Mercenaria mercenaria (northern quahog): 123547151
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Entry
123547151 CDS
T07835
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmer04147
]
123547151
04090 CD molecules [BR:
mmer04090
]
123547151
Exosome [BR:
mmer04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
123547151
CD molecules [BR:
mmer04090
]
Proteins
123547151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
FANCA_interact
dCache_2
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
123547151
NCBI-ProteinID:
XP_045189956
LinkDB
All DBs
Position
9:complement(55545987..55587950)
Genome browser
AA seq
1165 aa
AA seq
DB search
MSYLLTSCQGHFTTLLIIIFALVSNIYGADPIYSPQTLTDTSGNNADNSSTITWASLPAG
KSFTAGSPSRVSEGLKAYYDFVHSFINSVFMKGFPDDLIEKGLEGDFDSIVSSYQSYISY
FIGFGICVAVGVLFLLIFPIVACCFCCCRLCGNCGGKRQQLQKNADSVCRKYTFAGILFV
STVFVMVGTICIYINNENMTTTLNNIPDTAEDNLNDVRTFVNNTVNEATHIVTENFQFVQ
TALFRDLDNIAFLVGLTLKTDIEDNTNITNTLTSAYSLADSLDNADAALSAIESNKTAME
TAITDLQTALTNVTNTLNTVFANCGASCPAGGRPDYNGTSPDIDTSAFPDLSDARTSMDD
AKGTNLTEEIVNGEAEVDDIPDRVARDSNTTREDLKTTISDLSDDLEDIVDQISDVNNRI
SGENATIDLDKLILDIKDYKEMLETYDKYRWYGGVGLASICLLVIVFAIFGLLFGIFGTS
TSTPPDQRGCISNCGGIMLMVSAALIFIFSALLMLLTFLTFIPGAPIHKVFCEPVTDLEE
LERYLTIYNDQQVGEGKYFFADIVLGNDTIPLTVTDALKNCKDGQGAFTAFKLDNRFDLT
DMLNYSKTLDVQAEVDAINVNLSSVKIYSSSLQTQLSDLKDAVNISFTDFYTELDSNITT
VNLSSLADDLDAYADTIPGSPTQKADIKAEANKLRTIEAEEYAYVESNVTALNTSVAEMD
AVVSNIPTLVDNLDYGLQTADNYIQNNGSDVVRSILNTYVNRLLGIIDSYVAFTDDAVKN
QLGSCEPVWNIYNSLLVYTFCYNFMDCFNGFWFSLGWVIFFFMPSVIFSVKLAKYFRQMD
RADESLLDSDTPPPPYSANGGKNPNAGLGQDPVSQDMPSKAKFWMRNNRVSHRDNVDDCA
SSPIPPFPSKESRDCLEQVPSNLYEARSFNDMGSSSHPVTFSPSTSNCVNQASSHPGSSC
EEEVCNDSKSLVNDYAKLSAPEEASTHIDADNDIINITVGETSNLSDFEQHEAKPKSSDM
TSSEDLEAKTPSSLDGDHKEPPTTDSKNDISPVTENEIDSDPIPPIQNNKESHILVQPKA
DSDSQNISVEQQVHSVPEETEKQTSSIQELDKEDTREQGFPEETIDKAVLSPSPQALLDN
GETLQGSGETLSATCREESTLTPVG
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacttgctaacatcctgtcaaggacattttacaacgttgctcatcattatcttt
gcactggtttccaacatttatggtgctgatcccatctactcgccgcaaacgctcacagac
acgagtggaaacaatgcggacaactcatcgacgatcacgtgggctagtctgccagctggg
aagtcgtttacagccggcagtccgtcgagagtcagtgaaggcttaaaagcctactatgac
tttgttcacagcttcataaattcagtgtttatgaaaggatttccagatgatttaattgaa
aagggtctggaaggtgactttgattcaatcgtcagtagttaccagtcctatatttcatat
ttcatcggctttggaatatgcgtcgctgtcggagtgctgtttttgctcattttccctatt
gtcgcctgctgtttctgctgctgtcgtttgtgtgggaattgtggcgggaaaaggcaacag
ttgcagaaaaatgctgacagtgtctgcagaaaatacacattcgccggcattcttttcgtg
tcaaccgtatttgtaatggtcggaacgatatgtatctacattaataatgaaaacatgacg
accacgctaaacaatataccagatacagcagaagataatctcaatgacgtcagaacattt
gtcaacaataccgtcaatgaagcaacacatatagtgacagaaaatttccagtttgtacag
acagctttgtttagggaccttgataatattgcgttcctggttggcctgacactgaagacc
gatatagaggacaatacaaatatcaccaacactctgacgtccgcttattctttggcagac
agtttagacaatgcagatgcagcgctgtcagcgattgagtcgaacaaaacagctatggag
acagcgatcactgaccttcaaactgcactgacgaacgtcactaacacccttaatactgta
tttgcaaattgtggtgcaagctgtcctgccggaggaagaccggattacaacggaacttca
ccggacatagacacaagtgcttttccagatctgagcgacgcccgaacaagtatggacgac
gcaaaaggaactaatcttacagaggagattgttaatggagaagcagaagttgatgatata
ccagacagagtagcccgtgattctaacacgacacgagaagatttaaagacgactatatca
gatctaagtgacgatttggaggatattgttgatcaaatctcggatgttaataatcggata
agcggggagaatgctactattgaccttgataaactgatacttgatataaaggactacaaa
gagatgttagagacatatgacaaatacaggtggtatggcggagtaggtctggcttctata
tgcttgctggttattgtattcgccatatttggactgcttttcggaatctttggaacgagt
acaagcacaccaccagatcagcgagggtgtatctcaaactgtggtggaataatgcttatg
gtctctgcggctttgatcttcatattttcggccttattgatgttgctgacattcttaacc
tttatacctggagctccaatccacaaagtcttttgtgaaccagtgacagacctagaggag
ctggaaaggtatctgacaatttacaacgaccagcaagttggagaaggcaaatatttcttt
gcagatattgtacttggtaacgacacaatacctctgacagtcacagacgcattaaagaat
tgcaaggacggacaaggtgcattcactgcattcaaactagacaacagattcgacttgaca
gatatgctaaattactccaagacactagatgtacaggctgaagtcgatgccatcaacgtc
aacctttcatctgtaaaaatttactcatccagtcttcagacacaattaagtgacctaaaa
gacgcagtgaatatcagttttacggacttctatactgagctggattcaaatataacaaca
gtaaatttgagcagcctagctgatgatttggatgcttatgctgatacgatacccggttcc
ccaacacaaaaagctgatatcaaagctgaagcaaataaattgcgaacaattgaggcggaa
gagtatgcctatgttgaaagtaatgtgacggccttgaatacatctgtagctgaaatggac
gctgttgtttctaatattccgactttggtggacaatttagactatggacttcaaactgcg
gataattatattcaaaataacggaagtgacgtagtgagatcgattttgaatacctacgtc
aatcgtctgcttggtataatagattcgtatgtagcattcacagatgatgcggtcaagaac
cagttgggatcatgtgagcctgtttggaacatttacaattccctgcttgtgtacacattt
tgctataattttatggattgcttcaatggattctggttttcactaggatgggtcatcttc
ttcttcatgccgtctgttatcttttctgtgaagctagccaaatatttcagacaaatggac
cgggcagatgagagtctgttagactcggacacacctccaccaccatattcagcaaacggt
ggaaagaaccctaatgcagggttaggacaagatcctgtgtcacaagatatgccgtcaaag
gcaaagttttggatgaggaacaacagggtttctcacagagacaacgttgatgattgcgca
tcatcacccattccacctttcccatcaaaagaatcacgtgactgtcttgagcaggtaccg
tcaaatttatatgaagctaggtcttttaatgacatggggagtagttcccatccagtaaca
tttagcccgagcacatctaactgcgtaaatcaagcttcctctcatccaggcagttcttgt
gaggaagaagtgtgtaatgacagtaaatcgctggtcaatgattatgcaaaactcagtgca
ccagaagaggcgagtactcatattgatgcagataatgatataatcaacataacagttggt
gaaacatcaaatttatccgactttgaacaacacgaagcaaagcccaagtcaagtgatatg
acatcttcggaagatctggaagcaaagaccccttcgagtttagatggtgatcacaaagaa
cctccgacgacagactccaagaatgacatctctcctgttactgagaatgaaatagatagt
gaccctatacccccgatacaaaataataaagaaagtcacatattagtacaaccaaaagct
gacagcgattcccaaaacatctctgttgaacagcaagttcactctgttccagaggaaaca
gaaaaacaaacttcttctatccaagaacttgataaagaagatacacgcgaacagggtttt
ccagaagaaaccatcgataaagccgttctctctcctagtcctcaagctttattggacaat
ggcgaaaccttgcaaggatcaggagaaactttatctgcaacatgtagagaagagtcaaca
ctgactccagtagggtaa
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