KEGG   Mercenaria mercenaria (northern quahog): 123546617
Entry
123546617         CDS       T07835                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
mmer  Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmer03036]
    123546617
   03400 DNA repair and recombination proteins [BR:mmer03400]
    123546617
Chromosome and associated proteins [BR:mmer03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    123546617
DNA repair and recombination proteins [BR:mmer03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     123546617
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_ECM29 HEAT_2 HEAT
Other DBs
NCBI-GeneID: 123546617
NCBI-ProteinID: XP_045188984
LinkDB
Position
9:18827875..18893433
AA seq 1018 aa
MAAPRETCIRNFIENSDDSVPKDLSRELAGGNVTLTDIIEDLGDYLTNKEHAIRARATRL
IADILHELPVNFVNHNQVSLLSTFLCEKLRDHHSLQPQALYGLEALSMSGEISGEIIETI
CRTIFKEVHTQSLAQAGRKSVYNIILQFLTQHLQDVQKLGTDFVYGYMQAMDSEQDPRNL
ILAFTCAQIVIQNLPLGVFVEEMFEVVSCYFPIDFTPPANDPSGITKEDLILGLRRCLAA
SPKFAEYCLPLLMEKLTSDLKSAKIDALQTLAMCAETYGADKLYEFQSSFFNCIKKEVFL
SGDATVEDAALSALQALVKAVSAGITQSDRKKSLDGFMDEILAECKNHLLQPELMLMLST
GRLLQAAASGSDTACAHIVRTSIPLLIESYNKQSQATPRHNVILVLNGFLGCTANFSFGD
RNPILALYKDSVLLIYNQALDMEVCSIQLLAIRGVHTLVSLPRGCLLDPERSFIATKLIN
KAIETNLEEQVRHECNSTLMFLLATYSDVVQKDVFPILFAKLQKEVMETSDGRSVDRTVI
LDVISEITCGAENIKLVTDVLYEMLMNADYLDLYQSLSKCLSTISENSIKDPDAVRSLSH
GVEHVHTLVVTRCRCPRWYKALSNESLLKNLSAFLRNIIAHLDPVQALTLQGLYTNTFLT
GGKSSVCQCCSVQDREMFKSHMEEFSPLKASCDSVFVCLLTAVICAGHTKFQKDIPGIEE
IEDRLGDLVCEPLDSEAGVHVCKCLAGLLNKQEQNESLDMRVTSLYDKLSTLVTVSGDKG
QGPTVTALSWITKALVLRGHKLAQKFTDLLIQLLGNCTHGSEAAQGLAVIMRDFEDVMSK
SMHANIRLMYRQRFFIENLSGLLDGYQSAQQETKTHYLSAVSYLIRDLSKTVLLPEISKI
YPLLIQSLHCNDLDLQLVTMETLSDLISSAPDVIEKQIDSLIPQLLKMSTFKPSMKVRIS
ALKCLSSLSSLPLTILLPYRKKVVRALVPALDDKKRRVRSEAVTARQNWILLDMDKKE
NT seq 3057 nt   +upstreamnt  +downstreamnt
atggctgcgcccagagaaacttgcattagaaattttatcgaaaattctgacgattctgtt
cctaaagatttgtcaagagaattggctggaggaaatgtgacattaacagatattatagaa
gatttaggagattatttgacgaataaagaacatgcaattagagcacgtgctacacgactg
attgcagacatactgcacgaacttcctgtcaactttgtcaatcataaccaagtcagcctg
ctgtcaacatttctgtgtgagaaattacgagatcaccactctctgcagccacaagccctt
tatggtctggaggccttgagcatgtcaggagagatttctggtgaaataatagaaactatc
tgtcgcacaatatttaaggaggttcatacccagtcactggcccaggcaggaagaaaatct
gtctacaatataatcttacaatttcttacacaacatctgcaagatgtacagaagctggga
acagattttgtgtatggttacatgcaggccatggactcggaacaagaccccagaaatctc
atcctggcatttacctgtgctcaaattgtgatacagaatctcccactgggggtgtttgtt
gaggaaatgtttgaagtggtgtcatgctattttcctatagactttacacctccggccaat
gatcccagtggtataacaaaggaggatttgattcttggattacgtagatgtttagctgca
tcaccaaaatttgcagagtattgtctccctttgttgatggagaaactgacctcagatctg
aagagtgcaaaaatagatgccctgcaaacattggctatgtgtgcagagacgtatggtgca
gacaagttgtacgaattccaaagttcattcttcaactgtataaagaaagaggtatttcta
tctggagatgctacagtagaagatgcagcgcttagtgccctacaagctcttgtgaaggca
gtatcagctggaattacacagagtgaccggaagaaaagtctggatggatttatggatgaa
attcttgcagaatgtaagaatcaccttctgcagccagaactgatgttgatgttatctaca
ggacgtctgctgcaggccgcagcctctggatcagatacagcttgtgctcatatagttaga
acatctataccattgttgatagaatcttataataaacagagtcaggctacaccaagacac
aatgtgatactggtactcaatggttttctaggttgtacagccaacttcagttttggtgac
agaaatcctatccttgccctgtacaaagattctgttttactaatctacaaccaggcccta
gatatggaggtgtgctccatacagttgttagctatcagaggggttcacacactagtctcc
ttgccaaggggttgtctgctagacccagagagatccttcatagcaaccaagctgatcaac
aaagccatagaaacaaatcttgaagaacaagttaggcatgaatgtaattctacattaatg
tttttgctggcaacatattctgatgtggtgcagaaagacgtgtttccgatactgtttgcc
aaattacaaaaggaggttatggaaacaagtgatggtagatctgtagatagaacagtgatc
ttggatgttatttctgagattacctgtggtgcagagaatatcaagctggtgacagatgtc
ctgtatgaaatgttaatgaatgcagattacttggacctgtaccagtcattgtcaaaatgt
ctgtcaactatatcagagaatagtatcaaagatccagatgctgtaagaagcttatcacat
ggtgtggaacacgtgcatacactggtggtcactagatgtcgctgtccacggtggtacaag
gcattatctaatgaatctttgttgaagaacctttcagcatttctacgtaacattatagca
catttagatcctgttcaagcacttaccttacaaggactttacactaacacgttcctgact
ggaggtaaatcaagtgtatgccagtgttgttctgtgcaggatagggaaatgttcaaatct
cacatggaggaattttcacctctaaaagccagctgtgatagtgtgtttgtatgtcttctt
actgcagttatatgtgctggacatacaaagtttcagaaagatataccgggtatagaggag
atagaagacaggctaggagatcttgtctgtgagccactagactccgaggcaggtgtacat
gtttgtaaatgtctggctggtctacttaacaaacaagaacaaaatgaatctctagacatg
agagttacatccctttatgataaactgtcaaccttggtgaccgtgagtggagacaaaggt
caaggtcctactgtaacagcgttgtcttggattaccaaagctctggtgttgagaggtcac
aaactagcacaaaagtttactgacttgctgatacagttactaggtaactgtacacatggt
agtgaagctgcgcaggggcttgctgtgataatgagagactttgaggatgtgatgtcaaag
tccatgcatgccaacatacggttgatgtataggcaaagattcttcattgagaacctgtct
ggtttattggacggataccagtcagctcagcaagagacaaagacacattatctatcagct
gtgtcttacctgatcagagatttgagcaaaacagttttacttccagagatctcaaagata
tatccgttgttgatccagtcactgcactgtaatgaccttgaccttcagttagttaccatg
gaaaccctgagtgacctcatttctagtgcacctgatgtgatagagaaacagatagactct
ctgataccacagctgctgaaaatgtctacatttaaaccctcaatgaaagtacgaatctca
gctttgaaatgtttatcatctttgagtagtttaccactgacaatactgttgccatatcgt
aagaaggttgtccgagcacttgtaccagctctcgatgataagaaaagacgagtgagatcc
gaagctgtcactgcaagacaaaattggattttattagatatggacaagaaagagtga

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