Mercenaria mercenaria (northern quahog): 123546220 Help Entry 123546220         CDS       T07835                                  Name (RefSeq) protein RRP5 homolog   KO K14792   rRNA biogenesis protein RRP5 Organism mmer  Mercenaria mercenaria (northern quahog) Brite KEGG Orthology (KO) [BR:mmer00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:mmer03009]     123546220 Ribosome biogenesis [BR:mmer03009]  Eukaryotic type   90S particles    Other 90S particles     123546220 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  S1 S1_RRP5 OB_RRP5_4th Spt6_S1 HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C HAT_PRP39_N Suf TPR_14 TPR_19 HAT_PRP39_C TPR_16 TPR_15 S1_2 PPR ARM_TT21_5th TPR_CcmH_CycH ARM_TT21 ARM_TT21_N OB_RRP5 zf-C2H2_REST ARM_TT21_C RPN7 Motif Other DBs NCBI-GeneID:  123546220 NCBI-ProteinID:  XP_053407461 LinkDB All DBs Position 9:58231610..58302609 Genome browser AA seq 2006 aa AA seqDB search MEEENFPRGGVKKAEGKKNKKEPNLFQDISQGSDTKKKQKKQKKGGKANKDGGSESKKKH KMEGQVSGQMGQEQPQFLSKKFLYPGMLMLGYVKQIKNYALMMALPNGLSGTVPITNISQ AYTESLQRFSEAQDDNVENVSTLAELFKVGMVMPCKLTELDKNADSKSLTLTINPKDVNG DLSASSLRHGMCVYGNVSSQEDHGYIIDIGVKGVQVFLKNKHASRYIQLYNNDNPLGVGQ CLMCKIKMKGDRMSVLTGQNRVVNVTIDPLELKNVEGTEVSDVQFTSLVPGMKVHAKVEK VVKDDGIVVEFHKLRGLIHKSHLPKPPGSYSHAQQVTCCILYIHPLIKAVTLTLLPHLTD YVGVPTGLFGKVKVGQTIEEATVKKTEKKRGVFLDLQNNITGFAGMSNLSDDNVENVQQA FKKGSTHRCRVLGFYPMEALVIVTMKQSVLDEKYMRITDVKPGDILDCKVKKLEKKGISV EVHKGIMGMIPTMQMADVTLQHPEQKFKADDKIKCRVLFVNKKRSNVTLTHKKSLINSKY PVISNYHQIEVGQILEGYISAIKDFGCFVRFYSDVMGLTPRAMLSTEPIEYPEKVFFKGQ VVRCKVVHVNPPTKKLTLTFVLEGKTEFGQRTKEMPKDFKAGKKVKCKVLKKTETGVDVE LVSSHMKAFLPKTHLSDSMEMCDALWNMYKPGDVIEHAMYWHKSKMPLLTCKPCLLTSAE NEEDFVTTFDPLTPGMMLPGVVRNIMSYGIFVEFANGLFGLVPMQYAVDKRVPDIKVFYQ PGQTVVAKVVEVNKEKQRFLASLRMKDCYHGNTEIGIELTWNYLKERKRLLESLQKTKDK GLLTKVEFGSVHKVTITKVTKIGAICELENGIKAIVTKDHMPFKEEVSEGQTLDSVVLYV DLKQNCVEVSLDSKLVPPVKKRLEKDDLQAARVDQILQSKVVLIKDDFIVVKLSGHAKGQ LAYLPARRHWNDVLEKHQYTVGQENKVKIKRVEGDLILASLKVHEDKAVEDEDKLNHVPS HSLNIGDICDATVRKVYKDQIYINVNGTHGRVHVTEMFDHVENGSCPPLRLTKGQEVKVR VIGFRDNKSKKYLPISHPKLKKAMPDCTMKPSILSLDKLPDRYSCTENNYSVGDKVVAYV DCYSCNYVYTHVSPSVRGKVHLLNMSSSLQVLKEPGKHFRTGQVYNATVINIYTDTLVEL SLLDTPYEEVCLGKETQGVVCLSRKDAGLVLQLRDDIRGTVDLTDISDNYVDQPTEGFKQ GDILTVKVLELDKLSKQAVVTLRPDESVSKPVDERIQSISDLTRGQIVRGYIMRLSKEGI TVRLGVGVKFVLSQGSIVDGKYVKTQMMKKELKVGNVIRVKFLGYDKNNEPEWSMQDVER IPKQCLSDTPIRKNKKKRKRSVSNSSADSEVTKAKKTKLKNIETLNEIDENIQLEIEGLE KLDRDDLDERDSVTNSSVVSDPGMNLSDSIEERIDKDWKNLKISVSGVGDDDKQVNRSVV ETDDMLMTKEASEESDNESISDSEESSSDSSDNEEVERTSKLPGKNELEVISKKEDASDV SEKNNEDKLDTLEDSDTEANLRIKERLSKKLSESTKTVRQTDSSSEKSSQKQKTRGNKRR SQSELEGESPKKKQKESIKKEKEVPKETVNSDIEVKVVTKSDVQVSEKPVLEVGDGFSWD TDFKLPSLKQGEISSDDSDDEGTEKPVKKSKEQIRQEKKEEEKRIYQAEMQRLEGEVQPE TADDFDRLVLQSPNSSLVWLNYMAFHLGTTEIDKARAVAERALKTISFREEQEKLNVWVA YLNLENMYGTAETVRKVLTRAVQQNDQISIYLQMINIYVKSGKTEDGEQLFNTLVKKHSG NKDVWIKFGEFYFQQGRVESARKLLQRCMKSLDISQHVDTIVKFAQMEFKHGEPERGKTM FENILSTYPKRTDLWSVYIDLVTKLGELDTARSLFNRVIQLLSAKKVKFFFRKYLQFENK HGSEDQVAEVKRKALHYVESQGFVDQ NT seq 6021 nt NT seq  +upstreamnt  +downstreamnt atggaagaagagaattttccaagaggaggtgtaaagaaggcagaaggaaagaagaataaa aaagaaccgaatttgtttcaggacatttctcaggggtcagatacaaagaaaaaacagaag aagcagaaaaaaggaggaaaagcaaataaagatggtgggtcagagagtaagaagaaacat aaaatggaaggacaagtttccggtcagatggggcaagagcagccacagtttctctccaaa aagtttctatacccaggaatgctgatgcttggctatgtgaaacagataaagaactatgct ctgatgatggccctgcctaatggcttatcagggacagtacctataactaacatatcacag gcttacacagaaagtctacagaggttttcggaagctcaggatgataatgttgagaatgta agcacattggcagagttattcaaggttggtatggtgatgccatgtaagctgacagagctt gacaaaaatgctgacagtaaatctctgacactgactataaatccgaaagatgtgaatggt gatctgtcagcttccagtctccgacatggaatgtgtgtttatggaaacgtgtcgagtcaa gaagaccatggttatattatagatattggtgttaaaggtgtacaggtgttcctgaagaac aaacatgcctcgagatacatacagctgtacaataatgataatccacttggtgttggtcag tgtttgatgtgcaagataaagatgaaaggtgacagaatgtctgttttgactggacagaat cgagtcgtaaatgttaccatagacccactggaactgaagaatgtagagggcacagaagtc agcgatgttcaatttacgtcacttgtgccggggatgaaagttcatgccaaagtggagaag gtagtgaaagatgatggtatagtggtagagtttcacaagctgagggggttgatacataag tcacatcttcctaaaccgccaggctcttacagccatgctcaacaggttacctgctgtatc ttgtacatacatccactgattaaagcagtcaccttgacattgttaccacacctaactgac tatgttggtgtcccaactggtctgtttggaaaggtcaaggtcggacaaactattgaagaa gccactgtgaagaaaactgaaaagaagcgtggagtttttctagatctgcaaaacaacatt acaggatttgctgggatgagtaatttaagtgatgataatgtagagaacgtacaacaagcc ttcaagaaaggttcaactcacagatgtcgggtgttaggattttacccaatggaggcactt gtaattgttacaatgaaacagagtgtattagacgagaagtatatgaggataacagatgta aagccaggcgatatattagattgtaaagtgaagaagttggagaagaaagggatcagtgtt gaagtacacaagggaatcatgggaatgatacccacaatgcaaatggcagacgtaacactg caacatccagaacagaaattcaaagcagatgataaaatcaaatgtagggtattgtttgta aacaagaagcgttcaaacgtgaccttgacccacaagaaatctctgataaatagtaaatac ccggtgatctcgaactaccaccagatagaggttggacagatactcgagggttatatctcg gctatcaaagactttggatgttttgtccgattctacagtgatgttatgggtttgacccca agggccatgttaagcacagagcctattgagtacccagagaaagttttctttaagggccag gtagtcagatgtaaagttgtacatgttaaccccccaaccaaaaaactcacgttgactttt gtgcttgaagggaagacagagtttggacagagaacaaaagaaatgccaaaggactttaaa gctggcaagaaagtgaaatgtaaagttttgaaaaagactgaaacaggtgtcgatgttgag cttgtctcctcccacatgaaggcgttccttcccaagacacacctctcagactccatggag atgtgtgatgcgttatggaatatgtacaaacctggtgatgtcatagaacatgcgatgtat tggcacaaatccaaaatgcctttattgacatgtaaaccttgccttctgacatcagctgag aatgaggaggactttgttacaacatttgatcctctcacaccaggtatgatgttgcccgga gttgtgaggaacataatgtcctacggtatatttgtggagtttgcaaatggattgtttggg cttgttcctatgcagtatgctgtggataaaagggtaccagacattaaggtattttaccag ccgggccagactgttgttgctaaggttgttgaggtcaacaaggagaaacaacggttcctg gcttcactgagaatgaaagattgttaccatggtaacacagaaattggaatagaacttaca tggaactacctgaaagaacggaaaaggttgttagaatccttgcagaaaactaaagataag ggactacttaccaaggtggaatttggtagtgtgcacaaggttacaatcacaaaggtaaca aaaattggagctatatgtgaactggaaaatggaatcaaggccatagttacaaaagatcat atgccatttaaagaggaagtaagtgaaggtcagacattagacagtgttgtactttatgtt gacttgaaacagaattgtgtagaagtttccctagactccaagcttgtgccaccagttaaa aagagattagaaaaagatgatttacaagcggccagagttgatcagatcttgcagtctaaa gttgtccttatcaaagatgattttatagttgtcaagttaagcggccatgccaaaggtcag ctggcttatctacctgctagaaggcattggaatgatgtcttagagaaacaccagtatact gttggacaagaaaacaaagtcaaaattaagagggttgaaggagacctgatcttggcatct ctcaaagttcatgaggacaaggcagtggaagatgaagataaactgaatcatgtaccttca catagtctgaatataggtgacatctgtgatgccactgtgcgaaaggtatacaaagaccag atttacatcaatgtcaatgggacgcatggaagagtccatgtcacagagatgtttgatcat gtcgaaaatggtagctgtccaccgttaaggttgaccaagggtcaggaagtgaaggtccgt gttattgggtttagagataacaaatctaaaaagtacctcccaatttctcatccaaagttg aagaaggctatgccagattgtacaatgaaacctagcattttgtcattggataaacttcca gacaggtattcctgtaccgagaataactacagtgttggcgacaaagttgttgcctatgtt gattgttattcttgcaactatgtatatacccacgtgtctcctagtgttagaggaaaggtt catcttctcaatatgtcctcaagcttacaggtgttgaaggaaccagggaaacatttcaga actggccaggtttacaacgcaactgtcataaacatatacacagacacactggtggaactg tctctccttgatacaccgtatgaggaggtatgtcttggcaaggagacacaaggtgttgtt tgtttatcaaggaaagatgcgggtctcgtcctgcagctcagggatgatatccgtggaaca gtggatcttacagacatttctgataactatgtagaccaaccaactgaaggtttcaaacaa ggggatatactgactgttaaagttcttgaacttgacaaactgtcgaaacaagcagttgta acattaagaccagatgagtccgtcagtaaaccagtagatgagaggatacaaagtatttct gacttgacacgtggacagattgttagagggtatataatgcgtttgtcaaaagaaggaata acagttagacttggcgttggtgtaaagtttgtgttatctcagggcagtattgtggatggg aagtatgtaaagacacaaatgatgaagaaagagctcaaagtcggcaatgttatcagggtg aaatttctagggtatgacaaaaataatgaacctgaatggtcaatgcaagatgttgaacgt attcctaaacagtgtctctctgatacaccaattcggaagaataaaaagaaacgtaaaaga tccgtttccaactcatcagctgactctgaggtcactaaagcgaagaagactaagttgaaa aacatagaaacattgaacgaaattgacgaaaacattcaacttgaaattgaaggtttggaa aaattggacagagatgatttagatgaacgagatagtgttactaatagttcagtagtcagt gatcctggaatgaatttgagtgatagtattgaagaaagaatagataaagattggaaaaat ttgaaaatatctgtgtcaggagttggtgacgatgacaaacaggttaatagaagtgtggtg gaaacagatgatatgttaatgactaaggaagcttcagaagaaagtgataatgaaagtata tcagattcagaagaaagtagttctgacagtagtgataatgaagaagttgaaagaactagt aaacttcctggtaaaaatgaattggaagttatttcaaaaaaggaagatgcaagtgatgtg agtgagaaaaataatgaagacaagttagatacattagaagattcagacactgaggcaaac ctaaggattaaagagaggttaagtaaaaaattgtctgaaagtactaaaactgtgagacaa acagactctagttcagaaaagagtagtcaaaagcagaaaacaagaggaaataagagaaga agtcaatcagaattggaaggagagtcacctaaaaagaaacagaaggaaagtattaagaaa gagaaagaagtacccaaagagactgttaacagtgacatagaagtgaaggtggtgacaaag tcagatgtacaggtgtcagaaaagccagtattagaggttggggatggatttagctgggat acagatttcaagttaccatcccttaaacaaggggagataagttctgatgactcagacgat gaaggaacagagaaaccggtaaagaaatcaaaggaacaaatacgacaagaaaagaaggag gaagaaaaacgaatatatcaggctgagatgcagcgtttggaaggagaagtacaaccagaa acagcagacgactttgatagactggttctacaatcgccgaatagttctctagtatggtta aactacatggccttccatttagggactacagaaattgataaagcaagggctgtagctgag agggcattgaaaactatctcatttagagaagagcaggagaagttgaatgtttgggttgcc tacttgaacctagagaatatgtatggtacagcagagactgtgagaaaagtattgacacgt gctgtacaacagaatgatcagatctctatatatcttcagatgataaatatatatgtcaaa tctggcaaaactgaggatggggagcagctatttaacaccctggtgaagaaacacagtggt aataaagacgtatggatcaagtttggagagttctacttccaacagggtcgtgttgaatct gcacgtaaacttctgcaacgttgtatgaaaagtctagatatatcacaacatgtggacact atagtgaaatttgcccagatggaattcaagcacggggaaccagagagagggaagacaatg tttgaaaacatactgagtacctacccaaaacgtacagatctgtggtcagtttatattgat ctggtcacaaaacttggagaactggacactgctagatctcttttcaacagagtcatacag ctgttgtctgccaaaaaagtgaagtttttctttaggaaataccttcaatttgaaaataaa catggttccgaggatcaggtggcggaagtgaagaggaaagccttgcattatgttgaatca cagggatttgtagaccagtga

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