Mercenaria mercenaria (northern quahog): 123542301
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Entry
123542301 CDS
T07835
Name
(RefSeq) toll-like receptor 4
KO
K05401
toll-like receptor 3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
123542301
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mmer04054
]
123542301
04090 CD molecules [BR:
mmer04090
]
123542301
Pattern recognition receptors [BR:
mmer04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
123542301
CD molecules [BR:
mmer04090
]
Proteins
123542301
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR_2
TIR
LRR_4
LRR_1
LRR_5
LRR_14
LRR_EndoS
LRR_R13L1-DRL21
LRR_9
Motif
Other DBs
NCBI-GeneID:
123542301
NCBI-ProteinID:
XP_045184023
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Position
19:complement(9635663..9638597)
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AA seq
865 aa
AA seq
DB search
MGYFWIFFIIIHVSAKGRYSCGPDGKCFCYSNGEMDCSRTMLPLSYICEHIGNITKQNIS
TLHVENNDIRVIGAKDLERCERLSSLFLSGNNISKTSNYSFSYFEILEVLDISHNNLRVY
VEDGEQIPVFPTSLTTLKLNGNFEPNMTENEAYPNLQYLNQLTELYIDGLKNTFFPKSYR
SIKTLKQLELSGLNGYCNLPLVTNRTFENLIYLRELNLSSCNITRIHAGAFQKLSMLQIL
DLSKNMQLGFRCMRNVSFSLQFTDIQNLNYSQVYTTFGIGTQVQKRDFCFLWNTTLRELS
VNSNRLRLFETNALLLLPKTLNIVHMEDNKFTFTPYLLQLGCMSNLTKLYTNRQNSAHKP
SLYFQQPENIVPKFDPDVEDCPFMKEDFLRNISESIAGCTYFEPNKPIDFKKNFPKVPKQ
LKEVHMSDSTLHYNVTTIFIDPPNNNLEYIDLSGNILYSWTKPVGPFPKLKYLDLSRNYG
IQVTPTATKNLGSVENFQLFQNFLGLILSDVEEGSHIFDSMINLKVLNLSSNIINDLAPN
VFSNLSKLEMLDLSVNNIDTWTADVNNLHNLNYLNLRFNAIHNLPDYLRTKLEDNMKRHR
RRFKIDLRNNTITCKCEDKDFLQWMVRYKSNMVSFRDYIFEDSTGKRISADVFIAKVKRL
DKECRSYTLVIVLSSVALATFLAILIGGIVYRNRWKLRYLIRLSKLRHFGYRNITDEAEN
TDYLYDAFISYADENSQFVSDNLVPYLENHGAKLCVHGRDFMPGRNVIDNILHAIRNSKK
TVAIISDDFVKSNWCMYEFNMARMDNIYSRDGSNCLVVVMYENIPARHMSNEMLAWIQLN
TYLEYTTNNEGEQLFWQSLCEAIVN
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttttggatatttttcattatcatacatgtaagtgccaaaggccgttactca
tgtggaccggatggaaaatgtttctgttattctaacggggaaatggactgttcaaggaca
atgcttccattaagttatatttgtgaacatattggtaatattacaaaacagaacatttcc
accttacatgtagagaacaatgacataagagtaattggggcaaaagatctagaaagatgt
gaaagactctccagtttgttcctatccggaaacaatataagtaaaacaagtaactattct
ttcagctatttcgaaattcttgaagtccttgacattagtcacaataatttgcgtgtgtac
gttgaagacggcgaacagattcctgtttttccaacttccttgacaacactgaagcttaac
ggaaactttgagcccaacatgaccgaaaatgaagcatatccgaacctgcaatacttgaat
caactaacagagttgtacatcgatggtttgaaaaacacattttttccgaaaagttatcgt
agcatcaaaactttgaaacagttggaattgtctggactaaatggatactgcaacttgcct
cttgtcaccaacagaacctttgaaaatttgatatatttgcgagagttaaatctgtcttca
tgtaatattacacgtatacacgccggggcatttcagaaactttcaatgttacaaatctta
gacttgtctaagaacatgcagctgggatttcggtgtatgagaaatgtatctttcagcctt
cagtttacagatatacaaaatcttaattattcgcaagtgtacacgacgtttgggattggt
acacaagttcagaaaagagatttctgctttctttggaatacaaccttgcgggagctatct
gtcaacagtaatcgtctgagactgtttgaaacaaacgcacttttgctccttccaaaaaca
cttaacatagtccacatggaggataacaaatttacatttaccccctatcttttgcagcta
ggttgcatgtcaaacttaaccaagttgtacaccaatagacagaattcagctcacaaaccg
agtttatattttcagcagccagaaaatatagtacctaagtttgaccctgatgtagaagac
tgcccttttatgaaggaggacttcttacgtaacatcagtgaatctatagctgggtgtact
tatttcgagccaaacaaaccaatagacttcaaaaagaattttcctaaagttcccaaacaa
ttaaaagaggttcatatgtccgacagcactcttcattataatgttactaccattttcatc
gatccaccaaacaataaccttgaatacattgatctttcagggaacatcttgtattcgtgg
actaaacctgtaggaccgtttccaaaattgaaatatttggatttgtcccgcaactacgga
atacaggtgacacccacagcaaccaagaatcttgggtcagttgaaaattttcaactgttt
caaaatttccttggattgatattatcagacgtcgaggaaggctctcatatatttgacagc
atgattaaccttaaagtactgaatctttcatctaatatcataaatgacctagcaccaaat
gtcttttctaatctctctaagcttgagatgttagatcttagtgtaaataatatcgacaca
tggactgccgatgtcaataacttgcacaatctgaactacttaaatttgagattcaatgcc
attcacaaccttcccgactatcttagaacgaagttggaagataatatgaaacggcacagg
agaagatttaaaattgacctgagaaacaacacgataacttgcaagtgtgaagacaaagat
ttcttgcagtggatggttagatacaaaagtaacatggtaagctttcgagactacattttt
gaagacagcacggggaaaagaatatcagcagacgttttcatagcaaaggtcaaaagactt
gataaagaatgccgatcatatactctggtgatagttctcagttctgttgccctggcaact
tttcttgcgattttgattggtgggattgtctaccgaaaccgttggaaacttcggtatcta
atacgactgtctaaactacgacattttggatacagaaacattacagatgaagctgaaaat
actgattacttatatgatgcatttatatcatatgccgacgagaattcccagtttgtatca
gataatcttgttccatatcttgaaaaccatggtgcaaagctatgtgtacatggtagagat
ttcatgcctggaaggaacgttattgacaatattctacatgctataaggaacagtaagaaa
acagttgcaatcatttcagatgacttcgtgaaaagtaactggtgcatgtacgaattcaac
atggcgagaatggacaatatttactcacgtgacggatcaaattgtctggtggtggtgatg
tatgaaaacattccagccaggcatatgtcaaatgaaatgttagcatggattcagttaaac
acttatctggaatacacaacgaataatgaaggggagcagcttttctggcaaagtctttgt
gaggcaattgttaattga
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