Mercenaria mercenaria (northern quahog): 123547502
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Entry
123547502 CDS
T07835
Name
(RefSeq) DNA polymerase nu-like isoform X1
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
123547502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123547502
Enzymes [BR:
mmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
123547502
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
123547502
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Tir_receptor_N
DUF3336
Con-13
Motif
Other DBs
NCBI-GeneID:
123547502
NCBI-ProteinID:
XP_053407724
LinkDB
All DBs
Position
9:76149123..76183678
Genome browser
AA seq
1085 aa
AA seq
DB search
MAAVWTPKEKPVVLDKFCHLSLDAQKVMASMYRDFHQRKAEIKASYTLHNAAFKDTRDYN
EERSTLMEFSRRGRLQEQRSEKFQKQRYTASSPALSGERETGIVGHNINKKSSVPYFLSG
ASETDCADGQENRERRNTGSIADEENMDSLSPVRNNIKDCDECYAGDNIKSPPVETRDFE
ILSQYHLMDTQADLFSDSHNNVRNGATMSNQSKTNSGQDNSVNDTLNKGKGKEVRLPTTS
FDYSHTHFNERLADSEHSGLKLLELNEESASYIRANQNQSGVMKPRQGSTAESTEDSTGM
WGYDRDDRKIDKSYSCHIITNGVQSKQKELVRDKLLCEESPYLDRTPKVARKSFTVNDSS
RDAPHKKKHKLIQTRIMFEKLGSETHKDEAKTGTFSGKKHFTGDEGSEIPTKKLKNCSLN
TREPINNVAENITYISKLPVDTVDQVCSQLLQAEELVLCLVFANGSTQLRDNLFTAENKK
KTTTKVKKHSEVDGIAIYSTAPRTDRVYVFSMQDRRSAVCEKLREFWGTLLSSDDVRKIG
FQIKEVYLALFANFDFEYNRVDLSWTVMDTSIAVWLLDPDKPVSSFEHLLSVLNMPKQTP
SKSCVDALQEDMTLLSAVMKKIYQMLQSKDMWNLFYCLETKLVNVLAGMERRRMTISIHT
LLHFSSVLKRNLTRLEEKAHKVAGHAFLLNSHHQLRQVLFEELKLDSFLQGKTKLVKTSV
TRETSTSETVLTQLLPFHPLPEVVLEYRQLQKLKSTYIDGILSCVSDSYLRTHWDQTAAA
TGRLTSHHPNIQAILKLPVTIKDHQTNFIVGKKFSEDSAASVVQFNARDPFISRPQWSLL
SADFQQIELRLLGHLADDPILLNIFNDTNVPDIFNALAAQWLSKAATDVTDADREQTKRV
VYSVMYGVGKEKLADYLKCTPDNAKAVMASFLLKFPAVNQFTKYCVEFCQKHGYTRTIFK
RRRLFPNIRHGNPALRAQAERQCVNFCVQGSAADICKAALLQVENALAKNPDINARLLVQ
IHDELLLEVADSDLTSVTGLVKSVMESEEKLCGSIVKLKVPIPVSVSVGKKWGQMEFISV
TCNNG
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtatggactccaaaagagaagccagttgtcttggacaagttttgtcacctt
tccctagatgcacagaaagtcatggcttccatgtatagagattttcatcagagaaaagca
gaaattaaagcttcgtatacattgcacaatgcagcatttaaagacacaagagattacaat
gaggaaagatcaacattgatggaattttctagaagaggcaggcttcaagagcaaaggagc
gaaaagtttcaaaaacaaagatacactgcttcaagcccagcattgagtggtgaaagagaa
actggtattgtgggtcataacattaataaaaagtcttctgtaccttattttctttcgggt
gcatctgaaactgattgtgcagatggtcaagaaaacagagaaaggcgtaacactggcagt
attgctgatgaagaaaacatggatagtctttcccctgtaagaaataatataaaagattgt
gatgagtgttacgctggggataacattaagtctcctccagtagagacaagagattttgaa
atactctcacagtaccatctaatggatacacaggctgaccttttttctgattcacataac
aatgtaaggaatggtgcaacaatgtcaaaccagagcaaaacaaatagtggacaagacaat
tcagttaatgacactttgaacaaaggcaaaggaaaagaggtcagattgcctacgacatca
tttgactattcccatacgcatttcaatgaaagattggctgattctgaacactctggtttg
aaattattagaactaaatgaagaaagtgcatcttacattcgtgcaaatcagaatcaatct
ggtgtgatgaaacctagacaaggcagcactgcagaaagtactgaggacagcacaggtatg
tggggctatgacagagatgatagaaagatagataagtcatacagctgtcatatcattacc
aatggtgtccagtcaaagcagaaagagttggtcagggacaagttgttgtgtgaggagagt
ccatacctcgacaggacacccaaagtagccagaaagtctttcactgtgaatgattccagt
cgagatgctccccataaaaagaaacacaaactgatacagacaagaatcatgtttgaaaaa
cttggttctgagactcataaagatgaagctaagacagggactttctcaggtaagaagcat
tttactggagatgaaggttctgaaatacccacaaagaagcttaagaattgtagtttgaac
acaagagaaccaattaacaatgttgcagaaaatattacttacataagtaaattgcctgtg
gatacagtggatcaggtgtgttctcagttactgcaagcagaggagcttgttctttgcctt
gtttttgctaacgggtcaacacaattgagggacaacttatttactgcagaaaataagaaa
aaaacaacaactaaagtaaagaagcactctgaagttgacggcatagccatatattcaact
gccccacgaacagatcgtgtatatgtgttctccatgcaagatcgaagatcagcagtctgt
gaaaagttaagagaattttggggaactttgctgagtagtgatgatgtaaggaagatagga
tttcagataaaagaagtatatcttgcattgttcgcaaactttgactttgagtacaacaga
gtggatctgtcctggacagtgatggatacaagtattgcagtatggttgttggatccagac
aagccagtctcttcctttgaacatcttctttcagtgcttaatatgccaaagcagacacca
agtaaatcatgtgtagatgctctccaagaggatatgactctgcttagtgcagtaatgaaa
aaaatttatcagatgttacagtcgaaagacatgtggaatttgttttactgtctggagaca
aagcttgtgaatgtgttagctggtatggagagaagacggatgaccataagtatccacact
cttctgcatttctcatcagtgttaaagagaaatttgacaagactggaagagaaagctcat
aaagttgctggtcatgctttcttgttgaacagtcatcatcaacttagacaggttttattc
gaagagttgaagctggactcctttttacaaggaaaaactaagcttgtcaagacaagtgtg
acacgtgagacttctacatcagagacagttctaacacagttacttccctttcatccattg
ccagaggttgtactggaatatagacagcttcagaagttgaagtcaacctatattgatgga
atattgagttgtgtaagtgatagttacctgaggacacattgggatcagaccgcagctgct
acgggaagactcacttcacatcaccctaacattcaggctatactaaaacttccagtcaca
attaaagatcaccagactaattttattgttgggaagaagttttcagaagatagtgctgct
agtgtggtgcagttcaatgcgcgagatccctttataagtagaccacagtggtccttgttg
tcagcagatttccaacagattgagctgcgattgttaggccatctagctgatgatcccata
ttgttaaatatcttcaatgatacaaatgtacctgatatatttaatgctctagcggctcaa
tggttgagtaaagctgccacggatgtaacagatgctgacagggaacaaacaaaacgtgtt
gtgtactcagtaatgtatggcgtcggaaaggagaaattagcagactacctgaaatgtaca
ccagataacgctaaagctgtcatggctagtttcttattgaagtttccagctgtaaatcag
tttacgaagtactgtgtggagttttgccaaaaacatggatacacacgcactattttcaag
agacgaagattgtttccaaacatccgacatgggaatcctgcactgagagcacaggcagag
agacagtgtgtaaacttttgtgtgcaaggttctgctgcagacatttgtaaggctgctttg
ctgcaagtagagaatgcccttgctaaaaatccagacattaatgcgagactgctggtccag
atccacgatgaactactcctggaagttgcagactccgatttaacttctgttacaggactg
gtgaagagtgtaatggagagtgaagagaagctgtgtggctcaattgtcaaactgaaggtg
cctataccggtgtccgttagtgtaggaaagaaatggggacagatggagtttatatcagtt
acatgtaataatgggtaa
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