Mercenaria mercenaria (northern quahog): 123548997
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Entry
123548997 CDS
T07835
Name
(RefSeq) DDB1- and CUL4-associated factor 11-like isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123548997
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123548997
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Cytochrom_D1
Beta-prop_WDR90_POC16_2nd
Beta-prop_LRRK2
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
PROPPIN
PD40
PmrD
Motif
Other DBs
NCBI-GeneID:
123548997
NCBI-ProteinID:
XP_053401736
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Position
6:complement(47028969..47069529)
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AA seq
581 aa
AA seq
DB search
MGSINSSHRRRRMSSSLDLSSSQREDLATSQEGAEGGHGEDVPDTHVEEDAADSDNEHHD
LSSILAYLIRRCASCVSSGQVRILTSDDRGDSYSEDEDFCEEQRPPAVDPNPDTSRIQEN
DIYEEVLLKSGRSSAFDKSHHTVSHMLYKRQIGMGKQIKFGASDRRVISTPYLPNYCDTV
AHYRQKAFCGTYSVDGNIFLSASQDQNIRIYDTKEDRFDLLKTIRAKDVGWSVLDTAFSP
DGNYMIYSSWSECIHLCNVHGDQNVHQALHLFPTENSFCIFSLTFSSDNREILGGANDGH
LYVYDRDSNQRTLKIDAHDDDVNAVAFADTTSQILFSGGDDGLCKVWDRRTLKEDHPVPV
GTLAGHYDGITYIDPKGDARYLLSNSKDQTMKLWDIRMFSSATAIEQTKKAVSKQRWDYR
WQQVPRKMDKHRRLQGDTSVMTYKGHSVLHTLIRCHFSPEFTTGQRYVYTGCAMGNLIIY
DTLTGQVVRKLEGHRQCVRDVSWHPYENNIITTSWDGSLRKWEYKSVDKIEQEEERSSSE
SEEDLGGLFRRSRQIRKKCKKRQRQASWCQNADKKFRGLFD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgattaattcttcacaccgacggcgtagaatgagcagttccctagatctaagc
tcatcgcagcgtgaagatctagcaaccagtcaagaaggagcagaaggcgggcatggagaa
gatgttccagatacacatgtagaggaggacgcagctgatagtgataacgaacatcacgat
ttatcttccatcctggcgtatctaattagaagatgtgcttcttgtgtttccagcggccag
gtccggatcttgacgtccgacgacagaggggacagctactctgaggacgaagatttttgc
gaggaacagagaccccctgcagtggacccaaatccggacacgtccagaatccaggaaaat
gacatatacgaggaagtcctactcaagtctggtagaagcagtgcctttgataaatcccat
catacagtctctcatatgttatataagagacagattgggatgggaaaacagatcaagttt
ggagccagtgatcgaagagtgattagcactccatatttacccaattactgtgatactgta
gcccactacagacagaaggcattttgtggtacctactctgtagatggcaatatcttcctg
tcagcttctcaagatcagaatatcaggatttatgatacaaaagaagacagatttgatctc
ctgaaaactattagagccaaggatgttggctggagtgttctcgatacagcctttagtcct
gatggtaactacatgatatattcaagttggtctgaatgcatccacctgtgcaatgtacat
ggtgatcagaatgtgcaccaggcgttacatttgttccctacagaaaacagcttctgtatc
ttctctctgaccttctcctcagataacagagaaatcctcggcggagcaaatgatggacat
ctgtatgtgtacgacagggacagtaatcaacgaacacttaaaatagacgctcatgatgat
gatgtgaatgctgtagcgtttgcagacacaacatcacagatattgtttagtggaggagat
gacgggctatgcaaggtatgggacagacgaacgttaaaagaagatcatccggtccctgtg
ggaactttagcaggacactatgatggcattacgtatatagatcctaaaggagatgcaaga
taccttttgtcaaactccaaggatcagacaatgaaactgtgggatattcgaatgttttcg
tccgcaacagcaatagaacaaacaaagaaggctgtctccaagcaacgctgggattataga
tggcagcaggttccgaggaaaatggacaagcatcgtcgtttgcagggagacacctcagta
atgacatacaaaggtcattctgttctccatacgttgattcgctgtcacttttcacctgaa
ttcactacaggacagcgatatgtgtatacaggctgtgcaatgggaaacctgataatttat
gacacgctgactggacaggtagtaaggaaacttgaaggtcacaggcagtgtgtgagagat
gtctcctggcatccgtatgagaacaacattataacaacctcatgggatggttcgttacgt
aaatgggagtataaatcggtagacaaaatagaacaggaggaggaaagaagttcgtcagag
tcagaagaagaccttgggggacttttcagacgaagcagacaaattaggaaaaaatgtaag
aaaagacagaggcaggcaagttggtgtcaaaatgcagataaaaagtttcgaggtctgttt
gactga
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