KEGG   Mercenaria mercenaria (northern quahog): 123548711
Entry
123548711         CDS       T07835                                 
Name
(RefSeq) nibrin-like
  KO
K10867  nibrin
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    123548711
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmer03032]
    123548711
   03400 DNA repair and recombination proteins [BR:mmer03400]
    123548711
DNA replication proteins [BR:mmer03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    123548711
DNA repair and recombination proteins [BR:mmer03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     123548711
    BRCA1-C complex
     123548711
SSDB
Motif
Pfam: NIBRIN_BRCT_II Nbs1_C FHA RTT107_BRCT_5 Yop-YscD_cpl Peptidase_C25
Other DBs
NCBI-GeneID: 123548711
NCBI-ProteinID: XP_045192150
LinkDB
Position
6:62583349..62641856
AA seq 781 aa
MFYLISSVNPDQRYVVLGGKGYIVGRRDCDILLPGDPTVSRKHAELTVSHTEANLTNITR
LPILKLKDISKFGTWVNGERVEGERILKDGDSVHFGSQKSAFMVVYEPLVLTASCLDAAV
KKTVRQYMCTLGGHMISEWQKDCSLLVMSKISVTIKVISALVSQKFIVTPQYLEAFKKHL
QGSGEKPDPSKFTPELAETQLDGSEVSFNPDSRRKTLFEGMTFYFLSPKQLKKMNVAIEL
AGGMPLLLDKGKIDKNILKTKSVVMNCTDTELTQSSDSWVSDVQKLLDKHNKHMIADAEI
GFAVLYCSTEKHCNPDYISDADISRLPSQSLSQVEPFVADTETHDRSQKDSRSQRRGTKK
DTQTVIDETKFGDDTGRTQTPRTMQVDHASRTQTQRASQKPQVTQSEKSPVVPVVKMKDD
QSTPTHTRSSKKRNRMEDEELEITEVISKRVKAEPITPSKSPGIQSSAPKTKDDKSNTSK
AEDAEFVWDSDDDIDYTTIDTDVSVKHNEQKTSPGHNRKKSPVPEGRQNKGHRNKSRSRS
KSPAPRSRSPAPKLRSPAKKDVKIEPLSPNPKINSKPNRKGCDSKNDKGQTEVKVENEPL
RPTQSRPEVIDAQNTLPERRIKEEEEEVMLYDRKSGISQAEVPHGFLTTRKPIKDQVQRR
RDFEEEKDVPVGCMHVETVSLIARRPARKEKGAGDCPEGFTRWKGKVVRNYKKFKKTDHA
GSQGLPNIIGGSDLEVHVAKRSKELDDWFRESVQAETEHNAEERRAQELFDFDPSARRRG
R
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgttttatctaatatcaagtgttaaccctgatcagagatatgtggtacttggtgggaaa
ggttacattgtgggtcgtcgagactgtgacatcttgctacctggtgatccaacagtgagc
cggaaacatgccgagctgacagtgtcacacacagaggcaaatcttacaaatataactagg
ttgccaattctaaaactgaaagatatatccaagtttggaacatgggtgaatggagagcgt
gtggaaggtgaaaggatactaaaagatggtgactctgttcattttggatctcagaaatca
gcattcatggtggtgtatgaacctttagtactaacagcatcatgccttgatgctgcagtc
aagaagacagtgaggcagtacatgtgtactctaggtggtcacatgatcagtgaatggcag
aaagactgctccttgcttgtcatgagtaaaatcagtgtcactatcaaggttatcagtgca
ttggtatcacagaagttcatagtgacaccacagtatttagaagcattcaaaaaacatctg
caaggttcaggagaaaaaccggaccctagcaaatttacgcctgaattagcagagactcag
ttagatggaagtgaagtttcatttaacccagacagtcggaggaagacattgtttgaaggc
atgactttctacttcttgagtccaaaacagttgaagaaaatgaatgttgcgatagaactt
gctggaggaatgccattgttgctggacaaggggaaaatcgacaaaaatattttgaaaaca
aaatctgttgtaatgaactgtacagacacagagttgacacagtcatctgatagttgggtc
tctgatgtacagaagctcttagacaaacataacaagcacatgatagccgatgctgagata
ggttttgcagtgttatattgttccacagagaaacattgcaacccagattatatttcagat
gctgatatatctcgactaccatcacagagcctttctcaagttgaaccatttgtagcagat
acagaaactcacgacagatcccagaaagattctagaagtcagagaagaggaacaaagaag
gatactcagacagttatagatgagacaaagtttggtgatgatacaggaagaacacagacc
cctagaaccatgcaggtagaccacgcctctaggacacagactcagagggccagccagaag
ccgcaagttacacaaagtgagaagtctccagtggttcctgtggttaaaatgaaagatgat
cagagtacaccaacacacacacgatcatcaaagaaaaggaatagaatggaagatgaggaa
ttggagataactgaagtaataagcaaaagagtgaaagctgagccaataacaccctccaaa
tccccaggtattcaatcaagtgcaccaaaaacaaaagacgataaatcaaacacatccaaa
gcagaagatgcagaatttgtttgggatagtgatgacgacattgattacactacaatagac
acagatgtatccgtgaaacacaatgaacaaaaaacatcaccaggacataatcggaagaag
tcacctgttcctgaaggcagacagaacaaaggtcatagaaacaaaagtagatcaagatca
aagtctccagctccaaggtcaaggtcacctgctccaaagttaaggtcacctgctaagaaa
gatgtaaaaatagaaccattatcacctaatccaaagataaattccaagccaaacaggaaa
ggttgtgactccaaaaatgacaaaggtcagacagaagtaaaagttgaaaatgaaccactt
cgtccaactcagagtagaccagaagttatagatgctcaaaatacactgcctgaaaggaga
ataaaggaggaggaggaggaggttatgttgtatgatcgtaagtccggcatcagtcaagct
gaagtaccacatggtttccttactaccagaaaaccaatcaaggatcaagtacaaagacgt
cgtgattttgaagaagagaaggatgtacctgtaggctgtatgcacgtggagacagtgagt
ctgattgcacgtaggccagcaagaaaagagaaaggagcaggggattgtccagagggattc
actaggtggaagggaaaagttgtacgcaactacaaaaaatttaaaaagactgatcatgct
ggttcccaggggttaccaaacattatagggggcagtgacctggaagttcatgttgctaaa
agatcaaaggaactagatgattggttcagggaatctgtacaggcagaaacagagcataat
gccgaggagagacgagctcaggaattgtttgattttgacccaagtgcaaggagaagagga
cgatga

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