Mercenaria mercenaria (northern quahog): 123544989
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Entry
123544989 CDS
T07835
Name
(RefSeq) protein transport protein Sec23A-like isoform X1
KO
K14006
protein transport protein SEC23
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123544989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123544989
Membrane trafficking [BR:
mmer04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
123544989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
123544989
NCBI-ProteinID:
XP_045187124
LinkDB
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Position
1:11436943..11458040
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AA seq
769 aa
AA seq
DB search
MATYQEFIQQNEDRDGVRFSWNVWPSSRLEATRMVVPLGSLYTPIKERPDLPPIQYDPVM
CTRPTCRAILNPYCQVDYRAKIWSCNFCFQRNPFPPQYAAITEQHQPAEIIPQFSTIEYT
ITRANCAPPVYLIVLDTCMDDDDLQAVKESLQMSLSLLPPNALIGLITYGKMVQLHELGC
EGCSKSYVFRGTKDLTAKQIQDMLGFGKGAAPAQNRGPQQQQQLPSNRFLQPVHKCDFSL
TDLLGELQRDPWPVAQGKRPLRSTGVALSIAVGLLECTFPNTGARIMLFMGGACTQGPGM
VVGEELKFPIRSHHDIEKDNCKYMKKAMKHYEGLANRAASNGHVIDIFSCALDQTGLHEM
KFCSRYTGGHMVMGDSFNTSLFKQTFQRVFSKDAKSEFKMAFGATLEVKTSRELKVSGAI
GPCVSLGVKSSSVSDTEMGLGGTCQWKMCGVNPNSTLAFFFEVVNQHNAPIPQGGRGYIQ
YITQYQHSSGQRRVRVTTVARNWADASTNIQHIAAGFDQEAAAVLMARTAVFRAETDDGP
DVLRWLDRMLIRLCQKFGDYHRDDPNSFRFSENFSLYPQFMFHLRRSQFLQVFNNSPDET
SYYRHMLNIEDLTQSLIMIQPILYAYSFSGTPEPVLLDTSSIQPDRILLMDTFFQIVIYH
GETISQWRAQKYQDLPEYENFKQLLQAPVDDAQEILQTRFPMPRYIDTEAGGSQARFLLS
RVNPTQTHNNMYAYGAGGAGDASAAVLTDDVSLQVFMEHLKKLAVSSSS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttatcaagagtttatacaacagaatgaagatagagatggggtgaggtttagt
tggaatgtgtggccgtcaagtcgtcttgaggcaacaaggatggttgttcctcttgggtca
ttgtataccccaatcaaagaaagacccgacttgcctccaatacaatatgatccagtcatg
tgtacaagaccaacatgtagagcaattttaaacccttactgtcaagttgattacagagct
aaaatatggtcatgcaacttctgtttccagaggaatcctttccctccccagtacgcagcc
attacagaacagcaccagccagctgagatcatacctcagttctcaaccattgagtacaca
attactagggcaaattgtgcacctccagtgtacctgattgtgctggatacctgtatggat
gatgatgatctacaagctgtcaaggaatccctacagatgtcactgagtctgttaccacca
aatgcattgattggtctgatcacatatggtaaaatggttcagctacatgaactcggttgt
gagggatgttcaaaaagttatgtgttccgaggaacaaaggatcttactgctaagcagata
caggacatgcttggttttggtaaaggagcagccccggctcagaacagaggtcctcaacaa
caacagcagttgccttctaacagatttttacagccagtacacaagtgtgacttcagcttg
acagacctgctgggtgaacttcagcgtgatccctggccagtggcacaagggaagagacca
ctgagatctacaggggtggcactctctattgctgtaggattactggagtgtacatttcca
aacactggagcaagaatcatgttgtttatgggtggggcttgcacccagggtcccggtatg
gtggtgggagaggagctaaagtttccaatcagatctcaccatgacattgagaaggacaac
tgtaaatacatgaagaaagctatgaagcattatgaaggactggcaaacagagcagctagt
aatggccatgtgattgacattttctcttgtgcccttgatcagactggtctacatgaaatg
aagttctgttccagatatacaggtggccatatggtgatgggtgactccttcaacacatca
ctgttcaaacaaactttccaacgggtgttttcaaaggatgcaaagtcagagttcaaaatg
gcatttggagcaacattagaagttaaaacatcaagagagttgaaggtgtcaggagctatt
ggaccttgtgtgtctctaggagtgaagagctcatctgtatcagatacagagatggggctt
ggtggaacttgccagtggaaaatgtgtggagtgaatccaaattcaacattagctttcttc
tttgaagttgtaaaccagcataacgcaccaatacctcagggcgggagaggttatatacaa
tatataactcagtatcaacactctagtggtcaaagacgggtcagagtcacaaccgtagcc
agaaattgggcagatgcaagtacaaatatacagcacattgcggctgggtttgaccaggaa
gctgcagctgttcttatggcgagaactgctgtatttagagcagaaacagatgacgggcct
gacgttttacgatggttagatagaatgttaatacgtctttgccagaagtttggagattat
catcgggatgatcccaactcgtttagattctcagaaaacttctccttatacccacagttt
atgtttcatttacgacgttcacagtttcttcaagtatttaacaacagtccagatgaaaca
tcttattataggcatatgttgaatatagaagaccttacacagagtttaattatgatacaa
ccaatattgtatgcatactcttttagtggcactccggagcctgttttactggatacaagc
agtatacagccagacaggattctgttgatggacacttttttccagattgttatatatcat
ggagagaccattagtcagtggcgtgcacagaaataccaggatctaccagagtacgagaat
ttcaaacaattactgcaagcacctgtagacgatgcacaggaaattctccaaacaagattt
cctatgcctagatatattgatacggaggctggtggctcacaggcgagatttttgctgtca
agagttaatcctacacagacacacaataacatgtatgcatatggagctggaggagcaggg
gatgccagtgcagctgtactgactgatgatgtcagtctacaagtatttatggaacactta
aagaagcttgctgtatcaagctcctcttga
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