Mercenaria mercenaria (northern quahog): 123547328
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Entry
123547328 CDS
T07835
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123547328
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmer01009
]
123547328
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123547328
03036 Chromosome and associated proteins [BR:
mmer03036
]
123547328
Protein phosphatases and associated proteins [BR:
mmer01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123547328
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123547328
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123547328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
RHS_repeat
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
123547328
NCBI-ProteinID:
XP_045190275
LinkDB
All DBs
Position
9:65593325..65641798
Genome browser
AA seq
493 aa
AA seq
DB search
MSDTTGMISPTKEHKGPGFGSKQLHKIQSMLHHRPRAGSLGKKDKPENIPGSGGEIQWCF
SQVKGTIEEDITEADIISCVEFNSNGQLLATGDKGGRVVIFQRDGKGNPQFTGARGEYNV
YSTFQSHEPEFDYLKSLEIEEKINKIRWLKRSNPANFLLSTNDKTVKLWKVTERDKRPEG
YNLKDDAGLLRDPTSITSLRVPSFKPMELLVEASPRRIFANAHTYHINSISVNSDQETYL
SADDLRINLWHLEVTNQSFNIVDIKPANMEELTEVITAAEFHPTECNLFVYSSSKGTIRL
CDMREQALCDKHAKLFEEPEDPTNRSFFSEIISSISDVKFSHNGRYMVTRDYLSVKVWDL
QMDSKPIETFQVHEYLRSKLCSLYENDCIFDKFECAWSGNDRHIMTGSYNNFFRMFDRDS
KRDVTLEASRENVKPKTVLKPRKVCSGGKRKKEEISVDCLDFNRKILHSAWHPQENILAV
AATNNLYLFCSKE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacactacaggaatgatttcacccaccaaggagcacaaggggccggggttcggg
agcaagcagctacacaagatccagagtatgctacatcatcgcccgcgagccggatctctg
gggaaaaaggacaaacccgagaatattcccggcagtggtggagaaattcagtggtgcttc
tcgcaagttaaaggaacaatagaagaggatataacggaggctgatataatttcttgtgtg
gagttcaacagtaatggacagttgctagccacaggagataaaggaggacgtgttgtgata
tttcaacgcgatggcaagggtaatccacagtttaccggtgcccgtggggaatacaacgtg
tacagcacattccaaagtcacgaaccagagtttgattatttgaagagcttagaaatagag
gaaaaaatcaacaagatcagatggttgaagagaagcaacccagcaaactttctgttgtct
accaatgataaaacagtgaagttatggaaagtaaccgagagagacaagagacctgaaggt
tataacttgaaggatgatgctggtctcttgcgtgatccaacttctattacatcattacgg
gtacccagcttcaaaccaatggagctactggttgaagcaagtccacgacgtatttttgcc
aatgctcacacctatcacatcaactcaatctcagtgaacagtgaccaagaaacgtacctg
tcagctgatgacctgcgcattaatctttggcatttagaagtcactaatcagagtttcaat
atagtagatataaagccagccaatatggaggagcttacagaggtgattacagctgccgaa
ttccatcccactgagtgtaacctgtttgtttacagtagcagtaagggaactatacgtctc
tgtgatatgcgtgaacaagctttgtgtgacaaacatgccaaattgtttgaagagccggag
gaccctacaaatagaagttttttctcagagattatatctagtatatcggatgttaaattt
agtcataatggtcgttacatggtgacacgtgactatttatctgtgaaggtctgggacctg
cagatggattctaaacctatagagacatttcaagtgcacgagtacctacgtagtaaattg
tgttcattgtatgagaatgactgtatatttgacaagtttgaatgtgcttggagtggaaat
gataggcatataatgactggatcgtacaacaatttctttcgtatgtttgaccgtgattca
aaacgtgatgtgacattggaagccagtcgtgaaaacgttaaaccaaaaactgtcctaaaa
cctcgtaaagtttgtagtggtggaaaacgaaagaaggaagagattagtgtagattgtttg
gacttcaataggaaaattctccactcagcctggcatccacaagagaatatactggctgta
gctgcaactaataatttgtatctattctgttcaaaggaatag
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