Mercenaria mercenaria (northern quahog): 123549392
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Entry
123549392 CDS
T07835
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123549392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123549392
03036 Chromosome and associated proteins [BR:
mmer03036
]
123549392
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123549392
Coactivators
SAGA/TFTC/STAGA complex
123549392
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
123549392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
AAA_lid_RFC1
Motif
Other DBs
NCBI-GeneID:
123549392
NCBI-ProteinID:
XP_045193372
LinkDB
All DBs
Position
6:complement(24190258..24234842)
Genome browser
AA seq
918 aa
AA seq
DB search
MADPNPLDSFLHSETDESVVNALVASLESRLASPTHKEQSPTIPNPSVNSNHVSNVSSIS
ACTSAQNNSVHLSNDTGNTINSNAKSVIKNENQILGINSIHTNSPVAHVNSPVNSHRTAS
PKPLNSVNKSSPAIQVITQPQNHGNHSVVANPHMNRATPSPSNVISVNNINVAQSNSNII
ITNPGVVQNNSALKHVNRTSLSPAPQQNSTGQIGGVQQSQPIVRNSQGVVINSNSQQLTQ
KTNVHIVHSANVTSVITQPGSNPSVITVRGQVPSSHITTVRPQVVTTHVSNSPSPRLQGS
VRIQNRMPNAPIRIASSQPNQQINIAPRPGSHPGTITLPPGIVPGQGAVLMKNEQGQIVI
VQPGSLPGQHPASSVTISSSSTPQKVQYVRHPNTGATQRLPNSQILTIQPGAQSQPQTVV
RQAVPAPVNASRIQPGIRVTMPGSMQTVVRTTAPGGTSTVGHSHGVSSGQQSAAAQAAQQ
QQMVENVKKCKNFLSTLIKLAASQPEATVSSVRDLIQGLIDGKLEPEVFTEKLQKELKSS
PQPYLVPFLKKSLPLLRQSLLNNKMTIDGVKPPPIEIVQQHQSASQVGHSSTHNQVIPKV
GGQFHPKPSVAQVTMVTGKPSMTKQMNMMQSNIPSTVKAFHSRVAGLTPSSSPGPSHSHK
DTKRVKESFKDDDDINDVATMGGVNLTEESRNILATNAEFIGTQIRSCKDEAFLAQGPLT
SRIHAIARRHGITEVPTEVANLVSHATQERLRHIVEKLSTIAEQRTEIYKMNEKFDSSLD
VRAQLKFLEELDVLERKRHDEQEKEMLRRAAKSRSKFEDPEHLKLKQRAKDLQAAEMEEV
RQREANLTALAAIGPRKKRKLDETSSGSSNIPNGSSSSNPRTALRPRIKRVNLRDLMFLM
EQDKTLNKSNTLYRTFLK
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcctaacccgctagattcatttttacattcagagacagatgagagcgttgtt
aacgcactagttgcttccttagagtcgagattagcttcccctacacataaagagcaatcc
cctacgataccaaatccgtccgttaacagtaatcatgttagcaatgtctcttcaatttca
gcatgtacaagtgctcaaaataattctgtgcatttatctaatgacactgggaatacaatt
aattctaatgcaaaatcggtgataaaaaatgaaaatcaaatattaggaattaattctatt
cataccaattcacctgttgcgcacgtaaattcacctgtaaactcgcatagaactgcatca
ccaaaacctttgaacagtgtaaacaaatcatctccagcaattcaagtgataacacaacca
cagaatcatggaaatcattcagtggtggctaacccacatatgaatcgagcaacaccatca
ccgtccaatgttatttcggtgaataatattaatgtagcgcaatctaattccaatattatt
attacaaatcctggagttgttcagaataacagtgcattaaaacatgttaatcggacttca
ctttcgcctgctcctcaacagaactccactggacaaattggtggtgtgcaacaaagtcaa
ccgatagtgaggaatagtcagggagttgtaattaattcaaattctcaacagttgacacaa
aaaacgaacgtgcatattgttcatagtgctaatgtgacttcagtgattactcagcctgga
tctaatcctagtgtgataactgtgcgtggacaagttccatcatctcatataacaactgtt
agacctcaagtagtgactacacatgtttcaaattctccatcaccgcgactgcaagggagt
gttaggattcaaaatagaatgccaaatgcaccaattcgaattgcatcatctcagccaaat
cagcagataaatattgctccaagaccaggatcacatcctggtacaattacattacctccg
ggaattgtaccaggacagggggcagtgctcatgaaaaatgagcaaggtcagattgtgata
gttcaacctggctcacttccgggacagcacccagcttcctcagttacgatctcaagcagt
tctacaccacagaaggttcagtatgttcggcatccaaatactggagcaacccagagatta
cctaacagccaaattttgaccatccagccaggggcacagtctcagcctcagacagtggtg
agacaggctgtccctgcccccgtaaatgcatctcgcatacaaccaggtattagggttaca
atgcccggaagtatgcagactgtagtaagaacaactgcaccaggaggtacaagcactgtt
ggtcattcacatggtgtatcctctggccaacagtcagcagctgctcaagctgcacaacaa
caacagatggtagaaaatgtaaagaaatgcaaaaactttctgtctactttaatcaagtta
gctgctagtcaacctgaggctactgtcagtagtgttcgagatctcatacaaggacttata
gatggaaagcttgagccagaagtttttacagagaaattacaaaaggagttgaaatcctca
ccacagccatatcttgtaccttttttaaagaaaagtttacctttactacgtcagtcattg
ttaaacaataagatgacaatagatggtgtaaagccgccacctatagaaattgtccagcag
catcagtcagcaagtcaggtgggacactcgtcaacacataatcaggttataccaaaggtt
ggaggtcagtttcatccaaagccaagtgtcgctcaggtaaccatggtaacagggaagcct
tcgatgaccaaacagatgaacatgatgcaaagcaatattccaagcacagtgaaagccttt
cattctagggtcgctggactcacaccaagctcaagtccgggaccatcacattcccacaaa
gacacaaaacgtgtgaaggaatcatttaaagatgatgatgacattaatgatgtagctacc
atgggtggggtaaaccttacagaagaaagcaggaacatccttgctactaatgctgaattt
ataggaactcaaatacgatcttgtaaagatgaagcttttctcgcccagggacctttaaca
agtagaattcatgcaatagcacgtagacatggtattacagaagtgcccactgaagtagcg
aacctggtatctcatgctactcaagaacgattgcggcatattgtagaaaaattatccacc
atagctgaacagcgaacagaaatatacaagatgaacgagaagtttgattcatctctagat
gtaagagctcagttaaagttcctggaagagcttgatgttctagaacgtaaacggcatgat
gaacaggagaaggagatgctgcgacgggcagcaaagagtcgttcaaagtttgaagatcct
gagcatcttaaactgaaacagagggccaaagacttacaagcagctgagatggaagaggtc
cgacaaagggaggcaaatcttacagctttggctgccattgggcctcgaaaaaagcggaaa
ctagatgaaacttcgagtggttctagtaacatacccaatggttcatcctcgtccaatcct
agaactgctttgcgaccaagaataaaaagagtcaacctcagggacctcatgttcttaatg
gaacaagataaaactctcaataaatcaaatacactgtacagaacgttcttgaaatga
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