Mercenaria mercenaria (northern quahog): 123548433
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Entry
123548433 CDS
T07835
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123548433
Spliceosome [BR:
mmer03041
]
Common components
Common spliceosomal components
General mRNP proteins
123548433
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Nup35_RRM_2
RBD_DEAH11
DUF1866
DUF7440
Motif
Other DBs
NCBI-GeneID:
123548433
NCBI-ProteinID:
XP_045191633
LinkDB
All DBs
Position
6:complement(79514258..79540679)
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AA seq
516 aa
AA seq
DB search
MADDFDVEAMLEAPYRKEDDGRGDASYDRDRKSSRRRSRERSRDRDRDKRRSREKDKERR
RSKERRRSRDRERKRSRSRERKRSRSKERRRSRDRGRHRSKSPKKFIKRSISKSPVREPP
QDLTPEERDARTVFCMQLSARIRPRDLEEFFSSVGEVKDVRLITDNKTRRSKGIAYIEFK
DTESVPLAMGLTNQKLLGVPIIVQASQAEKNRTPMPTNIITKNQQTGPMRLYVGSLHFNI
TEDMLRGIFEPFGKIEDIKLIRDHETGKSHGYGFITYKSAEDAKKALEQLNGFELAGRPM
KVGNVTERQMDVQTGGQLDNDELDRAGIDLGATGRLQLMAKLAEGTGFEIPDYAKNSLQM
QGMPATGPAAPAIKPQVPAATTQAPPIATQCFMLSNMFDPTIESKTSWDQEIRDDVIEEC
SKHGGVLHIFVDKASAQGNVYVKCPTIAAAVASVNSLHGRYFGGKIITAAYVPLPNYHQL
FPEAQRASQLLLPSTQTLSIGGFAPQTSLFNGSLVR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgattttgatgtggaagccatgttggaggcaccatatagaaaggaggatgat
ggccgtggagatgcttcctacgacagagatcgcaagtcctctcgaaggagaagccgagag
agaagtagagatcgagatagggacaagagaaggagtagagagaaggataaggagagaaga
agaagcaaggagagacgccgcagccgagacagggaaaggaaacgtagtcgcagccgagaa
aggaagaggagtaggagcaaggaaagacgcaggagtagagaccggggaaggcacaggagc
aagtcgcccaaaaaattcatcaaacgcagcatcagtaaaagtcctgtcagggagccacca
caagatctcactccagaagaacgtgatgcaaggactgttttctgtatgcagttatcagcc
agaattagacctcgagatcttgaggagttcttctcttcagtgggtgaggtgaaagatgtt
agactgatcacagacaataagacacggaggtcaaaaggtatagcatatatagagttcaag
gacacagaatcggttccacttgccatgggtttgaccaatcagaaacttctaggtgtacca
attatagtacaggcgtcacaagcagagaagaatagaactcccatgccaacaaacattata
acaaagaatcaacagactggtcctatgaggctgtatgtaggctcattgcattttaacatc
acagaggatatgctgcgaggaatatttgaaccatttggaaagattgaggacatcaaactt
atcagggatcatgagacaggaaaatcacatggttatggttttattacatataaaagtgcc
gaggatgccaaaaaagccctggaacagttgaatggttttgagttggcaggacgaccaatg
aaggttggaaatgttacagagagacagatggatgtacagacaggtggacagctggataat
gatgaacttgaccgtgctggtatagatctcggagcaactggcaggttacagctgatggcc
aaactggcagaaggaactgggtttgagataccagattatgcaaagaactccctacagatg
caaggaatgccagccacaggcccagcagctcctgcaataaaacctcaggtccctgctgcc
accactcaagcaccacccatagcaacacagtgtttcatgctctccaatatgtttgatcct
acaattgaatcaaaaacaagctgggatcaggaaatccgggatgatgtgattgaagagtgt
agtaagcatggtggtgtgttacacatctttgtggacaaggcgtcggcacaaggaaatgtt
tatgtaaaatgtccaacaatagcagcagcagtggcatctgttaactcattacatggaaga
tattttggaggtaaaatcataacagcagcatacgtaccacttccgaattaccaccagttg
tttccagaggctcagcgagctagtcaattacttctcccttctacacagactctcagtatt
ggaggatttgcaccacaaacttctttattcaacgggagtcttgtcagatga
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