Mercenaria mercenaria (northern quahog): 123542785
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Entry
123542785 CDS
T07835
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like isoform X1
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04080
Neuroactive ligand-receptor interaction
mmer04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123542785
04082 Neuroactive ligand signaling
123542785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123542785
Ion channels [BR:
mmer04040
]
Ligand-gated channels
GABA-A
123542785
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5367
DUF6057
DUF2070
Motif
Other DBs
NCBI-GeneID:
123542785
NCBI-ProteinID:
XP_045184720
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Position
19:15861275..15876440
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AA seq
379 aa
AA seq
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MDNDTVIHDLEDGINANSHPVNKKRNVYVKVNFLKVTDIDTIKEVFHADVLVKVRWREPS
LDNAKDLSVSDFSKYWNPKIVISNSAPNATCKTWRAAKLAKDGEAFITEKFRIKGVFAEN
LELHDFPFDVQDLSIVVSSELDDDVVDIVEDNEEVSAVNVLCFVDDTEWTVRDLVYSEPR
TFNKEIAETQFKNPALLVKCVATRNAGFFLYNIILIMTMISTLSLTTFAVDKALIQNRLQ
LAFIITLTGVTFKMVSNQSLPKIPYLTHLDRFIIGSMVFNWLVCIWHAILSQYKNDSNQG
DMDRIAFFTLIGLLGFFHLVFWLLVLIKRIYQEFKLKDREAVYQEKALRLMGSTWKSDRM
NRRRKVTRKNKIDAGGNFV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggataacgatacggtaattcatgacctcgaagacggaataaatgcaaatagtcaccca
gttaacaaaaagagaaatgtgtacgtgaaggtcaactttctgaaggtcactgatatagac
acaataaaggaagtgtttcatgcggatgtcctcgtaaaagttcgatggcgggagccgtca
ttagacaacgccaaggacctatcagtgtccgacttcagtaaatactggaatccaaagatt
gttataagcaacagtgcgccaaacgccacgtgcaaaacatggagggccgcaaaacttgct
aaagatggagaagcgttcatcacagagaaatttagaattaaaggtgtttttgctgagaat
ttggaattacacgacttcccttttgatgttcaggatttgtcaatagttgtgtcttcagag
ttagacgatgacgtagtggatattgtagaggacaatgaggaagtttctgcggtaaacgtt
ctttgttttgttgacgatacggaatggactgtacgtgatttagtgtattccgaaccgagg
acgttcaacaaggagatagcggagacgcagttcaagaatcccgcactgcttgtgaaatgt
gtggcgacaaggaacgccggatttttcctctataatattattctaattatgacgatgata
tctacattatcattgactacatttgctgtcgacaaagctttgatccaaaaccgacttcag
ttagcatttattatcaccctgacaggagttacattcaaaatggtgtccaaccaaagtcta
ccaaagatcccataccttacacatctggaccggtttataatcggaagtatggtatttaac
tggttagtttgtatctggcacgccattttgtcacaatataaaaacgacagcaaccagggt
gatatggacagaattgcattcttcacgttaatcggtcttctggggttctttcatcttgtt
ttctggctgttggtccttataaagagaatataccaggagttcaaactgaaagatagagag
gcagtttatcaggaaaaggcattgcgtttgatgggatctacctggaagagtgacagaatg
aacagaaggcggaaggtcacacgaaaaaataaaatagacgcaggtggaaatttcgtctga
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