDFKQTEEII
NQNNINSLPITVLVHIFKNLNVFELLRRASPVCKYWYNLCRDPDLWRSICLVNQHRLSDT
DLEKVLWFSDYRVRNINLTDCRFLTNKGVKFLVMRCPQIEVLRVMRCFDLTDVAFEGLYS
LGLCSNLRALYMDGCCRITDNTVLEVSEACPQLRTLHLNQCTRISDSSIIRIAQNCPHLT
NLQLDHCSQVTDEAMSEIVMGCPDMMYLNLMCCGITDKGVKCIAKLSKLTNLDLSNLPRL
TSDSVVYLSKFCKNLQCINVSLNTMMDDWCIAQLAKNLPMLKRLYCVSCSISDKGLEDIA
EYRPTLEALDVGWCQAVTDRGVRVISLACKHLDYFGLIRCDRVTIETIEELVLKYPRINY
STFILESRKLLERARKEGYQFKLP
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggaccagccagctaatgaatgcccatgtaaaagacagagggtttctgaaggggatgat
atagatcaagaaactggtatgcttcttgatgattctacagaaaataaagagtatgaagac
acaactgaaaaagatagcacacaaagggaagcaactgttggacaaaaaagtgattctgtt
ctaggaagggacacaactcaagttgagacattcactggagctgctggggattctgaaagc
aattctgatttaagaaagttctcagatttattttgcactcctaaacatgttggtgatgag
gaccagtctgttgcatataatgagtcctattttgaaaaagaaaaaaaccagtctacgaaa
aatgttttcacaaagcagtcagcaagaaatgatgacaatgcacactcatttgaaaaccag
tcttcaaatacagagactggttctcaaccaagtagtgaaaatactgcagctgatgttttg
aattgtatgcaggatttacaccagtctgttggaactgcacctagaatgcagtcaaatgct
gggttttgtgaatatgctcaaaatattcaagcaattgctgaaagttcgtatataagaaat
agagagagaaatgtatctcaaaaccaaatcgaaaaggttcccaaattggaaagtcctaaa
ttaaaaagaccgtttgatagagtaaataccaatttagcgaaaaaaaggatggaaactttt
tctaattctaagccggaggtggaggaatttaataaaactggttcagaaatcaataatagg
cacacaatttcttcacttgaaagtcagttacctattctgtcttctaaagaataccgggac
caaatagaagacaaaaagaaagtagaatcttttgcttcctttgggacgttaaatggcagt
aaaacaaatgaaggaaagaatatgctagagaatagcaatgcagaatcgacaaggactttt
caagagaccagtgacttagaggtgttgcaaagcgataccgattctgttaaaaatgctgaa
agagaaaatcagaataaaactaacagtaatatacattcactggcagaggggtttgatgtt
tcaggctttgttgaaatgttctcaaattcagttatgggaaatataatgagtggcactgta
aacacaggaagtttcagggattctgggagattaggtcacatggcagttaaagaaaaagat
ggcggaaaaggcgatatgtcaagaaaggatgataaaagtagttcaagggcagatgataca
gaaggaggtcatgaaataaatattggtgaggtaaatgatgatccaactgggacttgcaaa
tttaaaggacttggaagcttgttagatgatattggacacagtgctgaaagagaagtcaaa
gcagcaaaagttgacacagttgtagatccttgtagagtggcaagtggttctagtaatcaa
atattaacttcgacaaatgatatagacactaggtctgttaccttaaacaggttacatgat
actactaatgagaatacagcttttgtaggaaattctgaaaggagactgaacacttcagat
atgaattgtgctgaggtacatgaaactggtgctactttaagttctagagaagtgactgta
gaatcatttgaaggaacggaaccattagaagcagttgataaagaattaaatgattcaggt
gtagaaataggtgcaacagctggaaatgaacagatagctattgatgtaaagcgaaaatct
acctcaactttgatcaatggaagatttagattagactttaagcagactgaagaaattatt
aaccagaataatataaacagtttaccgataacggtgttagtgcatatttttaaaaatttg
aacgtgtttgaattattacgtcgagccagtcctgtttgtaagtactggtataatttatgc
agggatccagatttatggcgaagtatttgtcttgtgaatcaacatcgattatccgataca
gacttggaaaaggtgctatggttcagtgattatcgagttcggaatataaacctcaccgat
tgtcgtttccttacaaataaaggggttaagttcctggttatgagatgtccccagatagaa
gtactaagggtaatgaggtgctttgatttaacggatgtggcatttgaaggactgtacagt
ctgggtctctgcagtaacctacgggctctgtacatggatgggtgctgtagaattacagat
aatacggtattagaggtgtctgaagcctgtccacaattgaggaccttgcatttaaatcag
tgtacaaggatttctgacagcagtattataaggatagctcagaactgcccacatttgacc
aatcttcagctggaccattgtagccaggttacagatgaggctatgtccgaaatagttatg
ggctgcccagacatgatgtatctcaacttaatgtgctgtggaataactgataaaggagtg
aagtgcattgccaagttgtcgaaactgaccaatctagacctgtctaatttacctcgtttg
acctcagattctgttgtgtacctgtcaaagttctgtaaaaatctacagtgtataaatgtc
tcccttaacacaatgatggatgattggtgcattgctcagctggctaagaaccttccaatg
ttgaaaaggctttattgtgtgtcctgtagtatctcagataaaggacttgaggatattgct
gagtatcgtccaacactagaagctcttgatgttggctggtgccaagcagtaacagatcgt
ggtgtaagagtgatttcccttgcttgcaagcatttggactactttggtcttattcgttgt
gacagagttaccatagaaacaatagaagaattagtgctaaaataccctagaataaattat
tctacctttatccttgaatcaagaaagttgttagagagagctagaaaggaagggtaccag
tttaagcttccttga
DBGET
integrated database retrieval system
