KEGG   Mercenaria mercenaria (northern quahog): 123545086
Entry
123545086         CDS       T07835                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA annealing helicase and endonuclease ZRANB3-like
  KO
K25861  DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
Organism
mmer  Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmer03032]
    123545086
   03400 DNA repair and recombination proteins [BR:mmer03400]
    123545086
DNA replication proteins [BR:mmer03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    123545086
DNA repair and recombination proteins [BR:mmer03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    123545086
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HNH Zn_ribbon_RanBP HNH_5 MYND_ZMYND11_ZMYD8
Other DBs
NCBI-GeneID: 123545086
NCBI-ProteinID: XP_045187299
LinkDB
Position
1:5968790..6124723
AA seq 1442 aa
MVFQSLPKQLVDRLMPFQKEGVKFAVGKHGRCLIADEMGLGKTLQAISVAYYYKNEWPLL
IIVPSSLRYSWIEEFEKWLPDINPGDINLVQSGTDVSDIGSARVTITTFGLLSKGTSRIL
REALMNQGFHVVIVDESHYIRNNKTVSAKTVVPLIKNAXILLSGTPALARPVELYPQIDA
ICPDEFGTWWTYTARYCDARLEWIGKVKRRNVNGASNLEELQQRLSEKLMIRREKSQVLT
QLPPKQRQRVLFELKDSELKKEIRQTFDELRPLMKRSNQDNFEVLTGGGEHDGKDTNMLS
LIQRLYKLSGTAKIGPAKEYIEMLCENPNLKFLVFAYHHDMMNGLSESLHDKKVKFIRID
GETPPSERPHLVHQFQSDPDTRVAVLSILAAGVGLTFTAATVVVFAEMYWTPGTMIQCED
RAHRIGQTCCVAVHYLVAKDTMDEWVWSVVCKKTIVTSTTLTGKKRKMEAMEGDRYQVDV
LSNAEAWVPASNNETCNLTEYFETTLDSSQKSILHFFSPKHIAMKRKLKQASENQVDERD
INGVNDIVDIEEDRGTLEEVAIDHMCHTPASKRQKIDPSVYSHSIAKEPVTKKSSEGKDH
IIVLDSDGEDDFVDSNCKNKSQKSFSSSKKRKSRSVNHSSVSPKYSLHAMFEKAGTREVL
NGSIDISGDNEHTPVKGAGSTKAENENKEDNSNTNVSGFGRNEWSCSQCTYLNHRDLVYC
EMCETPRKCKAISKSHHTNSAKVNSLKHGTETWKKLPKPKNKQESDGQKENMIDSKFDSQ
TRSVSRKTQDTEDEEDGIHYIDDTIDFDPGSDHDETTKELTEPVESVTDTFKDDYSIDEY
GSPDSEFVSEVQEGIEQPGTLEENQIVDEVSLETVRSEELTKENVGVINNDKRNDTGLQK
KLGKEDSKSFSCSLQSKYFDRTKSTNTTPHPLRKKEIIIENNLKLNTSVNQKDLQDNKHV
KSMCNIEATKISEDESFTPTSGKKYRFKSVRKGNGVHNSPGVLSPSRYNVEIVKPKGNTS
ERKNDKAEDTWKTEADYDTMDIPGVQDCGSLSLVTVQTEKLSDTVVAKECTPKTGQTNND
YSFSSPELDQMLATETEDVSKPAVEERRVVDLHTVPVHSMFKYQCSKYTDRIYLLSRDEE
ALDLNFIPSDVQFGNDDGLPDILLHPDNLRLVQRFVREWLSLTETKRRLIVKSGQPFISP
LQQYEKLKSCKTVNTQRHKTKDDTSQVAYQKTKDINGSVRIVSKHAGVHSENSGEGGVTQ
AVSADGTPLCLQCFQPYTNHLVTKSTIQDENNAWNTRFCSQKCSQEYWMVSNNDYIRDRV
FEAEHGICQLCKFDAHSLFRQIRDTRDQRKRAEIVTSSKFNSLTIKIKEQMVRKPAAGQF
WHVDHIVPVWEGGGQCDIDNLRTLCVICHQKVTAKQAAKRATVRKLGSAVNSGDITAFFQ
RN
NT seq 4329 nt   +upstreamnt  +downstreamnt
atggtatttcaaagtttaccgaaacagttggtggatcggttaatgccatttcagaaagaa
ggtgttaagtttgctgttggaaaacatggacgatgcctgattgctgacgagatgggtcta
ggaaagacactgcaagccatatcagttgcatattactacaagaatgagtggcccttgctg
attattgtcccctcctccctcaggtattcatggattgaagagtttgagaaatggttgccc
gacattaatccaggggatataaatcttgtacagtcaggcactgatgtcagtgatattggc
tcagcccgtgttaccataacaacatttggtttgttgagtaaaggaacaagtcgtattcta
cgagaggcgttgatgaaccagggattccatgttgtcattgtcgatgagtcacattatata
cgcaacaacaaaacagtgtcggcaaaaactgtagtcccgctgatcaagaatgcgnntatc
ttgctgtctggaactccagctcttgctagaccagttgaactgtatcctcagatagatgca
atatgccctgatgagtttggtacctggtggacgtacacggccaggtattgtgacgccagg
ctagaatggattggaaaggtcaaacggagaaatgtgaatggtgcaagtaatttggaagag
ttgcagcagaggctgtctgaaaagttgatgattcgccgagagaaaagtcaggtacttaca
cagctgccacctaaacagagacagagagttctctttgaattgaaggattcagaattgaaa
aaggaaatcagacaaacatttgatgagttgaggcccctgatgaagaggtctaaccaggat
aattttgaggttctgactggaggtggggaacatgatggcaaggatacaaacatgttatca
ttgatacagagactttacaagctcagtggtactgcaaagataggtcctgcaaaggagtat
atagagatgctatgtgagaaccctaacttgaagttcctggtatttgcctaccatcatgac
atgatgaatgggctcagtgagagcctgcatgacaagaaggtaaagttcatcaggatagat
ggtgaaactcctccctctgaacgaccacacttggttcatcagttccagtctgaccctgac
acaagggtggctgtcctcagcatcctagctgctggagtgggattgacattcacagcagcc
actgttgtagtgtttgctgagatgtactggactcctggtactatgatccagtgtgaggat
cgcgcccacaggatcggccagacatgttgtgttgcagtgcactatctggttgctaaggat
acaatggatgaatgggtgtggtctgttgtctgtaagaagaccatagttacatctactact
ctgacaggaaagaaaaggaagatggaagctatggagggggaccggtaccaggttgatgta
ctctctaatgctgaggcatgggtaccagctagcaataatgaaacttgtaatctcacagaa
tactttgagactactttggattcaagtcagaagtccattctacatttcttctcacccaaa
cacatcgcaatgaagagaaagctgaaacaggcatctgaaaaccaagttgatgaaagagac
attaatggtgtaaatgatattgtagatatagaggaagatagaggtacactggaagaagta
gctattgatcatatgtgtcatacaccagccagtaagagacagaagatagatcctagtgta
tatagtcatagtattgctaaggaaccagtgactaagaaaagctcagaaggaaaggaccat
atcatagtattagatagtgatggggaagatgactttgttgatagtaactgtaagaataaa
tcacagaagtctttcagtagttccaaaaagcgaaaaagtagatctgtaaatcattcttca
gtatctccaaaatacagcttgcatgccatgtttgaaaaggcagggactagggaggttttg
aatggaagcattgatatatcaggagataatgaacatactccagttaaaggtgcaggaagt
actaaagctgaaaatgaaaataaggaagataatagtaatactaatgttagtggatttggc
aggaatgaatggagttgcagtcagtgtacttacttaaatcacagagatcttgtgtattgt
gaaatgtgtgaaacaccaaggaaatgtaaggctatttctaagtcacatcataccaattct
gccaaggtcaattcactgaaacatggaactgagacctggaaaaaattacccaaaccaaag
aataaacaggagtcagacgggcaaaaggaaaatatgatagacagtaaatttgatagtcag
acaaggagtgtttcaaggaaaacacaagatacggaagatgaagaagacggcatacattat
atagatgatactattgactttgatccaggtagtgatcatgatgagactacgaaagaatta
actgaaccagttgaatctgtaactgacactttcaaggatgattactctatagatgagtat
ggaagtcctgattcagaatttgtcagtgaagttcaagaaggaattgaacaaccaggaaca
cttgaagagaaccagattgtagatgaggtctctttggaaactgtgagaagtgaggaatta
acgaaagaaaatgttggcgtgattaataatgataaaagaaatgatacaggtttacagaag
aaattggggaaagaagactcaaagtctttcagttgttcgttgcagtccaagtattttgac
agaactaagtcaactaatacaactccccacccattgagaaagaaggaaattattattgaa
aataatctaaaattgaacacatctgtaaatcagaaagacttgcaagacaacaaacatgtc
aaaagtatgtgcaatatagaggccacaaaaatatcagaagatgaaagttttaccccaact
tctggtaaaaaatacagatttaaatctgttagaaaaggtaacggtgttcataacagtcct
ggagttttaagtccaagtagatacaatgttgagattgttaagccaaaaggaaatacttct
gaaagaaaaaatgataaagcagaggatacatggaaaactgaggctgattatgataccatg
gatataccaggtgtacaggattgtggttcactgagtttggttactgtacaaactgaaaag
ttaagtgacacagtggttgctaaggaatgcacaccaaaaactggacaaacaaacaatgat
tattcctttagttcaccagaattagatcagatgttagctactgagactgaagatgtaagt
aaacccgcagttgaagagaggagagttgtggacttacacacagttcctgtccattccatg
tttaaataccaatgtagtaaatacacagataggatttatttactctcaagggatgaggaa
gctctcgatttgaattttataccttctgatgtacagtttggcaatgatgatggtcttcct
gatatactccttcatcctgacaacctacgtctggtacagagatttgttagagagtggctg
agtttaactgaaacaaagagaagactgattgtgaaatcaggacagccttttatcagccct
ctacagcaatatgagaaactgaagagttgtaaaacagtcaacacacagaggcataaaaca
aaggacgatacaagtcaagttgcctatcagaaaacaaaagatataaatggtagtgttaga
atagtgtctaaacatgctggagttcatagtgagaacagtggtgaaggaggagtaacacag
gctgtatcagcagatggtaccccgctctgtcttcagtgtttccagccttacacaaaccat
ctagtcacaaagtctacaatacaggatgagaacaatgcttggaacacaaggttctgttcc
cagaaatgttctcaggaatactggatggtgagtaacaatgactacattagggatcgtgtg
tttgaagcagaacatggtatatgtcagctgtgtaagtttgatgcacactctctattcaga
cagatcagggatactagggaccagagaaaaagagcagagattgtaaccagcagtaaattc
aacagcttgaccatcaagattaaggaacagatggttagaaaacctgctgcaggacagttt
tggcatgtggaccatatagttcctgtatgggaaggaggtgggcagtgtgatattgacaat
ttacggacactatgtgtaatctgtcaccagaaagttacagcaaaacaagctgcaaagcgg
gcaacagtgcggaaacttgggtctgctgtgaattccggagatattactgctttctttcaa
agaaactga

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