Mercenaria mercenaria (northern quahog): 123548534
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Entry
123548534 CDS
T07835
Name
(RefSeq) trafficking protein particle complex subunit 8-like isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123548534
Membrane trafficking [BR:
mmer04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
123548534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
DUF3335
SNAP
Motif
Other DBs
NCBI-GeneID:
123548534
NCBI-ProteinID:
XP_045191788
EnsemblRapid:
LOC123548534
LinkDB
All DBs
Position
6:66663238..66710363
Genome browser
AA seq
1491 aa
AA seq
DB search
MAQHKQTAHEFIQSTFSPQIAVLCSNDAELLCQKNNLSFVQLVQPFCRLKTEAHIKDPNN
VQHNVQHLRIGMVDMNCQIPPAAAAKKLMNDAVNSEQQQLVEGSRGNVITVGDYDLQLSS
ATPWFEAYRECFLQTLPPSDHEFLKHCLACIFVVSSNHTDPLAMLQTLSSSQQQQQSQFP
NKLPHWFCPNILKYYVLVHDVVEAEASKAEAVYQSMKSSFGHQSCHLLQINSRSLTTVET
MKTDASYPDPWGQFLNRTTEVGKKPQKAKYFIPWEGVDYDAGGSSGADDSMFPSRLEEGT
PDTTNHILDTNSHQDEGVDGLDSVNNSVLDHPLAVSDESPLQSPTLGYSSDYQGSTSSLN
SIQSAMSKSSSFNMQDKGRYPGHGMCLTASDQDRIRIFIHEFAVRALIPWAERQMRTLND
MLMSRTGLRKSLFGTAKKLFGGNPSKTSQAANTATTVVYSKDAPELQMRRLADLAFLFQL
YDFAYQTYHTAKRDFNNDNAWLHFAGALEMASLAIFMQGNQSQRAYPDHYMESAITTYLQ
SCKNIPYAVRATLVSTEALKNRGKYKEAAMQFIKMMSEESDLRSALLLEQAAHCFINMRN
SMVRKYSFHMILAGHRFSKAGQRKHALRAYSQALQIYKGKGWSLAEDHINFTIGRQSHNL
KQLENATAAFKHLLTEDSKQTAMQQNAFLREYLFVYRQLLVQESEETGLQSNTLPELPLP
VLDSNATKVLLGSRPQRPQGDKMYATGVWFDESDTGSWRWRKLEELLVLDANGGSLPLLY
RPSLQLYTDGTDNKFSPVSFMKEAITIELYLVNPLKVALTLTDVMLLWSFLPNICSHEKP
QLITNEQMVTAKNNLADEIVHGQVVKEIVLQGNDRLPVQMTLTPQQMGELRIYGITYNLG
SASTTFMAPSQGPSGPLGGAVMGSKASYVSTVYVRGKQKIEVQGPRLNNKKEEMASKVYG
PDRRLDLTIHEQMPLLEVSFVDFPKTLLCGEVHPVTVYFTNKGSSPLHKLKVASSNPKCF
VIGQNIDKQHSNSVYDMTDTSSDSISVNCDVSVKRVIDIEIPEGTLHSNSTMSIQLWIRG
NDIGGNHQVDFLFYYELAENPQKPKYRLLRHSVLVNTVESLSVRAVAQKACRHSKELSSK
GQFLISCEMENLSQQQSGRAHVSEIRVQQISCASKRWTIHSLTSHSEKETCMGSRELLQV
CLKASLLKKENPSNCDVTFTDLTLHGKKILSGKTPCLDFYERARVKLKQLDEESSQAQTP
SQMPPSKDRGDQFESLNSAIQLGMSLIILWQAHVVDGDGMERVCVGQHHVTVEKPDSIFT
SYPYILAPKESGPVRFVKEEVAEEEKKPDFEVLTQLVSYSLQHQTEINNCFHKCRLCCVH
VTLVLHNEADADVTVLVDTSKAQLRLNEYPDTGQTAESPAGGFSWTSQTLKQFKLSSKQT
ERISLSVSFSKPGVYNINNLAVFVSYQHDTAEMTLQKQTKPSVITIRDVPS
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacacaaacaaacagcccatgaatttattcagagcacatttagtcctcagatt
gctgtgctgtgcagtaacgatgcagaattgttatgtcagaaaaacaacctgtcatttgtc
caacttgttcagccgttttgtcgactgaagacagaggctcacatcaaagacccaaacaat
gtgcaacacaatgtgcagcatctacggattggaatggtggacatgaattgtcagataccc
ccagcagctgctgccaagaagttgatgaatgatgccgtcaacagtgaacaacagcagctg
gtcgaagggtctaggggaaacgtcataactgttggggactatgatcttcagcttagctct
gccacaccttggtttgaagcttacagagaatgttttctgcagacgttgcctccatcagat
catgagtttctcaaacattgtcttgcatgtatatttgttgtgtcttccaatcacacagat
cctctagctatgttacagacgttatctagcagtcaacagcaacaacagtcacagttccca
aacaagttaccacactggttctgtccaaacattctcaaatattacgtacttgtacatgat
gttgtggaagctgaagcctcaaaagctgaagcagtttatcaaagtatgaagtcttcgttt
ggccatcaaagttgccatttactacagattaactcccggtcgctaacaacagtagaaact
atgaaaacagatgcgagttatccagatccctggggacaatttcttaatagaactactgaa
gttgggaaaaagcctcaaaaggctaaatatttcataccgtgggaaggtgttgattatgat
gctggtgggagcagtggggcagatgattccatgtttcctagtagactggaagaaggcacg
ccagacacaactaaccatatactggacactaattcacatcaagatgaaggtgtagatgga
ttggattcagtgaacaattcagtgctggaccatcctttggctgtatcagatgaaagccca
ctacagagcccaacccttgggtatagttcagactaccagggttccaccagcagtcttaac
agcatacagtctgccatgtcaaaatcttcatcattcaatatgcaagacaaaggtcgatat
ccagggcacggaatgtgtcttacggccagtgatcaggaccgaatcaggatatttatacac
gagtttgcagtccgagcactgataccctgggcagaaaggcaaatgagaactctgaatgat
atgctaatgtcaaggacgggattaaggaagtcactgtttggtactgcaaaaaaactgttt
ggaggaaacccaagcaaaacaagtcaggcagctaacacagctaccactgtcgtgtattct
aaagatgccccagagttacagatgcggagattagcggaccttgccttcctgttccagcta
tatgactttgcctatcagacgtaccacactgcaaaacgagactttaataatgataatgca
tggttacactttgctggtgcactggagatggcatcattggcaatattcatgcagggcaat
cagagtcagagggcatatcctgatcactacatggagtcagccatcactacatatttacag
tcctgcaagaacattccatacgcagtacgggcaacacttgttagtaccgaggcattaaaa
aatcgtgggaagtacaaggaagctgccatgcagttcattaaaatgatgagcgaggagtct
gatttacggagtgccctgttgttggaacaggcagctcactgttttatcaacatgagaaat
tcgatggttcgtaaatattccttccatatgatccttgccgggcacagatttagtaaagca
ggacagaggaagcatgcattgagggcatacagtcaagctttacagatatacaagggtaaa
ggatggtccctagcagaggaccacatcaacttcactataggtcgacaatcacacaacttg
aagcagcttgagaatgctacagcagccttcaaacatctcctcacagaggacagtaaacaa
acagctatgcagcaaaacgctttcctcagagaatatctctttgtttataggcaactttta
gtacaagagtctgaggagacaggtcttcaatcaaatactctaccagaactacccctccct
gtacttgacagtaatgctacaaaagtcttactaggatctcgaccacaacggccacaaggt
gataagatgtatgcgacaggtgtttggtttgatgagtcagacacaggcagttggagatgg
aggaaactggaagagttactggtcttggatgctaatggtggttctctccccttactgtac
agaccatcattacagctctatactgatggaactgataataagttcagtcctgtttctttt
atgaaagaggcgataaccatagagttatacctggtaaatcctctcaaagtggccttgacc
ttgacagatgtgatgttgctatggagcttcttaccaaatatttgcagtcatgagaaacct
cagctgatcacaaatgaacagatggtcacagctaaaaataatttggcagatgagatcgta
catggtcaggttgtcaaggagattgtattgcagggaaatgacaggctgccagtacaaatg
acattaactcctcagcaaatgggagagttaagaatttacggaatcacgtacaatcttgga
agtgcttcaacaacgttcatggctccatcccagggtccctctgggccactaggaggtgcg
gtaatgggttcgaaagctagctatgtgagcacagtatatgtgcgaggtaaacagaagatt
gaggtgcaaggaccaaggttaaataacaagaaagaggagatggcaagtaaagtgtatgga
ccagacagaaggctggatcttacaatacatgaacagatgccattgctggaggtgagcttt
gtggattttccaaagacattactatgtggtgaagttcatccagtgactgtttattttaca
aacaagggctcaagcccgctacacaaacttaaagttgcttccagcaatccaaaatgtttt
gtaataggccagaatatagataaacaacattccaatagtgtttatgacatgacggatact
agctcagattccattagtgttaactgtgatgttagtgtaaaacgtgtgattgatatagaa
ataccagaggggactttacattccaattcaacaatgagcattcagctgtggatacgaggg
aacgatattgggggtaaccatcaagtggactttttgttttattatgaactggcagaaaat
ccacaaaaaccaaagtacagattattacgacacagtgttctagtcaatacagtggaatca
ttgagtgttcgtgcagttgctcagaaagcttgtaggcattctaaagagttatccagcaag
ggacaattcctcatctcttgtgaaatggaaaatttgagccagcaacagtcaggccgagcc
catgtcagtgagattagagtacagcagatatcctgtgccagcaaaagatggaccatacac
agtcttacatcacactcggagaaagagacatgtatgggcagtagagagctgttacaagtt
tgtttaaaggccagtctactcaagaaagagaatccttcaaattgtgatgttacttttact
gatctaactcttcatggcaaaaagatactcagtgggaagactccatgtctagatttttat
gagagggcaagagtgaaactaaaacagttagatgaggaatcttcacaagcacaaacccct
tcccagatgccaccttcaaaagacagaggagatcagtttgaatcactcaatagtgcaata
cagctaggaatgtctctcatcatattatggcaggcccatgttgtagatggagatggtatg
gagagagtttgtgtaggacaacatcatgttacagtggaaaaacctgacagcatttttaca
tcgtatccatatatcttggcgccaaaggagagtggtccagtgcggtttgtgaaagaagaa
gtcgcagaggaggagaagaagcccgactttgaagttttaactcaacttgtttcctatagt
ttacaacaccagactgaaatcaacaactgttttcacaagtgcaggttatgttgtgtacat
gtaactttagtgttacacaatgaagcagatgctgatgtgactgtgttagtcgacacaagt
aaagcccagcttagattgaatgaatatccagatacgggacagacagcagagagtccagcc
ggcggattttcctggacgagtcaaactttgaagcagtttaaactgtcatcaaaacagact
gagaggatatcactatcagtgtcgttcagcaagccgggagtgtacaatatcaacaactta
gctgtatttgtgtcataccaacatgacactgccgaaatgacactacaaaaacaaacaaaa
cccagtgtgatcacaatacgagatgtaccttcctga
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integrated database retrieval system
