Mercenaria mercenaria (northern quahog): 123542401
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Entry
123542401 CDS
T07835
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mmer04054
]
123542401
Pattern recognition receptors [BR:
mmer04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
123542401
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_EndoS
LRR_1
LRR_14
LRR_9
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
123542401
NCBI-ProteinID:
XP_045184171
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Position
19:complement(8189882..8194968)
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AA seq
867 aa
AA seq
DB search
MNISPVIFALILSVAGSSTLPCGPNRACSCNLYNQMDCSGTMLPIWKICEFISNMTYKNI
SYLHMEQNGYRSIDKLDIKGCDKLYEIYFGGNKISVIEKGAFASLDRITLLDISNNSLAV
YDVNVRLNLTFPSTIKTLMLNGNLKVNINSNLSYPDLSYLISLEALYMDGIRDKIIPVSY
RWLSRLQTVALSGLNGKCNIKQITNSTLENIPYVKNLNMSSCQIENIDAGAFNNMRHLEI
LDLSQNFRLGFRVLKNITYSLQFTNISCVNYSQVHSTFGLGTQIRIQDVCYVWNTSLTEI
VFNSNRLQSFETNALILLPHTVRKMRVEDNTFTFGPYLLQLGCMENVNEIYANKQNTAHN
PILFQNEPIDTYNENTRNNSYCPYMQNEFLKNISRLNNRCPYFKDDKINIYKNWPMFPRK
LKRLEFSQSDMRYRLTQFQVFPPLDFMEYLDVSGNILYSWIGPIGPFPNLKYLNLSRNYC
SHIGSKFFDKFSSVENLQLQENFIGLVLSDENYGPVVFDKLVNLKVLNLSSNIISSLPPK
VFAKMSKLETLDLSVNNIETWTIETNTLHSLLHLNLKLNFFHTLPTMLTKKLEVNAKRLG
KQFTIDLRNNVITITCEGKEYLKWMVEHKKNFLHFNEYIFHDKGGAKLSVNGFLKVVNTI
EKECRSYLGLIVLNSIAITLFFAIVTAGFIYKNRWKLRYMMRITKIRHFGYNKLYNHPNE
EGNFIYDAFISYANEDLRFILDKMIPNLERQGKQLCIHDRDFIPGNNIADNIIDAIRSSR
KTVVILSQNFLKSKWCLYEFNIARMESIYSRDGVNCLLVVMFGDVPTKLMTTEMLDWIKS
NTYIEYTTDEDGELLFWENMKEALMNI
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcagtccagtaatattcgctttgatcttatctgtagctggatcaagcacgtta
ccctgtgggcctaatagagcatgctcctgtaatctttataaccagatggattgctccggg
acaatgcttccaatatggaaaatttgtgaatttataagcaacatgacatataagaatatt
tcttatctgcatatggaacaaaacggctacagaagcatagacaaacttgacataaaggga
tgtgataagctgtacgagatatactttgggggaaataaaatcagcgttatagagaaaggt
gcgtttgcaagtcttgatcgtatcactttactcgatattagcaacaacagtttggctgtc
tatgatgtaaatgttcggctaaaccttacatttccgtcaacaatcaagacgctgatgttg
aatgggaatttgaaagtaaacattaatagtaatttatcatacccagatttatcatatctc
attagccttgaagcgctatatatggatgggatcagggacaaaataattcctgtgagttat
cgttggctttcaaggttgcaaactgtagcactatctgggttaaatggaaaatgtaacatt
aaacaaataacaaattcgacattggaaaacattccttatgtaaaaaatttgaatatgtct
tcttgtcaaatagaaaacatagatgccggtgcatttaacaatatgcgacacttagaaata
ttagacttgtctcagaattttcgccttggatttcgtgtgctaaaaaacattacatacagc
ctacaatttaccaatatctcttgtgtaaattattctcaagtgcatagtactttcggctta
ggcacccagatcagaatacaggatgtatgttacgtttggaatacatctttgactgaaatt
gtcttcaacagtaaccgccttcaatcttttgaaacaaacgcactgatattattgcctcac
actgttagaaaaatgcgagtagaggacaacacatttacgtttggaccttacttactgcaa
ttgggatgtatggagaatgtcaacgaaatttacgccaataaacaaaatacagcacacaac
ccaattctatttcaaaatgagcctattgatacctacaacgaaaacactagaaacaattct
tattgtccatatatgcaaaatgaattcttgaaaaatataagcaggttgaataacagatgt
ccttattttaaagacgacaaaattaatatatataagaattggccaatgttcccaaggaaa
ttaaaaagattggaattttctcagtcagatatgagatatagactgacacaatttcaagtt
tttccacccctcgacttcatggaatacctagatgtttctggaaacattttgtattcttgg
ataggacccatcggtccctttccaaatttgaaatatttgaatttatcacgaaattattgt
tcacatattggatcaaaattctttgataagttctcaagcgttgagaatctgcaactgcaa
gaaaatttcatcggtttagtgctttcagatgagaactatggacctgtagtgtttgataaa
ctggtaaaccttaaagttttaaatttatcatcaaatatcatttcttcccttccgccaaaa
gtatttgcaaaaatgtcaaagctagagacactagatctgagtgtgaataacattgaaact
tggactatagagacgaatacattgcacagtctgctacatttaaatttgaaattaaatttt
ttccacactctccctaccatgctcacaaagaagctggaagttaatgcaaagcgattggga
aaacaattcacaattgatcttagaaataatgttattacaatcacatgtgaaggaaaagaa
tatttgaaatggatggttgaacacaaaaaaaatttccttcatttcaatgaatacatattt
cacgacaaaggaggtgcaaaactgtcagtgaatggttttctaaaagttgtaaatactatt
gagaaggaatgccgctcgtacctaggtttaatagttctaaattccattgcaattacttta
ttttttgccattgttactgcgggttttatctataaaaatcgatggaaactaagatacatg
atgaggataactaaaattaggcattttggctataacaaattatataatcatcccaatgaa
gagggcaattttatatatgacgctttcatatcatatgctaatgaagatttgcgttttatc
ctagacaagatgattccgaaccttgaaagacaaggcaaacaattgtgcattcacgatagg
gactttatacctggaaacaatattgccgacaatattatagatgctataagaagcagcaga
aaaaccgtcgtcattctttcgcaaaacttcttgaaaagcaagtggtgcctttacgagttc
aatatagcgagaatggaaagcatctactcgcgagatggagttaattgccttctagttgta
atgtttggagacgttccaacaaaacttatgactacagaaatgttagattggataaaatca
aatacatatatagagtacacaactgacgaagatggggagctgctcttttgggagaatatg
aaagaagctttaatgaatatttaa
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