Mercenaria mercenaria (northern quahog): 123547445
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Entry
123547445 CDS
T07835
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123547445
Enzymes [BR:
mmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123547445
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123547445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
Prok-RING_4
zf-rbx1
zf-C3HC4_5
zf-UDP
zf-RING_4
zf-RING_11
Rad50_zn_hook
Rtf2
DUF1272
Motif
Other DBs
NCBI-GeneID:
123547445
NCBI-ProteinID:
XP_045190500
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All DBs
Position
9:complement(72479259..72502369)
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AA seq
200 aa
AA seq
DB search
MSSVRSRLRSVRRVPRRRSRRLRSAAGSDTVMEDPIVVEDHTHDESCIDLTSTADDEFVD
LTSSQRSHGSGDLLGANDSSVVVIGSPNDSPPAHRRGRRRLPPAEAFDDDLPPVPFDLPS
PIPSSSGSSSNFQSPEPIKITCPVCLDDDKTIKKDKRKLATTTCGHVFCQPCVEGSIRTQ
NCCPVCRKKLTLRNVFVLHI
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgtccgatctagactacgttctgttcgtagagtgccaagaagacgaagtcgt
agattgagatcagctgctggttcagacacagttatggaggacccaattgtagttgaggat
cacacacatgatgaaagttgtatagacttgacatcgactgcggatgatgagtttgttgac
ctcacgtctagtcagaggtcacatggtagcggtgatttactgggggcaaatgatagctct
gttgtggtaattggatcgccaaatgactccccacctgcacacagaagaggtcgacgtaga
ttacctccagctgaagcatttgacgatgacctacctcctgtgccgtttgatttaccaagc
ccaataccgtcttcaagtggatccagttccaattttcagtcgccagaaccaataaaaata
acatgtccagtttgtctggatgatgataaaacgattaaaaaagacaagagaaagctagca
acaacaacatgtggacatgttttctgccagccgtgtgtagagggatctataagaactcag
aactgctgtcctgtgtgtagaaagaaattaacattaagaaatgtttttgttcttcatata
tga
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