Mercenaria mercenaria (northern quahog): 123548801
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Entry
123548801 CDS
T07835
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123548801
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123548801
Spliceosome [BR:
mmer03041
]
Complex C
Other components
Complex C specific factors
123548801
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
Cas3-like_C_2
AAA_19
AAA_22
ABC_tran
nSTAND3
AAA_7
Motif
Other DBs
NCBI-GeneID:
123548801
NCBI-ProteinID:
XP_045192280
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All DBs
Position
6:57740035..58019171
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AA seq
700 aa
AA seq
DB search
MLKKPKFWKPGETAPGQSLEEERKSERESDSQVAVYNPNVSLSIEQQRQKLPIFKVRNRI
LYLVEKYQTVVIVGSTGCGKSTQIPQYLLEARWCEEGHLIGVTQPRRVAAITVAGRIAEE
RGTLLGGEIGYLIRFDDCCDETTRVKCMTDGMLIREIMKDPLLSKYSVLMLDEVHERTLY
TDIILGLVRKIQQKREDLRVIVASATLDAEEIKDFFNRNETEDESLDKAAILSIEGRAFP
VDIHYTIDPVPDYIKATVDTIVKLHRNEKQGDVLAFLTGMEEVNTVTKMLIEEAKQVLKQ
KDAVRMKIVPMHGSLPAAEQMKAFERTPKNCRKIVVATNIAETSITINGIVYIVDCGFVK
IRTYHPKTGIESLVIVPVSQASADQRAGRAGRVRAGKAYRLYTEADYDKLSEATVPEMQR
SDLAPVILQLKALGIANVLRFHFLSAPPAQNMVRGLELLYALGALDDSGNLTSPLGLRMA
EFPLTPMFAKMLLVSGEFGCSEEAVIIAAMSQIQNVFVTPTGEKRTADRMRRKFSVEEGD
HVSLVNVYRAFIKYGKSSKWCHENLLNFKGLVRATEIREQLLRMIKKFNIPIISCEENIE
PLCKCITAGFFANAAKLDPQGGYRTVRDDHTLYIHPTSVLYIEHPPKWVVFNEVVQTTKD
YMRDVTVINPDWLCELAPDFYQFGTEREIAAKRARHDDLG
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagaaaccaaagttctggaagccaggagagacagctccaggtcagagtttggag
gaggagagaaaatcagagcgggaaagtgacagtcaagttgctgtgtataatccaaatgtt
tcactctcaattgaacaacagagacaaaaactacctattttcaaggtgaggaaccgcatc
ttgtaccttgttgagaaatatcagacagtggttattgttggatctacaggctgtggcaaa
agcacacagattcctcagtatctattagaggctcgttggtgtgaagagggtcatttaatt
ggagtgacacaacctaggagagtggcagctattacagttgcaggcagaatagcagaagag
cgtggaacattactgggtggggaaattggctatctcatcagatttgatgactgttgtgat
gaaacaacaagggtcaagtgtatgacagatgggatgttaatccgagagataatgaaagat
ccattgttatcaaaatacagtgttctgatgttggatgaggttcatgagaggacactatat
acagacatcattctgggccttgtgagaaagattcagcagaaaagggaagatttgcgtgtg
attgttgcatcagccacattggatgcagaggagattaaagatttcttcaacagaaatgaa
acagaagatgaaagtcttgataaagcagctatactgagcatagaggggagagcttttcct
gttgacattcattataccatagatcctgtaccagattatattaaagcaactgtagatacc
atagtgaagctgcatcgcaatgagaaacagggagacgtcctagcttttctcactggcatg
gaagaagtaaacacagtcacaaaaatgctgatagaagaagctaaacaagtattgaaacag
aaagatgcagtgagaatgaaaatagtccccatgcatggaagcttgcctgctgcagaacaa
atgaaagcatttgaaaggacaccaaagaattgcagaaaaatcgtggttgctacgaacata
gcggaaacttctatcacaataaatggcattgtgtacatcgttgactgtggctttgtgaag
ataaggacatatcatcccaaaacaggaattgaatctttagtcatagtaccagtgtcacag
gcttcagctgatcagagagctggtagagcaggacgtgtcagagcagggaaagcatataga
ctgtatacagaagcagattatgataagctgtctgaggcaaccgtcccggagatgcaacgt
tcggaccttgctccagtcatactacaactcaaagctcttggtattgccaatgtgctcagg
tttcatttcttatctgcacctcctgcacagaacatggttagaggccttgaacttctctat
gcccttggagctctagatgacagtggaaatcttacatctcctctaggtctcagaatggca
gagtttccacttacacctatgtttgctaaaatgttgcttgtctcaggagaatttggttgt
tcagaggaagccgttataattgcagccatgtcacagatacagaatgtgtttgttacaccc
actggagagaaacgtacagctgatcgcatgagacgtaaattttcagttgaagaaggggac
catgtctcattagtgaatgtatacagggcttttataaagtatgggaagtcgtccaaatgg
tgtcatgagaatctgctaaactttaaaggccttgtgcgtgccacagagatccgagaacag
ctgttgaggatgataaaaaagttcaacatacccattatttcctgtgaagaaaacattgag
cctctgtgtaaatgtataacagcaggatttttcgccaatgcagccaagttagacccccaa
ggtggctataggacagtgcgagatgaccacaccctatatatacatccaacatcagtactg
tatatagagcatcctccaaaatgggttgttttcaatgaagttgtccagacaacaaaagat
tacatgagagatgtcacagttatcaatcctgactggttatgtgaacttgctccagatttc
taccagtttggaacagagagagaaatagcagcaaagagggcaagacatgatgatcttggc
tga
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