Mercenaria mercenaria (northern quahog): 123546136
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Entry
123546136 CDS
T07835
Name
(RefSeq) DDB1- and CUL4-associated factor 10 homolog
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123546136
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123546136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
123546136
NCBI-ProteinID:
XP_053407223
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All DBs
Position
9:37714771..37736753
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AA seq
908 aa
AA seq
DB search
MPECKRNTFITRRDREIGCKRRSGDTARSHSSLSASIKAHHTWDPRKTVSDTDHGGIFNF
DFSKDGSLLGAACERKSVLLFDPFNGKLVASKTNAHTDCVNCVKFLDDRLFATCSDDTTV
ALWDTRYLKHNVQTFRGHSNWVKNIEYDSKQGILLTSGFDGCIYTWNINRYSNEESSNKV
FYTSGLMRSKLSPDFSKLIISTHEGYIIVVHNLDLSTLGEDLKGFKPNMYRLMQRSQTPL
RIGLMYNHVFEQERNRVQFIADWPTGNDANIISSLQVHPQGWCMLSRNTDSSENTEWTCV
HELQDDQLEKKITKRPWEMERVTPHTSSAYCTSTNTPAYSSLAPSNQTRPRNPSSSENQS
ENTINQSPSTNTSTNSLNQDLDSSASNQPEDSARNSQGQPLPSGQAASDSSHSDLISSTR
DARSPDTNSNDGTFRPAPVEISGGSQNDSNTGQPESRAAVSPQVTGPIHNSLIQIRRGAR
QEDGSFSFSISVHTSSGRTIEFNQDDLASDDEDTGIRIERIIPNNRPDLDPSNLSLDNSR
QTGMENRSVQQNEPETDSAAAREAAPTGNSETSHEQSRETTSGTERDVTEGELNEGRGTA
SVDSTRNVFLTDGNASDSDSDYDNNIPLPLIDHTIDDDSDSENESEHDLIEEDRYEFSND
SEDEGAVGSSFDIAYTNEETGGEINLTIQDNGGATANVESDRLFRNSGLSRIRRAGNSRS
TRANPSNESRSSAASSSAYPSSVNTNAQNTSPQIANSLDSRPRNNSFMFVLESNTGNRRR
RILNLSYLDSYSESENNQLQKNIHWNRKKLLGYTEECNVGRGFIKEVGFSHDGRLISSPF
GFGLRIFAFDSQCNELCDCIPTSPVKLYEVTCSLAHVNCVVATKFSPVHNMIVSGCLDGK
IAFHQPVL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgccggagtgtaaaagaaatacgtttattaccaggagagaccgagaaataggttgcaaa
agaagatcaggtgacacagcaaggtctcattccagtttgtctgcaagcatcaaagcacat
cacacctgggatcccaggaaaacagttagtgatacagatcatggtggaattttcaacttt
gatttctctaaggatggatctctgcttggtgcagcatgtgagagaaagagtgtgttattg
tttgatccattcaatggtaaattggtggccagcaaaaccaatgcccacactgattgtgtg
aactgtgttaagtttttagatgaccgtttatttgcgacatgttcagatgacacaactgta
gcattatgggatacacgatatctgaaacacaatgtgcaaacatttcggggtcactcaaac
tgggtgaaaaacatagagtatgactctaagcagggtattttactaacatcaggatttgat
ggttgcatctacacatggaatatcaacaggtacagcaatgaggagtcatcgaataaagtg
ttctacactagtggtctaatgcggtccaaattgtcaccagacttctcgaagcttatcata
tcaacacatgaaggctacattattgttgttcataatctggatctctccacattgggtgag
gatcttaaggggttcaagccgaatatgtaccgcttgatgcagcgcagccagactccatta
aggattggacttatgtacaaccatgtgtttgagcaggagagaaatagagttcagttcatt
gcagactggcctactggaaatgacgctaacattatatcatctcttcaggttcatcctcag
ggctggtgtatgttatcaagaaacacagattccagtgaaaatacagaatggacatgtgta
catgaactacaggatgatcagcttgagaaaaaaattacaaaacgtccttgggagatggaa
cgagtcactccccatacatcatcagcttactgtacttctacaaacactccagcttattct
tcattggctccttcaaatcagacacgcccacgcaatccttcatccagtgagaatcagtca
gaaaataccattaaccagtcaccttcaactaatacttctacaaattcattgaatcaggac
cttgattcgagtgcaagcaaccaaccagaagacagtgctagaaattctcaagggcagcca
ctgccaagtggccaggctgcttctgattcaagtcattctgatctcatttcttcaacaaga
gatgcaagatccccagacacaaattctaatgatggaacattcagaccagcgcctgttgaa
atatcaggtggatctcaaaacgattctaatactggtcagcctgagagtcgtgcagctgtc
tcgccacaagttacaggccctatacacaattctttaatacagatccgtcgtggagctagg
caggaagacgggagtttttctttttcaatttctgtacatacttctagtggcaggaccatt
gaatttaaccaagatgatctggcatcagacgatgaagatactggcataagaattgaaaga
ataatacctaacaatagaccagatcttgacccatcgaatctcagtttggataattcgaga
caaaccggaatggaaaacagatctgtacagcaaaatgaaccagaaactgattcagctgct
gcaagggaagcagccccaacaggtaatagtgaaacatcacatgaacaaagtagagaaaca
acttcaggcactgagagagatgtcactgaaggggaattaaatgaaggtaggggaacagca
tcagtggactcaacaagaaatgtttttcttaccgatggtaatgcaagtgatagtgacagt
gattatgataacaacatacccctcccacttatcgatcacactattgacgatgattcagat
tctgaaaatgaaagcgaacatgatttgatagaagaagatcgatatgaattcagtaatgat
tcagaggatgagggggctgtagggtcaagctttgacattgcttatacaaatgaagaaacc
gggggtgaaataaacttaaccattcaggataatggcggtgcaactgctaatgtcgaatcg
gaccgtttgttcaggaattccggtctttctcgaataagacgtgctggtaactcaagaagc
acaagagcgaaccccagtaatgagtctagaagctctgctgcaagttcatctgcctatcca
agttcagtgaacacaaatgcacaaaacactagtccacagatagcaaactcccttgattca
cggcctagaaataactcattcatgttcgtccttgaatctaatacaggtaacaggagaaga
agaattctgaaccttagttaccttgacagctattctgaaagtgaaaataatcagttacaa
aagaacatccattggaacagaaaaaaattgctcggctatacggaagaatgcaatgtcggt
agaggttttattaaggaggttgggttcagtcatgatggacgattgataagttcaccattt
ggtttcggcttacggatctttgcgtttgattctcaatgtaacgagttatgtgactgcatt
ccgacaagtccagtgaagttatacgaagtgacttgctctttggcacatgtaaactgtgtt
gttgcaaccaagttttcaccagtgcataacatgattgtatctggatgtctagatggtaaa
attgcatttcatcagccagtcctgtaa
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