Mercenaria mercenaria (northern quahog): 123545081
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Entry
123545081 CDS
T07835
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123545081
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123545081
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
123545081
NCBI-ProteinID:
XP_053394670
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Position
1:6313248..6346437
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AA seq
757 aa
AA seq
DB search
MFFKFIRESLQGPRQYNKKTINVPVFSNLLENLRCHSTDEYPVISSEDESPIPPLACSFS
KGKRTGHILALVDECGSVVLYNTNLAGDQAYITDWVAHNNAVFDVEWMAQEQKLLTASGD
QTIGLWDVPSKKKLLTFKGHSSSVRSVRYRPQDDAVFASGSRDGHVRLWDTRCNVTGEKV
SCVGVIKNAHSISQQASSRRKKSRLGPAQDCQQSVTSVLFQNDNLLTTSGAVDGCVKVWD
IRKIKSDCAAAVYNFPYTGISKRTHGFSSLTFDTYFTKLFANCTDDMIYCYDFISYKPEP
VCTYKGHRNTSFYVKSVLSPDNEFLLSGSTDEHAYIWQVSKPNASPVILKGHRSEISDVA
WCKTDLFRLVTTSDDNTVRVWRYDSTAELRKKLGRTDISCGITGSAERTHRDIGTSVDPG
PQTPKRSPKSALKRSATLPFGPVKAVTPKQSKTSISASPSPSIKMWLKRSASAPSADTLR
SSINQTVSPTADSKGQSSGAERCVGSEHSAAGPSASEEASCSPAKKQKLETLVSERDSSR
DNRLAENNKAESVKGDIQENEKPTVRKSCKRKLVDDTSPQKCKKQRVGSDMDSENFNVIT
EDKENSPSPQKEKTLFKDSYSEFSDSPAKKQVVFTDAIQSPARISLKELDSNIYQSPTAN
LPNLVVDGPQRKNQTGMDEDKKKGVDWLTQMRIQKMAKQSPQNKKCRGKLLDKLCESSST
ESSQETERSPVSSPKVKSPVHGVRSITSFFARPALKS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgttctttaaattcatcagagaatcactacagggaccaagacaatacaacaaaaagact
ataaatgtgcctgtgttttcaaatctgttggagaatttaagatgccatagcactgatgag
tatcctgttatcagctcagaagacgagtcgccaatacccccgctggcctgtagtttcagt
aaaggtaagagaactggacatatattagctctggtagacgaatgtggcagtgtggttttg
tacaacaccaacttagctggtgatcaggcctacatcacagattgggttgcacacaacaat
gctgtgtttgatgtagaatggatggcacaggagcagaagcttctgacagcatcaggagat
caaactataggtctatgggatgtaccaagcaagaaaaaactactcaccttcaaaggacat
agcagttctgtaagatctgtaagatacagaccacaagatgatgctgtgtttgcatctgga
agcagagatggacatgttaggctgtgggacacgagatgtaatgttacaggtgagaaggtg
agctgtgtaggtgtgataaaaaatgcccacagtatatcacaacaagcttccagtaggagg
aaaaagtctcggctaggtccagcacaggattgccaacagtctgtcacaagtgtcttgttc
caaaatgataatctgttgaccacatcgggggctgtagatgggtgtgtgaaggtatgggat
ataaggaagatcaaatcagattgtgcagcagctgtgtataattttccatatacaggcatt
tctaaacgaacacatgggttttccagtctgacatttgacacatattttacaaagttgttt
gctaactgtacagacgatatgatctactgctatgatttcatctcgtataaaccagaacca
gtatgtacctataaaggacacagaaatacgtcgttctatgtgaaatctgtactgagtcca
gacaatgagtttttactgagtggatctaccgatgagcatgcctatatttggcaggtatct
aagcccaatgcaagtcctgttatactgaaaggtcatagaagtgagatatctgacgtggct
tggtgcaagactgatctatttaggctggtgacaacatcagatgataatacagtacgtgtg
tggagatacgattctactgcagaattgaggaagaaattaggaaggactgacatctcatgc
gggatcactgggtcagctgaaagaactcacagagatattggaacgtcagttgatcctgga
ccccagacaccaaagcgctctcccaagtcagccttgaaaaggtcagcaactcttccattt
ggtccagtgaaagcagtgacaccaaaacaatctaagaccagcatatctgcatctccctcg
ccatccatcaaaatgtggctcaagcgtagtgccagtgcaccgagtgcagatactctcagg
tccagcattaaccaaacagtttctcctacagctgatagcaaaggacagtctagcggggca
gaaagatgtgtaggaagtgaacattccgctgctggacctagtgcatccgaggaagcatct
tgcagtccagctaagaaacaaaaacttgaaactctagtctctgaaagagacagtagcaga
gacaatagacttgcagaaaacaataaagcagaaagtgtgaaaggagacattcaggaaaat
gaaaaacccactgtaagaaaatcttgtaagagaaaattagttgatgatacttcaccacaa
aaatgtaagaagcaaagagtgggtagtgatatggacagtgagaattttaatgtgataaca
gaagacaaagaaaatagtcccagtccacaaaaggaaaagactttatttaaagactcatac
tctgaatttagtgatagtcctgccaaaaaacaagttgtattcacagatgcgatccaatct
cctgccagaatttcattgaaagaactagatagcaatatttatcagtccccgacggctaat
ttaccaaatctagttgttgatggaccgcaaaggaaaaatcagacaggcatggacgaggac
aaaaagaaaggtgttgattggttaactcagatgaggattcagaaaatggcaaaacagagt
ccacagaataagaaatgtcgtgggaaactgttggataaattatgtgagagttctagcact
gaatcttcacaggagactgagagaagtccagtatcatcacctaaagtcaagagccctgtg
catggagtacgctcaataacatctttctttgctcgaccagctttgaaatcgtga
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