Mercenaria mercenaria (northern quahog): 123548533
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Entry
123548533 CDS
T07835
Name
(RefSeq) spectrin alpha chain-like isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123548533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mmer04812
]
123548533
Cytoskeleton proteins [BR:
mmer04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
123548533
Intermediate filaments
Intermediate filament-binding proteins
123548533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
SH3_9
EF-hand_6
EF-hand_8
SH3_2
EF-hand_5
SH3_3
Spectrin_SYNE1
SH3_10
Motif
Other DBs
NCBI-GeneID:
123548533
NCBI-ProteinID:
XP_045191791
LinkDB
All DBs
Position
15:24294520..24353855
Genome browser
AA seq
2497 aa
AA seq
DB search
MTEVQPREIKILETAEDIQQRREEVLGRYSAFKQAISDRRNKLEDSRRYQYFKRDADELE
SWIYEKLQTASDESYKDPTNLQAKIQKHQAFEAEVAAHANAIVVLDNTGTEMIDQGHFAS
EIIKERLDELHRLWELLLSKLKEKGTKLQQALKLVQFMRECNEVMFWIHDREAFVTSEEF
GQDLEHVEVLQKKFDEFQKDLQNHEDKVTEVNTLSQQLLEDGHPDEETITQKRDEVNEAW
ARLKQLSLLRQERLFGAHEIQRFNRDADETIAWIMEKDAILSTDDYGRDLASVQALRRKH
EGVERDLAALNEKVSALGAESKRLQDIHPDHADAINNKQTEIEDNWTRLKDKGGERKARL
DDSYHLHRFLADFRDLVSWVHDMKAIISADDLAKDVAGAEALLERHQEHKGEIDAREDSF
RSAMESGNRLVDTNHYAADEVREKLQTLSTEKNSLLEMWEERRILYEQCMDLQLFIRDTE
QADAWMTKQEAFLANEDLGDSLDSVEALFKKHDDFEKSLAAQEEKIKALDEFATKLIENE
HYAADDVAARRDQLLTRRNRLYEASQLRRHLLEESYKFQTFQRDCDETKSWINEKLKTAS
DENYLDPTNLQTKVQKHQNFEAEIEANKNRIEAISTSGEQLLAEEHYASDTIRERIDEIL
ELWENLQRQTEFKGNKLKEASQQQQFNRNVEDIETWLSEIEGQLMSEDYGKLLRRHGTLY
SVHMDLTSVQNLQKKHALLEADVAAHQDRIEGIAVQAQSFVDSGHFDSENIQAKQTQLLN
RYKALKEPMAARHQKLEDALRLQQFLRDVEDEEDWIREKEPIAASTNRGRDLIGVQNLMK
KHQALQAELAGHEPRINNVSQQGTDMIKDGHFAADEIQGKISDLEDRWQALKDKASQRKQ
DLEDSLQAQQYFADANEAESWMREKEPIASNTDYGKDEDSAEALLKKHEAFLSDLEAYST
VIEGLHDQAQACKQQEAPVIDDLGTEKVMALYDYTEKSPRETSMKKGDVLTLLNSTNKDW
WKVEVNDRQGFVPAAYVKKLDPSLSASRNNLMDEFTISVRQNQIETQYANLLDLGNQRRE
KIQESCKAYQLVREAAELAAWITEKEGIMVAENVGDDLEQVEEMQKKFDDFRKDLRTNEA
RLQELNSIADRLTAMGQTEAAEKIREQIATLNTRWATLQQVTADRAQTLGSAHEVQRFHR
DVDETKDWINEKNQALNNDNYGHDLASVQALQRKHEGLERDLAALGEKVRDLDESAKRLM
MTHPDQGEQIYEHQTEINEMWNELTAKADGRKAKLLDSYDLQRFLSDYRDLTSWINSMMA
LVSSDELAKDVTGAEALLERHQDLGHPPPSCENIEKLMASSTEPTVNLQMFSSEIVSHYG
ITQLPPQAEGEESEVEDEEHRTEIDARSGTFQAFETFGQQLLHNSHYASEDVKTRLEELA
VAREELEQAWIQRRMKLDQCLELQLFYRDCEQAEYWMASREAFLSGDQVDGDNVESLIKK
HEDFDRAISSQQEKIQALQVFADQLIGGEHYDAQAIEDKRDSVLDRWTNLKDALIDNRSK
LGEAQTLQQFSRDADEMENWLQEKLQIASDESYKDPANIQSKHQKHQGFEAELAANADRL
QALLATGQALIDQKQCAGSEEAVQARLESLASQWETLVAKSAEKSDKLKEASRQQTYNAG
VKDIEFWLGEVEQMLASEEYGKDLASVQNLSKKHQLLEADIAAHEDRIKDLNSQADQFID
SGVWDAESIEVRKRTINERYEKIKELAIVRKTRLNEANTMHQFLRDIDDEEAWINFPGHL
IEPSGEKKLLVGSEDYGKDLTGVQNLRKKHKRLDAELTSHEPAIQAVQETGAKLIGESDI
NTDDIQNRLEQLAKSWDELKQMAERRGQMLEESYAFQQFSANVDEEEAWISEKQRLLSGG
DLGDTMAAVQGLLKKHEVFETDFQVHRERCQEVQKEGEKLIQEGNHNKDSISQRNQGLQD
KLSALDEAAALRKAGLIDNSAFLQFIWKTDVVESWIADKENQVRSDDYGRDLSSVQTLLT
KQDTFDAGLQAFEKEGIQTITALKDQLIASKHAQTPAIEKRYNDVMTRWQNLLSDSEQRK
QTLLRLQDQYRQIEDLYLAFAKKASAFNSWFENAEEDLTDPVRCNSVEEIRHLRENHEQF
KASLSAAQADFNQLAALDKEIKSFNVGPNPYTWFTMEALQDTWNNLQKIIKERDVDLANE
QQRQEENDQLRKQFAQAANAFHAWLTETRMWLLDGGASMMEGSGTLEDQLEATKKKAVEV
RSQKGQLKRIEDLGAAMEERLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQAR
NRSGVSEDALREFSMMFKHFDKDKSGKLDHQEFKSCLRALGYDLPVVEDGQVDPEFQAIL
DMVDPNRDGHVSLQEYMAFMISRETENVQSSSEVEQAFRALTSGEKPFITSQELYANLTK
EQADYCIGRMKPYVDRTGRTIPDAYDYADFTQSMFVN
NT seq
7494 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggttcagcctcgagagataaagatcttagagactgctgaggacatccagcag
cgcagagaagaggttctcggtcgatattcagctttcaaacaggccatctcggaccgtcgt
aacaagctcgaggattcacgtagataccagtacttcaagagagatgcggatgaattggag
agctggatttatgagaaactacagactgcctcagatgagagttacaaagatccaacaaat
ttacaggcaaagattcagaagcaccaagcatttgaagctgaagttgctgcccatgccaat
gctattgttgtccttgacaacaccggaactgagatgatcgaccaaggtcactttgcctct
gaaatcatcaaggagcgccttgatgagttacacagactatgggagctgttattgtctaag
ttaaaggagaagggaaccaaattgcagcaggcattgaaacttgtacagttcatgagagaa
tgtaacgaggttatgttctggattcatgatagggaagctttcgtgacatcagaagagttt
ggacaagatcttgagcatgttgaagtgttacagaagaaatttgatgagttccagaaggat
ttacaaaaccatgaggacaaggtgacagaagtgaacacattgtcacagcagctgctggag
gacggacacccagacgaggagaccatcacacagaaaagagatgaagtgaatgaggcctgg
gccagactgaaacaactgtcactccttcgacaggaaagactcttcggagctcatgagatt
cagagatttaatagagatgctgatgagactattgcatggatcatggagaaagatgctatc
ctctccacagacgactatggccgtgaccttgccagtgttcaagcactcagacgtaaacat
gagggagtcgagagagacttggctgctcttaacgaaaaggtgtcagctcttggagcagag
tctaaacgtctacaagacatccaccctgatcatgccgacgctatcaataacaaacagact
gagatagaagataactggacacgcctgaaggataagggaggagagaggaaagccagactt
gatgattcgtaccaccttcacagattcttggccgactttcgtgatttggtatcctgggta
catgatatgaaggccatcatctcggcagatgatctggccaaggacgttgctggagctgag
gcccttctcgagagacaccaggaacataagggtgagatagatgctcgtgaggacagtttt
cgatcggctatggagtctggtaacagacttgttgataccaaccattatgctgctgatgaa
gtcagagaaaagctgcaaacactgtcaacagagaagaacagtttgctggagatgtgggaa
gagcgtcgtatcctgtatgaacagtgtatggatctacaactctttatcagggacaccgaa
caagctgatgcctggatgaccaaacaggaggctttcctggccaatgaagacctgggtgac
tctctagacagtgtagaggctctgtttaagaagcacgatgactttgagaagtccctggca
gcccaggaagagaagatcaaggccctggatgagtttgctactaaactgattgagaatgag
cactatgcagctgatgatgttgcagcaagacgtgatcagttattaacgaggaggaatcgt
ctctatgaagcatcacaactgaggcgccacctgttggaggagtcctacaagttccagact
ttccagagagattgtgacgagaccaagagctggatcaacgaaaaactcaagacagcctct
gatgagaactacctggacccaaccaaccttcagacaaaggtacagaagcaccagaacttt
gaggctgagatcgaagccaacaagaacagaatagaggccatctcaacatcaggtgaacaa
ctactggcagaggaacactacgcttcagacaccatcagagaaagaattgatgagattctt
gaactgtgggaaaatctccagagacagacagaattcaagggtaacaaactaaaggaggca
agtcaacagcagcagttcaaccgtaacgtagaggacatcgagacatggctgtcagaaatc
gagggacagcttatgtctgaggattatggcaagcttctacggcgacatggaactctatat
tctgttcatatggacttgaccagtgtacagaacctgcagaagaagcatgctctactcgag
gctgatgttgctgctcaccaggaccgtattgaaggtattgcagtacaggcccagtcattt
gttgactcgggacatttcgattcggaaaatatccaagccaaacagacacagcttcttaac
agatacaaggctctaaaggagccaatggctgcccggcaccagaaattggaggatgcactc
cgtctacagcagttcctgagagatgtagaggatgaggaagactggattagagagaaagaa
cccatagctgcatctacaaacagaggtcgtgatttgattggtgtacaaaacttgatgaag
aaacaccaggcccttcaagcggagctggcaggacatgagccaaggattaacaacgttagc
cagcagggaacagacatgattaaagatggtcactttgctgcagatgagattcaaggcaag
atcagtgatctggaagacagatggcaagctcttaaggacaaggcatcacagcgtaaacaa
gacctggaggactccttacaggcccagcagtactttgctgatgctaacgaggccgagtcc
tggatgagagagaaagagccgattgcctctaacaccgactatggtaaagacgaagactct
gctgaggccttgctgaagaaacatgaagctttcctgtcagatctcgaggcatacagcact
gtgattgaaggactgcatgatcaggcacaggcctgtaagcaacaagaggctccagtgata
gatgacctgggtacagagaaggtaatggctctgtatgactacacggagaaatctccacga
gaaacttccatgaagaaaggggatgtcctcacattgcttaacagcaccaacaaggactgg
tggaaagttgaggtaaatgatcgtcaaggttttgtaccagctgcctatgttaagaaactg
gacccaagcctgtcagccagccgtaacaacctgatggacgaatttaccatctctgtaaga
cagaaccaaattgagactcagtatgctaacctgcttgacctgggtaaccagcgtcgtgag
aaaatccaggagtcctgcaaagcataccagttggtgagagaggcagcagaactggctgca
tggattactgagaaagaaggtattatggtagctgagaatgttggagatgatctggaacaa
gttgaggagatgcagaagaagtttgatgacttcagaaaggatttgagaaccaatgaagct
aggctacaggagctgaacagtattgcagacagactgacagccatgggacagaccgaggca
gctgagaagatcagagagcaaatagcaacattgaacacaagatgggcaacactacaacag
gttacagcagacagagcccaaacactgggcagtgcccatgaagttcagagattccacaga
gatgtagatgaaactaaagactggataaatgagaagaaccaggcgctcaacaacgataac
tacggtcatgatctagccagtgtgcaggccctgcagcgtaaacatgagggactcgagaga
gatcttgctgcccttggggagaaggtacgagacttggatgagtctgcgaaacgtttgatg
atgacccacccagatcagggagaacagatctatgagcatcagacagaaatcaacgagatg
tggaatgaacttactgcaaaggctgacggccgcaaagccaaactgttagacagttacgat
cttcagcgtttcctgagtgactaccgtgacttgacttcctggatcaacagtatgatggct
cttgtctcctctgacgagctcgccaaggacgtcacaggggctgaagctcttttagaacgt
catcaggacttaggacatccccctccatcgtgcgagaatatcgaaaagcttatggcgtcc
tcaaccgaacctactgtcaatttgcagatgttcagttcggagatagtgagccactatggt
ataactcagctgcctccccaagctgagggtgaagagtccgaagtcgaggatgaggaacat
cgcactgaaatcgatgcaaggtctggtacgttccaggcatttgagacgtttggtcaacag
ttgttacacaatagccactatgccagcgaggatgtcaagaccaggcttgaagaactggcc
gtagcccgtgaagaacttgagcaggcatggattcagagacgtatgaagcttgaccagtgt
ttggaactacagttgttctacagagactgcgagcaggcagagtactggatggcatcaaga
gaggctttcttgtctggcgaccaagtggatggagataacgtagagtctttgatcaagaaa
cacgaggactttgatagagctatcagtagtcagcaagagaagattcaggcactgcaggta
tttgctgatcagctgattggaggagagcactatgatgctcaggccattgaagacaaacgt
gactcagtccttgacagatggaccaacttgaaggatgctctgatagacaaccgatcgaag
cttggcgaggctcaaactctgcagcagttctcccgagatgctgatgagatggagaactgg
ttacaggagaaactccaaattgctagtgacgagtcttacaaagaccctgctaacatacag
agcaagcaccagaaacatcaaggatttgaagcagaacttgctgctaatgctgacagacta
caggctctattagctactggacaagctttgattgatcagaagcagtgtgccggttctgag
gaagctgtacaggcacgtctagaaagtctcgcctcccagtgggagaccctggtggccaag
tcagcagagaagagcgacaaactaaaggaggcaagccgacaacagacctacaatgctggt
gtcaaggacatagaattctggcttggagaggttgaacaaatgctggcatccgaggagtac
ggcaaggatcttgcctcggttcagaatctgtcgaagaaacaccaactgcttgaggcagat
attgctgcacatgaggaccgcatcaaggacctgaactcccaggctgatcagtttatagat
agcggtgtctgggacgctgagagcattgaggtcaggaaaagaaccatcaacgaaagatat
gaaaagatcaaagagttggcaattgtacgtaagacaaggttgaatgaagccaacaccatg
caccagttcctacgtgacattgatgatgaagaggcctggatcaattttccaggtcattta
atagaaccctcaggggagaagaaattgcttgtaggctctgaggactatgggaaggatttg
actggagtacagaatctccgtaagaaacataaacgtctagatgctgagctcacaagccac
gaaccagctattcaggctgtgcaggagacgggagccaaattgattggcgaatctgacatc
aacactgatgatatacagaacagactggaacaacttgccaagagctgggatgagctcaaa
cagatggcagaaagaagaggccagatgttggaagaatcgtacgcattccagcagttcagc
gccaacgttgatgaggaagaagcttggatatcagagaaacaacgtctcctatctggtggt
gaccttggtgacacaatggctgctgtacagggcctgctgaagaaacatgaagtgtttgag
acagatttccaggtacatagggaaagatgtcaggaggtacagaaagaaggagagaaactt
attcaagagggcaaccataacaaggacagtatctctcagcgtaaccagggactacaggac
aagttatctgctcttgatgaagccgcagccctccgcaaagctggtttgattgacaactct
gctttcctgcagtttatctggaagactgatgttgtggaaagctggatcgccgacaaagag
aaccaagttcgctccgacgactatggtcgtgacctctcatccgtacaaacccttctcacc
aaacaggacactttcgatgctggattacaagcatttgagaaggaagggatacagactata
actgcgctgaaagatcagctgattgcatctaaacatgctcagacacctgccattgagaaa
agatacaatgatgtaatgacaagatggcagaacctattgtctgactccgagcagcgtaaa
cagacattgctgcgtctgcaagatcagtacaggcagatagaagacctctacctagctttc
gctaagaaagcctcggccttcaactcttggtttgagaacgccgaggaagacttgaccgac
cctgtaagatgtaattcggtagaggaaatacgacatctgcgcgagaatcatgagcagttc
aaggcctcgctgtcagctgcacaggctgacttcaaccaactagctgcccttgacaaagag
atcaagagcttcaatgtaggaccaaatccctacacctggtttacaatggaggccttgcag
gatacctggaataacctgcagaaaatcattaaggagagggacgtggacttggctaatgaa
cagcagagacaggaggagaatgatcagctacgtaaacagtttgcccaggctgctaacgct
ttccatgcttggctcacagaaactaggatgtggctgttggatggaggggcatctatgatg
gaaggttctggcacactggaggatcagctggaagctacaaagaaaaaggcagtggaagtg
agatcacagaagggacaattgaagcgtattgaagatcttggtgcggccatggaggaacgg
ctcattcttgacaataggtacacagaacatagtacagttggtttagctcagcagtgggat
cagctggaccagcttggtatgagaatgcagcataatcttgaacaacagatccaggctcgt
aacagaagtggcgtgtccgaggacgccctgcgtgagttcagcatgatgttcaaacatttt
gacaaagacaagtctggtaaattagatcaccaggaattcaagtcttgtctccgagccctc
ggctacgatcttccagtggtggaggacggacaggtggacccagagttccaggcaatcctc
gacatggtcgatcctaacagggatgggcatgtgtcactacaggagtacatggcatttatg
attagccgagagacagagaacgtccagtcgagctcggaagtggaacaagctttccgagct
ctaacttctggagaaaaaccatttattacatcacaagagctgtatgctaaccttacaaag
gaacaagcggattattgtatagggcgtatgaaaccgtatgtggatcggacaggacgcacc
ataccagacgcatatgactacgctgattttacccagtccatgtttgtcaactag
DBGET
integrated database retrieval system
