Mercenaria mercenaria (northern quahog): 123547154
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Entry
123547154 CDS
T07835
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmer04147
]
123547154
04090 CD molecules [BR:
mmer04090
]
123547154
Exosome [BR:
mmer04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
123547154
CD molecules [BR:
mmer04090
]
Proteins
123547154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
dCache_2
YtxH
FANCA_interact
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
123547154
NCBI-ProteinID:
XP_053407418
LinkDB
All DBs
Position
9:complement(55598290..55646724)
Genome browser
AA seq
1058 aa
AA seq
DB search
MVTLIQSSVVTSPIFHISLALEYASLSEFLLIFPIVACCFCCCRLCGNCGGKRQQLQKNT
DSVCRKYTFSGILFVSTVFVMVGTICIFINNENMTTTLNNIPDTAEDNLNDVRTFVNNTV
NEATHIVTENFQFVQAALYRDLDNIAFLVGLTLKTDIEDKTNITNTLTSAYSLSDSLDNA
DAALSAIESNKTAMETAVTDLQTALTDVTNTLDAVFTTCGANCPAVGRPDYNGSSPDIDT
SAFPDLSDARTSMDDAKGTNLTEEIINGEAEVDDIPDRVVRDSNTTREDLKTTISDLSDD
LEDIVDQISDVNNRISGENATIDLDKLILDIKDYKEMLETYDKYRWYGGVGLASICLLVI
VFDTIGLLFGIFGTSTSTPPDQRGCISNCGGIMLMVSAALIFIFSAFLMLLTFLTFIPGA
PIHKVFCEPVTDLEELERYLTIYNDQQVGEGKYFFADIVLGNDTIPLTVTDALKNCKDGQ
GAFTAFKLDNRFDLADMLNYSKTLDVQAEVDAINVNLSSVKIYSSSLQTQLSDLKDAVNI
SFTDFYTELDSNITIVNLSSLADDLDAYADLIGEATAKAGIKAEANKLRAIEAEEYAYVE
SNVTALNTSVAEMDAVVSNIPTMVDNLDYGLQTADDYIQNNGSDVLRSILNTYANRLLGI
IDSYVAFTDDAVKNQMGSCEPVWNIYNSLLVYTFCYNLMDCFNGFWFSLGWVIFFFMPSV
IFSVKLAKYFRQMDRADDGLLDSDTPPPPSANGEKNPNAGLGQEPVSQDMPSKAKFWMRN
NKVSHKDNVDDCASSPIPPFPSKESRDYLEQVPSNLYEDRSFNDMGSSSHPVTFSPSTSN
CVNPASSHPGSSCEEEVCNDNKSLVNDYAKLSAPEEASTHIDADNDIINITVGETSNLSD
FEQHEAKPKSSDMTSSEDLEAKTPSSLDGDHKEPPTTDSKNDISPVTENEIGSDPIPPIQ
NNKESHILVQPKADSDSQNISVEQQVHSVPEETEKQTSSIQELDKEDTREQGFPEETIDK
AVLSPSPQALLDNGETLQGSGEGLSATCREESTLTPVE
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggtgactttgattcaatcgtcagtagttaccagtcctatatttcatatttcattggct
ttggaatatgcgtcgctgtcggagtttttgcttattttccctattgtcgcctgctgtttc
tgctgctgtcgtttgtgcgggaattgtggcgggaaaaggcaacagttgcagaaaaatact
gacagtgtctgcagaaaatacacattctccggcattcttttcgtatcaaccgtatttgta
atggtcggaacgatatgtatcttcattaataatgaaaacatgacgaccacgcttaacaat
ataccagatacagcagaagataatctcaatgacgtcagaacatttgtcaacaataccgtc
aatgaagcaacacatatagtgacagaaaatttccagtttgtacaggcagctttgtatagg
gaccttgataatattgcgttcctggttggcctgacactgaagaccgatatagaggacaaa
acaaatatcaccaacactctgacgtccgcttattctttgtcagacagtttagacaatgca
gatgcagcgctgtcagcgattgagtcgaacaaaacagctatggagacagcggtcaccgac
cttcagactgcactgacggacgtcactaacacccttgatgctgtatttacaacttgtggt
gcaaactgtcctgccgtaggaagaccggattacaatggatcttcaccggacatagacaca
agtgcatttccagatttgagcgacgcccgaacaagtatggacgacgcaaaaggaactaat
ctaacagaggagattattaatggagaagcagaagttgatgatataccagacagagtagtc
cgtgattctaacacgacacgagaagacttaaagacgactatatcagatctaagtgacgat
ttggaggatattgttgatcaaatctcggatgttaataatcggataagcggggagaatgct
actattgaccttgataagctgatacttgatataaaggactacaaagagatgttagagaca
tatgacaaatacagatggtatggaggagtaggtctggcttctatatgcttgctggttatt
gtattcgacacaattggactgcttttcggaatctttggaacgagtacaagcacaccacca
gatcagcgagggtgtatttcaaactgcggtggaataatgcttatggtctctgcggctttg
atcttcatattttcggcctttttgatgttgctgacattcttgacctttatacctggagct
ccaatccacaaagtcttttgtgaaccagtgacagacctagaggaattggaaaggtatctg
acaatttacaacgaccagcaagttggagagggcaaatatttctttgcagatattgtactt
ggtaacgacacaatacctctgacagtcacagacgcattaaagaattgcaaagacggacag
ggtgcattcactgcattcaaactagacaacagattcgacttggcagatatgctaaattac
tccaagacactagatgtacaggctgaagtcgatgcaatcaacgtcaacctttcgtcagtg
aaaatttactcatccagtcttcagacacaattaagtgacctaaaagacgcagtgaatatc
agttttacggacttctatactgagctggattcaaatataactattgtaaatttgagcagc
ctagctgatgatttggatgcttatgccgatctaataggtgaagcgacagcaaaggctggt
atcaaagctgaagcaaataaattgcgagcaattgaggcggaagagtatgcctatgttgaa
agtaatgtgacggccttgaatacatctgtagctgaaatggacgctgttgtttctaatatc
ccgactatggtggacaatttagactatggacttcaaactgcggatgattatattcaaaat
aacggaagtgacgtattgagatcgattttgaatacctacgccaatcgtctgcttggcata
atagattcgtatgtagcattcacagatgatgcggtcaaaaaccagatgggatcatgtgag
cctgtttggaacatttacaattccctgcttgtgtacacattttgctataatcttatggat
tgcttcaatggattctggttttcactaggatgggtcattttcttcttcatgccatctgtt
atcttttctgtgaagctagccaaatatttcagacaaatggacagggcagatgatggtcta
ttagactcggacacacctccacctccttcagcaaacggtgaaaagaaccctaatgcaggg
ttaggtcaagaacctgtgtcacaagatatgccttcaaaggcaaagttttggatgaggaac
aacaaggtttctcacaaagacaacgttgatgattgcgcatcatcacccattccacctttc
ccatcaaaagaatcacgtgactatcttgagcaggtaccgtcaaatttatatgaagatagg
tcttttaatgacatggggagtagttcccatccagtaacatttagcccgagcacatctaac
tgcgtaaatccagcttcctctcatccagggagttcttgtgaggaagaagtgtgtaatgac
aataaatcgctagtcaatgattatgcaaaactcagtgcaccagaagaggcgagtactcat
attgatgcagataatgatataatcaacataacagttggtgaaacgtcaaatttatccgac
tttgaacaacacgaagcaaagcccaagtcaagtgatatgacatcttcggaagatctggaa
gcaaagaccccttcgagtttagatggtgatcacaaagaacctccgacgacagactccaag
aatgacatctctcctgtgactgagaatgaaataggtagtgaccctatacccccgatacaa
aataataaagaaagtcatatattagtacaaccaaaagctgacagcgattcccaaaacatc
tctgttgaacagcaagttcactctgttccagaggaaacagaaaaacaaacttcttctatc
caagaacttgataaagaagatacacgcgaacagggttttccagaagaaaccatcgataaa
gcagttctctctcctagtcctcaagctttattggacaatggtgaaaccttgcaaggatca
ggagaaggtttatctgcaacatgtagagaagagtcaacgctgactccagtagagtaa
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