Mercenaria mercenaria (northern quahog): 123547197
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Entry
123547197 CDS
T07835
Name
(RefSeq) transcription termination factor 2-like isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123547197
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123547197
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
NodZ
Motif
Other DBs
NCBI-GeneID:
123547197
NCBI-ProteinID:
XP_053407437
LinkDB
All DBs
Position
9:complement(57184749..57233389)
Genome browser
AA seq
1217 aa
AA seq
DB search
MDSERRTKVPEQLIRPKNHQPLKDLNYMQSSSSRPDIGGKDSKVTMESGKQKQKISLAVY
RERAKSKSPAKPENELEKVDEVTKGLEKKDEGKASEIALLANPGIREERAMSTDDVADVS
IDLANMSIDQTDTYLDEKTGTFIENGKAKESGKSDQQTGLNPQKKDNKLKLKKSTSLTRT
TEKDIGKMVRSDKSDSSLMMKDTDQKAKIADENSEMFSLSLSERLRIKSGGSQSGSSFDT
QENKVKLQSGSQNGIGSLDVNSAKPGNREKFLTRSPEVIDLTEDEESPVPEPVKHNQRQD
SSNRETKKPDNIRETFGMGKKQPMESFQSLNKHPAPNVIHVPPKQSQQWIQPREPAQSHG
TQGFKPATEELEQMVKADIARRNELSKTLEKQKSLVATVKMSQLPDKGEKLRANIDNITK
NITDLTMKIKQNVEVLNRKKAQSQGAGQPKVIQSQGVGQPNVIMIRPDGSVVKKEQNVSS
QPSNQPQVIKIFPNGTSVVQQPGNHQPHNPDNLRQTSLMPHVAQIPPHILQQMYAANPQA
MQLYGGRMTAARLREVGSVTKEAIEKLHKQLETCPKSTEELEDPEGVVIPLMTHQKQALM
WLVWRERQTPSGGILADDMGLGKTLTMISLIIKQKELRKGGSEEDKQVWLNRDKQLEKLG
KSVVKSNATLVICPASLIHQWKTEIERRCKPGLLRVCMYHGPNREANVLKLASHDVVITT
YNIIAKEVELDENDKNGEQPVKDDNDVEDKGKSEGEENKVEDKPRRNMPNVMRIAWERII
LDEGHNIKNHKSLQSRAVCRLRAGFRWALTGTPIQNDLLDMYSLLRFLRCTPFDEYKVWK
RQVDTGSSTGQNRLNVLVKTLLLRRTKSQTGATGKPLVPLPEKSSRTHELQLSEQERQVY
DKVFAQSRSVLKEYLKRHEEKEMLKDGYVPPKPSNPFMDKSPSSSLVPRSGSGLSGTQST
TEGAGTSQATGQHILVMLLRLRQCCCHLSLMKDALDEETQSNEGLELTLEEQMMDLMLND
EKEEEPVVKKSSLIFEKEALSTKMQALMNELREIHRPTSMKEKCKSVIVSQWTKMLDIVA
VHLRKLNIRCSVIQGNIPAKKRMEFVDQFNNDKHGPEVMLVSLRAGGCGLNLIGGNHLFL
LDSHWNPALEDQACDRIYRVGQKKNVYIHRFLCKDTVEEKILQLQKRKMDLAKNVLTGSA
MSKNKLTLADLRMLFGV
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggattctgaaagaagaaccaaagtaccagaacaactgataaggccaaaaaatcatcag
ccattgaaagacttgaattacatgcaatcgtcttctagtagacctgatattggggggaag
gattccaaggttacaatggaatcgggcaagcaaaaacagaaaatcagtttagctgtatat
cgtgaacgtgcaaagtcaaaaagtccagctaaaccagagaatgaacttgaaaaagttgat
gaggtaacaaagggattagaaaagaaagatgaaggaaaagcttcagaaattgcactgtta
gcaaatccagggattagagaggaaagagctatgagtacagatgacgttgctgatgttagt
atagatcttgcaaacatgagtattgatcagacggacacgtatcttgatgaaaaaactgga
acatttattgaaaatggaaaagctaaagaatctggaaaaagtgatcaacagactggattg
aacccacaaaagaaagataataagttaaagctgaaaaagtctacaagtttgactagaaca
actgaaaaagacattgggaaaatggtgagatccgataaatcagacagttctttaatgatg
aaggatactgatcaaaaagcaaaaattgctgatgagaatagtgaaatgttcagcttgtct
ttgtcagagaggttgagaatcaagtctggtggtagccagtctggcagcagttttgatacg
caggaaaacaaggtaaagctacagtctggttcacaaaatggaattggttcattagatgtt
aattctgctaagccaggaaacagagagaaatttctgactcgttcccctgaggttattgat
cttactgaagatgaggagagtccagtgcctgaaccagtcaagcataatcagaggcaggac
tcttcaaatagagaaacaaagaaaccagataacattagggagacctttggaatgggaaag
aaacagccaatggaatcgtttcaatcactgaacaagcacccagctccaaatgtgatacat
gtaccacctaaacagtcccagcaatggattcagccaagggagccggcacagtctcatgga
acacaggggtttaaaccagccactgaagaacttgaacagatggttaaagcagacatagca
aggagaaatgaactgtcaaagacattagagaaacaaaagagtttagtagccacagtgaag
atgtcgcagttacctgacaaaggggaaaaattaagagcaaacatagataatataacaaaa
aatattacagatttaacaatgaaaatcaaacaaaatgtggaagttttgaacagaaagaaa
gcccagtcacaaggtgcgggtcaaccaaaagttatccagtcacaaggtgtgggtcaacca
aatgtaataatgatacgtcctgatggtagtgttgtgaagaaagaacaaaatgtgagttca
cagccgtcaaatcagcctcaggtgatcaaaatttttccaaatggtacatcagtggttcag
cagccaggaaaccaccagccacacaacccagacaacctgagacagacatctttaatgcca
catgttgcacagataccacctcatatacttcagcagatgtatgcagctaatccacaggct
atgcagctgtatggaggtcgtatgacagcagccaggctgagagaagtgggcagtgtaacc
aaggaagctattgaaaaattgcacaaacagttggagacgtgtcctaagtcaactgaagaa
ttagaggaccctgaaggggtagtgataccactgatgacccaccagaaacaggcactgatg
tggctagtgtggagagaaaggcagacaccctctggtggcattcttgctgatgacatgggt
ctgggtaaaacactgacaatgatatcattgattataaaacagaaggaacttcggaaagga
ggatctgaggaagataaacaagtctggctaaacagagataaacaactcgaaaaattgggt
aaatcagtagtgaaatcaaatgctacattagtaatatgtccagcttctttgatacatcag
tggaaaacagagatagaaaggcgatgtaaacctggtctactccgtgtctgtatgtaccat
ggtcccaacagggaagcaaatgttctcaagttggcaagtcatgatgtcgtgattactacg
tataatatcatcgccaaggaagtagaacttgatgaaaatgacaaaaatggagagcagccg
gtaaaagatgacaatgatgttgaggataaaggcaaatctgagggagaggaaaataaggtt
gaagacaaacctaggaggaatatgccaaatgtgatgagaattgcttgggagagaattatc
ttagatgaaggacataacatcaagaaccacaagagcttgcagtcccgggctgtatgtaga
ttgagagcgggcttcagatgggctctcactggcacacccatacaaaatgatctccttgat
atgtactcgttactcaggtttttgagatgtactccatttgatgaatacaaggtttggaaa
cgacaggttgacactggaagttcaactgggcagaacagattgaatgtactggtgaaaact
ttgttattgaggagaaccaagtcacagacaggagctacaggaaaaccgctggtaccttta
ccagaaaagtcctctagaacacatgaacttcagttgtcagagcaggagagacaggtgtat
gacaaggtctttgcacagtctaggtctgtcctaaaagaatatttgaagagacatgaggaa
aaagaaatgttaaaggatggctacgttccaccaaaaccatccaatccctttatggataag
tcaccatcatctagtctggtacccaggtctggctcagggctgtcggggacacagtctaca
acagaaggagcaggtaccagtcaggcgactggacagcacattttggtcatgttgctacgg
ttacggcagtgctgctgccatctgagtctaatgaaagatgcattagatgaagagacgcaa
agtaatgaggggctagagctaacattagaagaacagatgatggacttgatgcttaatgat
gagaaggaagaagaacctgttgttaaaaagtcttcactcatctttgaaaaggaagcacta
agtactaagatgcaagctttgatgaatgagctgagagaaatccatagacccacaagtatg
aaagaaaaatgtaaaagtgtgattgtatcccagtggacaaagatgttggacattgtagct
gtacatctacgtaaactaaacattcgttgttcagtcatacaaggcaatattcctgcaaag
aagagaatggagtttgtggatcagtttaacaatgataagcatggcccagaggtaatgctc
gtgtctctacgtgctggagggtgtggcctcaacctgattggtggaaatcaccttttctta
ctagacagtcactggaaccctgccctggaggaccaggcatgtgaccgaatatacagggtt
gggcaaaagaaaaatgtgtatattcataggtttttatgtaaagacacagttgaagaaaag
atacttcagttacagaaaagaaagatggatttagcaaagaatgtactaactgggagtgca
atgtccaagaataaattaacattggcagatctaaggatgctatttggtgtttga
DBGET
integrated database retrieval system
