Mercenaria mercenaria (northern quahog): 123546140
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Entry
123546140 CDS
T07835
Name
(RefSeq) F-box/WD repeat-containing protein 1A-like isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04120
Ubiquitin mediated proteolysis
mmer04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123546140
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
123546140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123546140
03036 Chromosome and associated proteins [BR:
mmer03036
]
123546140
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123546140
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
123546140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_C
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_SCAP
Beta-TrCP_D
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
F-box
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_DCAF12
WD40_like
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_WDR11_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
KNTC1_N
eIF2A
F-box_5
Beta-prop_LRRK2
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
123546140
NCBI-ProteinID:
XP_053407192
LinkDB
All DBs
Position
9:complement(36833588..36879211)
Genome browser
AA seq
518 aa
AA seq
DB search
MTSMESEMETCSSSVERLDIKKAETIAHIKPVGSVSEEQPSPQFLRERDGCVKLFDQWSE
NDQVLFLEHLLSRMCHYQHGQINAFLKPMLQRDFISALPAKGLDHIAENILSYLDAKSLC
SAELVCKEWYRVISDGMLWKKLMERMVRTDNLWRGLADRRGWGQYLFKPRPGEVPKDHKF
YRSLYPQIIQDIDRIETNWRTGRHTLQRIHCRSETSKGVYCLQYDDLRIVSGLRDNTIKI
WDRNTLECMQVLTGHTGSVLCLQYDNNIIISGSSDSTVRVWDVRTGEMLNTLIHHCEAVL
HLRFCDGIMVTCSKDRSIAVWDMQSPTEINLRRVLVGHRAAVNVVDFDDKYIVSASGDRT
IKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE
LVRCIRFDNRRIVSGAYDGKIKVWDLAAALDPRAPAGTLCIKTLVQEHSGRVFRLQFDEF
QIVSSSHDDTILLWDFLNVPVTDTPVRSPSRNAYKLVP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatggaaagtgagatggagacgtgttcttcatctgttgagcgattagatatc
aaaaaggcagagacaattgcccacataaaaccggtaggatcagtgtccgaagagcagcct
tcaccgcagtttctcagagaacgtgatggttgtgtaaaactgtttgatcaatggtcagaa
aatgaccaagtgttgtttcttgaacatctattgtcgcgcatgtgtcattaccaacatgga
caaatcaatgcatttctcaaacccatgcttcagagggattttatctcagcacttccagcc
aaaggattggatcacatagcagaaaacatcttatcatatttggatgccaaatcattatgt
tcagcggaattagtttgtaaagaatggtaccgagtgatctcagatggaatgctttggaaa
aagctcatggaacgcatggtgcgaacagataacctctggcgaggcctcgcagacagacga
ggctggggacagtatttgttcaaaccccgtccaggagaggtacccaaagatcacaaattc
taccgaagcctttatccacaaataatacaagatatagatagaatagaaacaaattggcgg
acaggtagacacacgttacaacgtattcactgtcgaagtgaaacaagtaaaggtgtatat
tgtctacagtatgatgatcttcgaatagtaagtgggctcagagataacacaataaagata
tgggatagaaacacattagaatgcatgcaagtattgacagggcacaccggttcagtactt
tgcctgcagtacgataataacatcatcatctcggggtcaagcgactcgactgtgcgtgtg
tgggacgtgcgcacgggagaaatgctaaacacactcatccaccattgtgaagctgtgctt
catcttagattctgtgatggtatcatggttacttgttcgaaggatcgttcaatagcagta
tgggacatgcaatctccaacagaaatcaacctacgtcgagttttggtcggccatagagca
gctgtaaacgttgtagattttgatgataaatatatcgtatcagcatcaggtgataggact
atcaaggtttggagtacatcaacgtgtgagtttgtacggacattgaatggtcacaaacgt
ggaatagcttgtttacaatatagagacagattagttgtgagtggaagctcagataatact
ataagactgtgggatattgaatgtggggcgtgtttacgagtgctagaaggtcatgaagaa
ttggttaggtgtattcgctttgataatagaagaatcgtgagtggggcctatgatggaaag
ataaaggtatgggacctagcagcagcgttggatcctagagctccagcaggcacattgtgt
atcaagacccttgtgcaggaacattcgggccgagtattccgcctccagtttgatgagttc
cagatcgttagcagttctcatgatgacacgatactgttgtgggatttcctaaacgttccc
gtcacagatacgcctgttcgctcaccgtctcgcaatgcatataagttagttccataa
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