Mercenaria mercenaria (northern quahog): 123547395
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Entry
123547395 CDS
T07835
Name
(RefSeq) DNA polymerase lambda-like isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03410
Base excision repair
mmer03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123547395
03450 Non-homologous end-joining
123547395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123547395
Enzymes [BR:
mmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
123547395
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
123547395
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
123547395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
NTP_transf_2
BRCT_2
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
123547395
NCBI-ProteinID:
XP_045190401
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All DBs
Position
9:complement(69705773..69757490)
Genome browser
AA seq
565 aa
AA seq
DB search
MESNKRPICSQSDGNESKKRKIVRSSENKEKPANFLASLHVFILQAGIEKMRMNIFKTQL
EKYGGNVLNDLTDVATHLVVDDKMEADRMCRLLKVSTPPTGICIVKSSWLSGCFRQKALL
DSSEFLLDCSKFTTTKTLNSNSGDNGTEHPSSSKSSDLNTADDSELKPEFPKVGVMFGHK
TKANHYDSEDSDYCPSGEESELETDYSTPSTTTTPSTSPKKNLPVGNWVCAQSSKTAVEN
CNKHITDKLEEMVRTYESTNDKWRAFGYQKAIQVLKKQSKPITSYEEAMALPSIGKRLAE
KIWEIAESGELRKLNELRSSDEIKVIEMFKDVWGAGAHTARTWYQQGFRTLEDLRTKANL
THQQKVGLRCYDDILDRMPRSEAGEIEKVVKDAAESLQEGIICQACGSYRRGKATCGDVD
ILVTHPDGKSHKGIFAKLLAKLKDQGFLTDDLVTAEDNGNQKKYLGVCKLPGEGRKHRRL
DIIVVPYDEYACALVYFTGSAHFNRSLRHLAKKMGMSLSEHSLNVGVVRNGAEKIFEGTP
VPTPTEESVLTQLGVPYRPPEERDH
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgaataaaagacccatttgttcccagtcagacggaaatgagtcgaagaagaga
aaaattgtgcgatcttctgaaaataaggaaaagccggcaaacttcttagcatctttgcac
gtttttattttgcaagcagggatcgagaaaatgcgaatgaatatatttaaaacacagctt
gaaaagtacggtggtaatgtattaaatgacctaacagatgttgcaactcatttagttgtc
gatgacaaaatggaagctgatcggatgtgtagacttttaaaagtcagtaccccacccaca
ggtatttgcattgtaaagtcaagttggcttagtggctgctttcgacaaaaagctttatta
gacagttcagagttcttgctggattgttcaaaatttacaacaactaagactttaaactca
aattctggagataatggaactgaacatccttcatcttcaaaaagttcagatttaaacaca
gctgatgactctgaacttaaaccagaatttccaaaagtaggagtaatgtttggtcataag
accaaagctaatcattatgatagtgaagatagtgattactgcccaagtggggaagaatct
gagttggaaacagattactcgactccatcaaccaccacaacaccttcaacttctccaaag
aaaaacttgccagttggtaattgggtgtgtgcacaatcttcaaagacagctgtggagaac
tgtaataagcacattacagataagttggaggaaatggtgagaacttacgaatcaacaaat
gacaaatggcgagcttttggttaccagaaggcgattcaagttttgaaaaagcagtcaaag
ccgatcacttcctatgaggaagctatggctttaccaagtataggaaagcgacttgcagag
aagatatgggaaattgctgaaagtggagaactacgcaaactgaatgagcttagatctagt
gatgaaataaaagtgattgagatgtttaaagatgtgtggggagctggggcacacactgct
aggacctggtaccagcagggatttaggacactggaagacctgaggacgaaggcaaatctg
acacatcagcagaaagtaggcctgagatgttacgatgatatcctagacagaatgccaagg
tctgaagctggggagatagaaaaagtggtgaaagatgcagctgaaagccttcaggaaggt
ataatatgccaagcttgtggatcatacaggcgaggtaaagcaacttgtggtgatgttgat
attcttgttacacatcccgatggaaaatctcataaaggaatctttgctaaactgttagca
aaactgaaagatcaaggctttcttacagacgaccttgtcacagcagaagataacgggaac
caaaagaaatatctgggtgtctgtaaattacctggcgaaggtagaaagcatagacgcctg
gatattattgtcgtcccatatgatgaatatgcatgtgcacttgtatattttactggctcc
gcccacttcaacagatctctacggcacctcgcaaagaaaatgggaatgtcgttgtcagaa
cattccttgaatgtcggcgttgtccgaaatggcgctgagaaaatattcgaaggtacgcca
gtaccaacaccaactgaagaatctgtattaacacagcttggggtaccatacagacctcca
gaagaaagagaccattga
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