Mercenaria mercenaria (northern quahog): 123546551
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Entry
123546551 CDS
T07835
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123546551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123546551
03012 Translation factors [BR:
mmer03012
]
123546551
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123546551
Translation factors [BR:
mmer03012
]
Eukaryotic type
Release factors
123546551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
123546551
NCBI-ProteinID:
XP_045188856
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Position
9:15557070..15580671
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AA seq
441 aa
AA seq
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MASNGVDGETNADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQIPRVSKMLADEF
GTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVIYCGTIVTDEGKEKKVNIDFEP
FRPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLSGNTREVLHKFTVDL
PKKHGRGGQSALRFARLRMEKRHNYVRKVAEVAVQMFISNDKVNVSGLVLAGSADFKTEL
SQSDMFDLRLQQKVIKIVDVSYGGENGFNQAIELSAESLSNVKFIQEKKLIGRYFDEISQ
DTGRFCFGVDDTLKALEMGAVDILIVWENLDITRYVLKNHQTDVENILFLTPEQEKDKTH
FLDKDTGVELELQDQMPLLEWFANNYKNFGATLEIVTDRSQEGAQFVKGFGGIGGILRYQ
VDFQILDPGLDGFDDFNLDDY
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaacggcgtagatggcgagactaacgctgatcgaaatgttgaaatatggaaa
ataaagaagcttataaaaagcttggaagcagctcgtggaaatggaacaagcatgatttca
cttatcattccaccaaaggaccagattcccagggtgtccaaaatgttggctgatgaattt
ggaacagcatcaaatattaaaagtagagtgaacagactatcagtgctgggagcaattaca
tctgtacaacagagattaaaattgtacaacaaagttccaccaaatggtcttgttatatat
tgtggaaccattgtgacagatgagggcaaggaaaagaaagtgaacatagactttgaacca
tttagacctatcaatacatccctatatctttgtgataacaaatttcatacagaggcatta
acagcacttctagctgacgataacaaatttggttttattgtgatggatggtaatggggca
ttgtttggaactctgtcaggaaacactcgagaagttcttcataaattcacagtagacttg
ccaaagaaacacggtagaggaggtcaatcagcgcttcgttttgctaggttaagaatggaa
aaacgacacaactatgtacgcaaagtagcggaagtcgcagtacagatgttcatctcaaac
gataaagtcaatgtgtctggtcttgtattagccgggtcagcagattttaaaacagaactc
agtcagtcagacatgtttgatctgagattgcaacaaaaagtgataaaaattgttgatgtt
tcatatggtggtgaaaacgggtttaaccaagcaattgaacttagtgctgaatcattatca
aatgttaaattcatccaggagaagaaattgataggtcgatattttgatgaaatctcacaa
gacactgggcgattctgttttggtgttgatgacactttgaaagccctggagatgggggca
gtagatattctcattgtatgggaaaacctagatataaccagatatgtgctcaaaaatcat
caaacagatgttgaaaacatccttttcctcacaccagagcaagaaaaagacaaaacccac
tttttagataaagatactggtgtggaattagagcttcaagatcagatgcctttattagaa
tggtttgctaacaattacaagaattttggagcaaccctagaaatagtcactgacagatca
caggagggtgcacaatttgttaaaggatttggtggaatcggaggtatattacgatatcaa
gtggacttccagatactggacccaggattggacggctttgatgatttcaacctggatgat
tattaa
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