Mercenaria mercenaria (northern quahog): 123548993
Help
Entry
123548993 CDS
T07835
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04137
Mitophagy - animal
mmer04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123548993
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123548993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123548993
Enzymes [BR:
mmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
123548993
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123548993
Multi subunit type E3
ERAD complex
123548993
LMBR1L-GP78-UBAC2 complex
123548993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
CUE
zf-C3HC4_3
zf-rbx1
zf-RING_11
G2BR
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
123548993
NCBI-ProteinID:
XP_053401749
LinkDB
All DBs
Position
6:complement(47405034..47426808)
Genome browser
AA seq
530 aa
AA seq
DB search
MNVQTMEEVVLWVAWFTVLGFFHLLTQLAKDRFEYVSFSPTTPHFIHIKLLSLLCVIVIS
CCGLLAVCTMVGLQMGLTIFAFMAAECMLLAIRTLYVVARYCLHLIDMNLEGVWENRATY
VYYTELIFELAALSIDFGHHLHMLLWGNIFLSMASLVICMQLRYLFYEFKRRIKRHKNYR
RVVKNMEERFSMATPEELNSNDDDCAVCWEKMETARKLPCGHLFHNSCLRSWLEQDTSCP
TCRLSLNERPTGVDPNGNIPDRPVHDHANIPPANQPGNMMTNHFFHFDGSRYVSWLPSFS
VEVTHTNMLANNRPTPAQTSQLDNMARQVLQVFPHMPLNVVMDDLRVTRSVDFTIENILE
GRLQAPPPGSMISRALEDEDSHSDDSENYQIGSARPDSMDPSVDFTEYFAIPNEMGDNNS
LDTSDRSESLAQFSGRFSKSANERESMLEDRKNRMLEQARRRFLANDNSSADSSEQTVSN
TQTDTLDSVTNQSSSGALHTNGPSGDSLRQRRELAYMAAARRQQEGRSDT
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtacagacaatggaggaagttgtattgtgggtggcttggtttacagtgctcggt
ttctttcatctacttacacagttagcaaaggatagatttgaatatgtatcattttctcca
accacaccacatttcatccatatcaagctgctgtcacttttgtgtgtaatagttatctca
tgttgtggactgttagcagtatgtaccatggttggacttcaaatgggtcttacaatcttt
gcttttatggctgctgagtgcatgttgttagctataaggaccctctatgtggttgcaagg
tattgcttgcacctgatagacatgaatttagagggtgtttgggagaacagagctacttat
gtgtactacacagaactcatctttgaacttgctgctctctccatagactttggacatcat
ttacatatgctgctgtggggtaacatattcctgagtatggccagtttggtgatatgtatg
caactgagatatctattctacgaattcaagaggagaatcaaacggcacaagaactacagg
agagtcgtgaaaaatatggaagagagattcagtatggctaccccggaggagctgaacagc
aatgatgatgattgtgctgtatgctgggagaaaatggaaacagcgagaaagttaccatgt
ggtcatctcttccacaattcctgtttgaggtcatggttagagcaggacacttcctgtccc
acttgtcgactgtctctgaatgaacgacccactggtgttgatccgaatggtaacataccc
gacaggccagtccatgatcatgccaatattcctcctgcaaatcaacctggcaacatgatg
accaaccacttcttccattttgatggatcacgatatgtgagttggttgccaagtttttca
gtggaagttacacataccaacatgcttgcaaacaacagacctacaccagcacagacttca
caactagataatatggcacggcaagttttacaggtgtttccacatatgccattgaatgta
gtaatggatgaccttcgtgttacaagatctgttgactttactattgaaaacattttggaa
ggcagacttcaggcaccacctcctggaagtatgatttcgcgagcacttgaagatgaagat
tcccattctgatgattcagaaaattaccagattggatcagccagacctgatagtatggat
ccttcagttgatttcacagaatattttgccattccaaatgaaatgggggacaacaattca
ttagatacatccgacagaagtgaaagtctggcacagtttagcggaaggttctcaaaatca
gcaaatgaaagagagtcaatgttggaggacagaaaaaacagaatgttggagcaagccaga
agacgattcttagccaatgataacagctctgcagattctagtgaacaaacagtttctaac
acacaaacagacactttagattcagttacaaatcagtctagttcaggtgctttacatact
aatggtccttctggtgacagcttgcgacagcgtcgagaacttgcttacatggcggcagca
cggcgtcagcaagaaggcagatcagatacctga
DBGET
integrated database retrieval system
