Mercenaria mercenaria (northern quahog): 123542929
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Entry
123542929 CDS
T07835
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123542929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123542929
Spliceosome [BR:
mmer03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123542929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
YkyA
Motif
Other DBs
NCBI-GeneID:
123542929
NCBI-ProteinID:
XP_053387112
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All DBs
Position
19:28627286..28703478
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AA seq
671 aa
AA seq
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MSLTDREWDDLKALLDKAVNKFLGFSEPSLVTAALNCIDKGYDERKTADKLQAILDERQA
PMFAEKLFDVWENYRSSSKSQRSKRRKFQDDRDDRDEGRKKAKFEEIPETPEGPSPGQLT
EEKIKEMMQTAQKLIQERKAQMAVQMPSAPPAPSQNTQAQKFMNDAKEKAKRANELQAQI
QARMASLAGLPAPMKGMPPVKAMDKANEGQTKAAPVSNPTPLILDSEGRTIDAKTGQAIT
LTHHAPTLKANIRAKRREQFKGLIDAPPEEISASKYFDPRVTLLGAQRQKRGFRFHEKGK
FEQLAQRLRTKAQLDRLQSEISHAAKKTGIASAAKLATITPKKELVEGEIPDIEWWDAYV
LRQVDSYEGVPDKEELRSRLEGVTHLVEHPIQMKPPAEPDKPPAVPVYLTAAERKKLRRQ
NRTEAQKELQEKIRLGLAPPMEPKVRMANLMRVLGSEAVQDPTKVEAHVRAQMAKRQKAH
EEANAARKLTKEQRRDKKIEKIKEDTSLGVHVSVYRVNDLSNPSKKFKVETNAKQLYMTG
IVVLFKDCNIVVVEGGPKQQRKFKRLMMHCIFSGPKQQRKFKRLMMHRIKWEEDKQRKKK
DADGETDETESRNRCVLVWEGTTKNRAFGEMKFKVCPTEAFAREQFRKHSVESYWDLSFS
GAVLETAGEEV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacagacagagaatgggacgatctgaaggcattgcttgacaaggcggtcaac
aagtttctaggatttagtgagccatccctggtgacagctgctcttaactgtatagataaa
ggatacgatgagagaaaaactgcagataagctacaggcgatactggatgagagacaagcg
ccaatgtttgccgagaagttgtttgatgtatgggagaattaccggtccagtagcaagtca
caaaggagtaaacgtagaaagtttcaggatgatcgggatgacagagatgaaggtcgaaag
aaagcaaagtttgaagagatccccgagacaccggaaggaccgagtcctgggcaacttaca
gaggaaaaaatcaaggaaatgatgcagacggcacagaagttgatccaggagcggaaagct
cagatggctgttcagatgccctctgcccctcctgccccatcacaaaatacacaggctcag
aagtttatgaatgatgcaaaggagaaggcaaagagagcgaatgaacttcaggcgcagata
caggcacgtatggcgagccttgctggtctccccgctccgatgaaaggaatgccaccggtt
aaagctatggataaggccaatgaaggtcaaacgaaagctgctccagtttcaaatccaacg
ccattgattttggacagtgaaggtagaactatagatgccaagacaggccaggccatcaca
ctgacacaccatgctcctacattgaaggcaaacatcagagcaaaaagacgagaacagttt
aaaggattgatagatgctccaccagaagagatcagtgcttccaaatactttgatccccga
gttactttactaggtgcacagagacagaaacgaggcttcagatttcacgagaaaggaaag
tttgagcagcttgcccagaggttgaggaccaaggcccagctagacaggttacagagtgag
atcagtcatgcagcaaagaaaacaggaattgcatcagctgctaaacttgcaacaattact
ccaaagaaagaattggttgaaggtgaaataccagatatagagtggtgggacgcctatgtt
ttaagacaagtagattcgtatgagggtgtgccagacaaggaggaactacgatcaaggctg
gaaggagtcacacacctggtagaacatccaatacagatgaaaccaccagctgaaccggac
aagccacctgccgtgcctgtttatctaacagccgcagaacgtaaaaagttacggcgacaa
aataggacagaggcccagaaagagctgcaggagaaaatacgtcttggtttagccccgcct
atggaacctaaagtacgaatggccaacttgatgcgagttcttggttccgaagccgttcaa
gacccaacaaaagttgaagcccatgtcagagcacagatggccaaaagacaaaaagctcat
gaagaggccaatgcagcaagaaaattaacaaaagaacagagaagagataagaaaatagag
aagataaaagaagatacttcgttaggagttcatgtttcagtctacagagtgaatgatctc
agtaatccatctaagaaattcaaagtagaaacaaacgccaaacagctctatatgacaggg
atagtggtgctgtttaaagactgtaatattgttgttgtagaaggtggaccaaaacagcag
agaaagtttaaaaggttaatgatgcattgcatattttcaggaccaaaacagcagagaaag
tttaaaaggttaatgatgcatagaataaaatgggaggaggataagcagaggaagaaaaaa
gatgctgatggggaaactgatgaaacagaaagtaggaatagatgtgttcttgtttgggag
ggtactacaaagaaccgagcattcggagagatgaagtttaaagtgtgtcctactgaggca
tttgctagagaacagtttaggaaacacagtgttgaatcatactgggacttgtctttcagc
ggagctgtattagagacagcaggggaagaagtgtga
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