Mercenaria mercenaria (northern quahog): 123548501
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Entry
123548501 CDS
T07835
Name
(RefSeq) beta-1-syntrophin-like isoform X1
KO
K24064
beta-syntrophin
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123548501
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
123548501
NCBI-ProteinID:
XP_045191737
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Position
6:75152057..75173798
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AA seq
493 aa
AA seq
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MATNITGRTGHFEVYIRQQWCKVTVTLNDESLTLSLDEPPENMSTSSTNNDISAQTTNIS
TNHQEVAHVPDNIPGQKRTVKVIKEETYGLGISIKGGRENKMPILISKIFKGMAADKTGQ
LYVGDAILAVNGEDLCNATHDEAVRALKNAGKVVEVEVRYLREVTPYFRKNSALNEIGWG
SHETPQDGVKSSWSESKTIPLKLCYLCRNLSMCDPEKRTLELHSPDGKSSCTLRFPDVST
ANEWFNALHANVTMLTSQSVQDANTIMISAPNQREITHMGWLSEQLLNDQGTPNWKPVFI
ALTDKDMLMYDTVPWSKEEWATPFQSHPLLATRLVHSGHQTTSAAGADVLSFGTRSGTRN
GVEMHIFRVETQRDLAHWSRALVQGSHGAAALVKEVTCPASWQNHKGKLTLHFENGFALH
ALKPATEGDKPKLLWYFPFEKLRMSADDGHRLLWLDFGEEGEQELDLESCPKPLVFVLHT
FLSAKVSRLGLVA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaacataactggacgaacggggcatttcgaagtttatatacgccagcagtgg
tgtaaggtgacagtaacgttgaacgatgaatctttaaccttatccctcgatgaaccacca
gaaaatatgtccacatcttctacaaacaacgatatatccgctcagactacgaacatttca
acaaatcatcaagaagtcgctcatgttcccgacaatatacctggtcaaaaacgcactgtc
aaggttataaaagaagaaacttatgggttaggtataagtattaaaggtggaagagagaat
aaaatgcccattttgatcagtaagatatttaaaggcatggcagctgataaaactggacag
ttgtatgttggcgatgcaatcctcgctgtgaatggggaagatctctgtaatgcaacacat
gatgaggctgtcagggcattgaagaatgcaggaaaagtggttgaagttgaagttcgatac
ctgcgagaagttacaccatactttcgaaagaactctgctttgaatgaaataggctgggga
agccatgaaaccccacaagatggtgtgaaaagcagctggtctgagagcaaaacaatacca
ttaaaactttgttatctgtgtcgaaatctaagtatgtgtgacccagaaaagaggacactg
gaacttcactcccctgatgggaaaagctcgtgtactttacgttttcctgatgtttcaaca
gctaatgaatggttcaatgcccttcatgctaatgtaactatgttaacctctcagtctgta
caagatgctaatactattatgatttctgcaccaaatcagcgcgagattacacatatgggg
tggctctcagaacagttattgaatgatcagggaacacctaattggaagccagtatttata
gcgttaacagacaaagacatgttgatgtatgacacagtgccatggagtaaggaggagtgg
gcaactccattccaaagtcatccattacttgcaacaaggttggtacattctggtcaccaa
acaacctcagcagcaggtgctgatgttctctcatttgggacacgctcgggaaccagaaat
ggagttgagatgcacatatttcgtgttgaaacacaaagggatcttgctcactggtctcgt
gctcttgtacaaggatcacacggagcagctgctcttgtcaaggaagtgacttgtcctgcg
agttggcaaaaccacaaaggtaaactgacgttacactttgagaatggatttgctctacat
gccttaaaacctgctacagagggagacaaaccaaagctgctgtggtattttccgtttgag
aagttacgtatgtctgctgatgatggacatagactgctgtggttagattttggggaggag
ggagaacaggagttagatttagagtcttgtccaaaacctctcgtttttgtgcttcataca
tttctttctgcaaaagtgagtcgtcttggactggttgcttga
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