Mercenaria mercenaria (northern quahog): 123546154
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Entry
123546154 CDS
T07835
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmer03036
]
123546154
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mmer00535
]
123546154
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123546154
Meiosis-specific proteins
Cohesin complex and associated proteins
123546154
Proteoglycans [BR:
mmer00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
123546154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
Mce4_CUP1
STIV_B116-like
Motif
Other DBs
NCBI-GeneID:
123546154
NCBI-ProteinID:
XP_053407291
LinkDB
All DBs
Position
9:complement(43982875..44428877)
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AA seq
1206 aa
AA seq
DB search
MYIKQVIIQGFRSYREQTVVEPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RQALLHEGTGPRVISAFVEVIFDNSDNRIPIDKYEVVLRRVIGSKKDQYFLDKKMVTKGD
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTKVYDERKEESKDILR
ETEGKREKINDLLKYIEERLATLENEKEELKEYQKWDKMRRSLEYTIHDHELRDTKKKLD
ELQEKRDNSGAQSQKFRDLQQAANDKVKSINKDLRDLKTRMQTVFDEKEQLQTENQELTK
QKAKLELLIKDIQDDLEGDAKAKKKLEEDLRKVNEKIAKTQTSLENITPQYESLRDREEE
CTQQLQAAEQRRKELYAKQGRGNQFTSREDRDTWIKNELKSLNKAIKDKEEQIRKLTEDT
GQEEKRKDMLETRITEINQKVEQHKEIIDTNNRSYNEMKAKKDELQNERSALWREENALQ
QTLVSLRDELGKKEQGLRSMTGKATLNGINSVQKVLQSFRDRNVNHDLISGYYGTLIEMF
ECDKTFFTCVEVTAGGRLFHHIVDSDQTGTAILKEMNRQHLPGEVTFMPLNRLDNRDTVY
PETNDAIPMISKLRYDDKYGPALKHVFSKTLICRSMEVATQIARTQNLDCITLDGDQVSR
RGALTGGHYDNRRSRLDLHKSKEEYAQKVADQERQYSEHKSKLEEIEGQINNLVSEMQKM
ETRNSKNRDNYEKMKADVRLMTEELKNLQKSQPGKGKSVVNLQSSLEAMKGTALSLKEEL
GTDLLSQLSVEDQEEMDKLNDQIKTLTQQNKDSLKERIKLEGEKNKLENLLQNNLMKNRE
RILGEMQEEAVMNRKERLTSSGEDLSKVDSRLAEIKSSMKELEDNLEKLNKEQKELQNNI
EYWRGQEKEMQDKLGEDSKELDKMTNKQTVLLKKKDECMKKIRELGSLPSDAFEKYQNLG
SKQLFKKLDQCNAELKKYSHVNKKALDQFVNFTEQKSKLIKRKEELDRAHTSIIDLMNAL
DHRKYEAIQLTFKQVSKYFSEIFKKLAPEGHAVLVMKKGDTDQGGDDEDGSQSQEVPLVE
QFTGVGIKVSFSGNRAEMRDMQQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDQALDA
QHRKAVADMIHELCQDAQFITTTFRPELLEHADKFYGVKFRNKVSHIDCVSYEEAQDFVE
DDTTHG
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaacaggttattattcaagggtttagaagctatagggaacagactgtggtt
gaacctttcagcagtaaacataatgtgatagttggaagaaatggatctgggaaaagtaat
tttttctatgcaatacagtttgtattgtcagatgaattcagtcatcttcgaccagagcag
agacaggcattgctacatgagggaacaggtccaagagtgatctcagcatttgttgaagtg
attttcgataactctgacaaccgtatacctattgacaagtatgaggttgtgctaagaaga
gtgatcggatcaaagaaagaccaatattttcttgacaagaaaatggttaccaaaggggat
gttatgaacttgttggaaagtgctggattctcaagaagtaatccatactacatagtcaaa
caaggaaagattaatcagatggccacagccccagattcacaaaggttgaagttattacgg
gaagtagctggaaccaaagtttatgatgaaagaaaagaagaaagtaaagatattctcaga
gaaacagagggtaaaagggagaagatcaacgatttgctcaagtatattgaggaaagattg
gccactttagaaaatgaaaaagaagaacttaaagaatatcaaaaatgggataaaatgagg
cgatcactggagtacacaattcatgatcatgaattaagagacacaaagaagaaattggat
gaattacaggaaaagagagacaacagtggtgctcagtctcaaaagttccgagatctccag
caagcagctaatgataaagtgaagtctatcaataaagatttaagagatttgaagacacgt
atgcagacagtgtttgatgagaaagagcagcttcaaacagagaaccaggaactcacaaaa
cagaaagctaaacttgagcttttgattaaagatattcaagatgatttagagggagatgcc
aaagctaagaaaaagttggaagaggatctgagaaaggtgaatgaaaagattgcaaagaca
cagacatcattggagaatataacaccacagtatgaatctctgagagacagggaagaggag
tgtacacaacagttgcaagctgcagaacagagaaggaaagaactgtatgctaaacaagga
cgtggaaatcaatttacatctagagaggaccgagatacctggatcaagaatgaactgaag
tctctcaacaaagcaattaaagataaagaggagcagatacggaagctgacagaagacact
ggtcaagaggagaagagaaaggacatgttagagactagaattacagaaatcaaccagaaa
gtggaacagcataaagaaattatagataccaacaacagaagctacaatgaaatgaaggca
aagaaagatgagctacaaaatgaaaggagtgcattgtggcgggaggagaatgcattgcag
cagactttagtctccttgagagatgaacttggcaaaaaggagcaaggacttagatcaatg
acaggaaaggcaacattgaatggtatcaacagtgtccaaaaagtgttacagtcatttcga
gaccgtaatgtaaatcatgatctcatcagtggttattatggaacactcattgaaatgttt
gaatgtgacaagacattctttacatgtgtagaggtcacagcagggggaaggttatttcac
cacattgttgacagtgatcagactggaacagcaatattgaaagagatgaatagacaacac
ttgccaggagaggtaaccttcatgcctctcaacagattggataacagggatacagtctac
ccagaaaccaatgatgcaataccaatgatcagcaagcttcgttatgatgataaatacggt
cctgctttaaaacacgtcttctctaaaacattgatctgtagaagtatggaagtggccaca
cagatagctagaacacagaaccttgattgtattacattagatggggatcaggtatcaagg
agaggggcactcactggaggccactatgataacagaaggtcaaggctggaccttcacaag
tcgaaagaagaatatgcacagaaggtagcagatcaagaaaggcagtacagtgagcacaag
agtaagcttgaagaaatagagggtcagatcaacaatcttgtgtctgagatgcagaagatg
gagacaagaaacagcaagaacagggataactatgagaaaatgaaggcagatgttcgactg
atgacagaggaactgaaaaacttacagaagagtcagccgggcaaagggaagagtgtagta
aacctacagagcagtttggaggctatgaaaggtacagccctgtcactgaaggaggagttg
gggacggatttactgtcacaactcagtgttgaggatcaggaagagatggacaaactcaat
gatcagattaaaactttaactcaacagaacaaagattctctgaaagaaagaattaagcta
gaaggtgaaaagaacaaactggagaacttactacagaacaatctgatgaagaaccgtgaa
cgaattcttggtgagatgcaggaagaagctgttatgaacaggaaggaaaggttgacatct
tcaggcgaggaccttagtaaggtggattcgagacttgcagaaatcaaaagctctatgaaa
gaactggaagacaatttagagaaactgaacaaggagcagaaagaactgcagaataatatc
gaatattggaggggtcaggagaaagagatgcaggataaacttggagaagattctaaagaa
ctagataaaatgacaaataagcaaactgtccttcttaaaaagaaagatgagtgtatgaag
aagataagagaattaggatctctgcctagtgatgcatttgaaaagtaccaaaatctcggc
tccaaacagttgttcaaaaagcttgatcagtgtaatgctgaactgaagaagtacagtcat
gtgaacaagaaagcccttgatcagtttgtcaactttacagaacagaaatcaaaactaatc
aagagaaaagaggaattagatagggctcacacatccatcattgatctgatgaatgctctc
gaccataggaagtatgaagctatccagcttacatttaaacaggtgtcaaagtacttcagt
gagatcttcaagaagttggccccagaaggtcatgctgttcttgtcatgaaaaaaggggac
acagatcaagggggagatgatgaagatggttcacagtctcaggaagtgccacttgtggaa
cagttcactggcgtcggaattaaggtttcattcagtgggaacagagcagagatgagagac
atgcagcagttatctggtggtcaaaagtctcttgtagctcttacactcatttttgccatc
cagaaatgtgaccctgctccattctacttgtttgatgaaatagaccaggctttagatgct
caacatagaaaagctgttgcagacatgatacatgagttgtgtcaggatgcccagtttatt
actacaacatttagacctgagctgcttgaacatgctgacaaattctatggtgttaaattt
aggaacaaggtgagtcacatagactgtgtgagttatgaggaagcacaggattttgtggaa
gatgacacaacacatggttag
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