Mercenaria mercenaria (northern quahog): 123549133
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Entry
123549133 CDS
T07835
Name
(RefSeq) phenylalanine--tRNA ligase, mitochondrial-like isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123549133
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mmer01007
]
123549133
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmer03016
]
123549133
Enzymes [BR:
mmer01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
123549133
Amino acid related enzymes [BR:
mmer01007
]
Aminoacyl-tRNA synthetase
Class II (U)
123549133
Transfer RNA biogenesis [BR:
mmer03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123549133
Prokaryotic type
123549133
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
tRNA-synt_2
Motif
Other DBs
NCBI-GeneID:
123549133
NCBI-ProteinID:
XP_045192910
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All DBs
Position
6:complement(41330440..41506491)
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AA seq
432 aa
AA seq
DB search
MRNLFKRYRLFSTFHSHWIAARCFCNEPATKDVTCVLGKRYPVDSWTNVSPSIIGKLGTN
LHTQKHHPLGLLKLQIQNFFYKTYVKRSGNPIFSVYDNISPVVTLEQNYDHLLVPKDHPS
RKWSDSYYINCCYMLRAHTTAHQHDLISSGLDSFLIVGDVYRRDTIDSTHYPAFHQLDGV
RLFSKHELFSNVDEIDSLHLFENGLKTDLKQGEHTLEAALVVSNQLKSTLQNLAKSLFGK
DIEYRWVEEYFPFTHPSWELEIMYKGKWMEVLGCGVIRQEILQKAGAVDKVGWAFGMGLE
RLAMKLYNISDIRLFWSKDPRFTNQFKVEDPSTQIKFKPLSKHPELKNDISFWIPANYEE
NNFYDLVRSVGGDLIENVELIDEFENKKSGKTSHCYRLIYRHMERPLTQDEVNLVHQKIA
TDATSNLGVVIR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatctcttcaaacgctatcggttgttttcaacattccacagtcactggattgca
gccaggtgtttttgcaatgaacctgctacaaaggatgtgacttgtgtcttgggtaaacgt
tatccagttgacagttggaccaatgtatctccatcaatcattggaaagttgggaaccaac
cttcacacccagaaacatcatcctttagggcttcttaaactccagatacagaacttcttt
tacaaaacttatgtgaaaagaagtggcaatccgattttctctgtttatgataacattagt
ccagttgtaactcttgaacaaaattatgaccatctattggtaccaaaagaccatcccagt
cgtaagtggtcagacagctactacataaattgttgctacatgttgagagcacacacaaca
gctcatcaacacgatctcatttcaagtggactagatagttttctgattgtgggtgatgta
tataggagggatacgatagattcaacacattatcctgctttccaccagttagatggagtt
aggcttttctccaaacatgagttgttctcaaatgtagatgagattgactctctgcatctg
tttgaaaatgggttgaagacagatttgaagcagggagaacatacattagaggcagcactt
gttgtaagcaaccagttgaaatctacgctacaaaatcttgctaaatcactgtttgggaaa
gatattgagtatcgttgggtagaggagtattttccattcacacatccttcctgggagctt
gaaattatgtataaaggcaagtggatggaagttttaggatgtggggtcatacgccaagag
attttacagaaagctggagcagtagacaaagtaggttgggcatttggtatgggattggag
cgtctggcgatgaagctgtacaacatttctgacatacgtttgttctggagcaaggaccca
agattcaccaaccaattcaaggtggaagatcccagtactcaaattaaattcaagccactc
agtaaacacccagaattgaaaaatgacatttcattttggattcctgccaattatgaggag
aacaatttctatgatcttgtacgttctgtaggaggagatcttatagaaaatgtagaactg
attgatgagtttgagaacaaaaaatctgggaaaacaagtcactgctacagattgatatac
agacatatggagagaccactgacacaggatgaagtcaatttagtgcaccagaaaatagca
acagatgctactagtaatcttggagtagtgattagataa
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