Mercenaria mercenaria (northern quahog): 123548820
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Entry
123548820 CDS
T07835
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 12-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123548820
Membrane trafficking [BR:
mmer04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
123548820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
K319L-like_PKD
PKD_4
PKD
Y_Y_Y
He_PIG
Motif
Other DBs
NCBI-GeneID:
123548820
NCBI-ProteinID:
XP_045192317
LinkDB
All DBs
Position
6:complement(56971488..57005833)
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AA seq
1006 aa
AA seq
DB search
MMILTSRKCLLVLVVLTGCLNICDTQDTDSCTNRKVIQLRNGYGHIESGNTKLHISSDCQ
LWSIQGDLNDTITVRISFAHFDKTACSAGANLILGPLPYLDICALHTQHFPVMYRSKRDH
MWIKYVASWGPLEGSDFALEYVMSSSKSCNFKCILDGGCILEEWQCNGEQECPYGEDEYA
CNDNTEVDEPPHAVTSPNAIIRHPQTTLTLSGDRSTDDHGIVTYTWTKSSTDRLSCDMIG
VHTSVLQLSNLEVGEYTFTLTVTDKLGQTSSSDVHVLVKPASYQKELRTTALSSRPTTAP
KPTCFRCYIKFYGQYGCLPSKLLCDGIIHCGDGMDEDRNICEKYRPTTRKPESTTCAYHE
IYCVVIEYNQLRCLHNMFKCDGKTDCVGGEDENPVMCGNSVCNKRLEDSVGWFASPSFPR
QYPQHSSCSWVIHKQASAVSSTIQLRRVSFSLEPERNTDYIKIYDGPDSTYKLIGTYYGR
SPPPDVIESSSNWLNVVFISDYFGEYGGFNFTYQIKGECLPSQNPCEGEYDCYDALHERC
NGIWNCPLKGSDEIGCGNCKGDYTCGLQTSQCYHPTERCNGLARCSNSFDEINCTSELCG
THNGTFLCDNKRCIYESWTCDERDDCGDNSDEQFCTGTTKRVIIAAICGSMICALLLVIL
LGCSCKLYSLRTMDHHYVYLXDPRHETTMSHLYAEFLRRRAPPPYHEAMLTSRNFDEVQQ
EYLERMRGSRRNHRGRGNRRRSRNQQTQSQTDNGDMVENQSNVNDENNENTHEGVSGMQL
CTINEENENENHVNSGRTSSTAELLPSDSESDLDSDESETDLAEQGEGYSEGENGNNNRN
VSRGDHDDDDVENILASTSLSAQWMRSADSEDSSDDVCILGNSSPENVETSDTINSRGQG
HGDNASIDTEATASIASIEHQEIHNTENLFKDSENESDTDDDALENSRNSTPKPDSNHGN
AVISDTNGDLIRRANSQGSLSSEGSETYSENDVPLLPMNSVVSQHF
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgatgattttaacaagcaggaagtgtctccttgttttggttgtgttgacaggttgtctt
aacatttgcgacacacaagacacagattcttgcaccaatagaaaagtgatccagttacga
aatggatacggccatattgaaagtggaaacacaaaactacatatttcttcagactgccag
ctgtggagcattcagggagatttaaatgataccattacagttaggatatcttttgctcac
tttgataagacagcatgttctgctggcgcaaacctgattctaggaccattgccatacctg
gacatttgtgcccttcatacacaacacttcccggtgatgtaccgctcaaagagggaccat
atgtggataaaatatgtagcttcatgggggccacttgaaggatcagattttgcgctggaa
tatgttatgagttcgagcaaaagttgcaattttaaatgcatactagatggggggtgtata
ctagaggaatggcagtgcaatggtgaacaagaatgtccttatggtgaagacgaatatgcg
tgtaatgataatacagaagtggatgagccaccacatgcagtaaccagtccaaatgcaatt
attcggcaccctcaaacaaccttaacactgtccggggacagaagtacggatgatcatgga
attgttacatatacatggacgaaatcaagtacagataggctctcatgtgatatgattggt
gtacatacttcagtgttacaactaagcaatctagaggttggagagtacactttcacttta
actgttacagataaactaggacagacgtcctcatcagatgtacatgttttagtaaaacca
gcatcctatcaaaaggaactgaggacaacagcactatcatcaaggccaacaacagcaccc
aagccaacatgtttccgttgttatattaagttttatggccaatacggctgtcttcctagt
aaactcctctgtgatggaattatacattgtggagatggcatggatgaagaccgcaacatt
tgtgagaagtataggccaacaaccaggaaacctgaatcaacaacctgtgcctatcatgag
atttattgtgttgtgattgagtacaatcaattgaggtgtcttcacaatatgtttaaatgt
gatggcaaaaccgactgtgttggcggtgaagatgaaaaccctgtcatgtgtgggaatagt
gtatgtaacaagcgtttagaagattcagttggttggtttgcatcaccaagttttcctcgg
caatatccacaacattcaagttgttcctgggttatacacaaacaggcttcagcagtaagc
tcaacaatacagctaaggagagtgtcattttccctagagcctgaacgaaacacagactat
atcaaaatttatgacgggccagacagcacttataagctgatcggaacttactatgggcgc
agtccaccaccagatgtaatagagagctcctcaaattggctaaatgttgtcttcataagt
gactacttcggagaatatggaggattcaattttacatatcaaattaaaggtgaatgtttg
ccgtctcagaatccatgtgagggagaatatgattgttacgatgcactacatgagcggtgt
aatggaatatggaattgtccattgaaaggttctgacgaaataggatgcggtaactgcaaa
ggtgactatacatgtggactacagaccagtcagtgctaccatcctaccgagagatgtaac
ggtcttgcaagatgttctaatagctttgatgaaattaattgtacatcagagttgtgtgga
actcacaatggaacgtttctgtgtgacaacaaacgttgtatctacgagtcctggacatgt
gatgagagagatgattgcggagacaacagtgatgaacagttttgtacaggaacaacaaaa
agagttattattgcagcaatttgtggctccatgatttgtgcgctattgcttgttatctta
ctgggctgttcatgcaagttgtactctctccgaaccatggatcaccattatgtgtaccta
nnagacccaagacacgagaccacgatgagccacctgtatgcagagtttctgagacgacgt
gctccaccgccatatcatgaagccatgcttacatctagaaattttgatgaagtacaacaa
gaatatttagaacgaatgagaggttctcgacgaaaccatagaggacgtggaaatagaagg
agatcgcgaaatcaacaaactcagtcacaaacagataatggtgacatggttgaaaaccag
tcaaatgtaaatgatgagaataatgaaaatacacatgaaggggtcagtggcatgcaactg
tgtacaataaatgaagagaatgaaaacgaaaaccatgtaaattctgggaggacttcgtcc
actgctgaactcctaccgtcggatagtgaatcagacttagattcagatgaaagtgagact
gaccttgctgagcaaggtgaaggttattctgaaggtgaaaacggaaacaacaacagaaat
gtaagcaggggtgatcatgatgatgatgatgttgaaaatatattagcatctaccagtctt
tcagcacagtggatgaggagtgcagatagcgaggactcatctgatgatgtatgtatcctt
ggaaacagctcaccagaaaatgtggagacctctgacacaataaactctagaggtcaaggt
catggtgataatgcaagtattgatactgaggcaactgcctctattgctagcattgaacat
caagaaattcacaatactgaaaacctgttcaaggatagtgaaaatgagtctgatacagat
gacgatgcactggaaaattccagaaattccacgccaaaaccagacagtaatcatggaaac
gctgtgatatcggatacaaatggtgacctaattaggcgagctaactcacaaggttctcta
agttctgaaggatctgaaacttacagtgagaatgatgtgcctttacttccaatgaattca
gttgtatctcaacacttctaa
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