Mercenaria mercenaria (northern quahog): 123549419
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Entry
123549419 CDS
T07835
Name
(RefSeq) AP-1 complex subunit gamma-1-like isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
123549419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123549419
Membrane trafficking [BR:
mmer04131
]
Endosome - Golgi transport
Others
AP-1 complex
123549419
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
SDG2_C
DUF5578
Motif
Other DBs
NCBI-GeneID:
123549419
NCBI-ProteinID:
XP_053401362
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All DBs
Position
6:22774013..22825994
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AA seq
843 aa
AA seq
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MIDEISGVIGYGFTNSSIMPTPKRLRDLIREIRSARTQADERGVVQKECAQIRDSFRETD
NTYRCRNVAKLLYIHMLGYPAHFGQLECLKLIASPKFTDKRIGYLGAMLLLDERQDIHLL
VTNSLKNDLGHQTQYIVSLALCTLGSICSAEMSRDLAGEVEKMIKSSNAYIKKKAILCAY
RIITKVPDLMEMYIPSTRALLNEKNHGVLLTAVCLITEMCEKSPDTLTHFRKTVPQLVRI
LKNLIMAGYSPEHDVSGVSDPFLQVKILRLLRILGKNDAEASETMNDILAQVATNTDTSK
NVGHAILYEIVLTIMGIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRVVSADYNA
VQRHRTTIVDCLKDTDISIRKRAMELSFALVNNNNIRGMMKELLSFLENCDPEFKSDVCS
NIVTATEKHSPNKRWHVDTVMKVLKIAGNYVHNDIVSIVIQLIASANQLHSYTVRQLFFL
MKEDNSQQPLCQVASWCVGEYGEQLLLPPSEEDDLGPVKEEDVVKVLQKGLENNNSTSVT
KEYCITALMKLSTRFSVTRDSILDITSRYSSSTQVELQQRAVEYTSIFRKYDHMRSALLE
QMPLMEINRTKDAIDGEESGESLLNTATVERNNIENIKAPTSTQTESQNILDLLDVGSSP
VIPTQPPVQPMKQEPVDLLSLLDDVATISSAPGITNAAPGVDNLMGDMLGSPVSNNLMNG
NSNVSAPIVAYNKNGLLIEFRCERENDSPTVSIINVKASNTSPTQMSDFVFQAAVPKSFQ
LQLQSPSGNILPPLNSGTVTQVIKINNPQKQSIRMRLKLSYTQNGNSVTEMGEVNNFPSE
LWQ
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgaaataagtggcgttattgggtatggatttactaattcatccatcatgccg
actccgaagcggctacgtgacctgattcgtgaaatcaggtcagcgcggactcaggcagac
gaaaggggtgtggtacagaaggaatgtgctcagataagagattcgttcagagaaacagac
aacacttacagatgtagaaatgttgccaagctgctttacattcatatgctgggataccct
gcacattttggacagctggaatgtttgaagttgatagcatcaccaaaattcacagacaag
agaataggttatcttggagcaatgttgttattggatgaaagacaggacatccatcttctt
gtgaccaactccctgaaaaatgacttgggtcatcagacacagtatattgtaagtcttgcc
ctgtgtacacttggttcgatatgctcagctgaaatgagtcgggatctggctggggaagtg
gagaaaatgatcaaatcgtctaatgcttacatcaagaagaaggcaatattgtgtgcatac
agaataatcacaaaggtaccagacttgatggagatgtatattccatctacacgggcatta
ctgaatgagaaaaatcacggtgtactattgactgcagtatgtttgatcacagaaatgtgt
gagaaaagtcccgataccctgacacactttagaaagactgtgccacagttggttcgtatc
ttgaagaatctgatcatggctgggtattctccagaacatgatgtttccggtgtcagtgat
cctttcttacaggtgaagattttgaggctgttgagaattctgggtaaaaacgatgctgaa
gcaagtgaaactatgaatgacattttagcgcaggtcgctacaaatacagataccagtaaa
aatgtgggtcatgcaattctgtatgaaattgttctcactattatgggtatcaagtcagaa
tcgggattgcgggtattagctgtgaatatattaggaagatttctactgaataatgataaa
aatattaggtatgttgctttaaacacattgttacgggtggtgagtgctgactacaatgcg
gtgcagcgtcacagaacaacaatagtagactgtttaaaagatacagacatctcaattaga
aaacgtgcaatggaactatcatttgctctggtcaacaacaacaacatcagaggtatgatg
aaagagttgttgtcattcctggaaaactgcgaccccgagttcaagtctgatgtctgctcc
aatattgtcactgcaacagaaaaacattccccaaataaaagatggcatgttgatacagtt
atgaaagtgttgaaaattgctggtaattatgttcacaatgacattgtgtcgatagtgata
cagctgatagctagcgcaaaccagttacactcgtacactgttcgtcaactgttcttcctg
atgaaggaggacaactctcagcaacctctgtgtcaggtcgcatcatggtgtgttggtgaa
tatggggagcagttgttacttcctccatcagaagaggatgacttagggcctgtaaaagaa
gaggatgtagtgaaagtcttacagaaaggtttagagaacaacaattccacttcagtcaca
aaggaatactgtattactgcattgatgaaacttagtacacggttctcagtcacaagggat
tcaatactggatataacatctcggtatagcagcagtactcaggtagagttgcaacagaga
gctgtggaatacacatctatatttagaaaatatgaccatatgagatctgctttgttagaa
caaatgcctttaatggaaattaacagaacgaaagatgcaattgatggtgaagaatctggg
gaatctttgctgaacacagcaactgtagaaaggaataacatagaaaatatcaaagcacca
acttctactcaaactgagagccagaatatactagatttgttagatgttggttcaagtccc
gttatacctacccagcctcctgtacagccaatgaaacaagaaccagtagatttactctca
ctactagatgatgtagctacaatatcttctgctccaggaataacaaatgctgcaccaggg
gtagataacctgatgggtgatatgcttggctcccctgtatccaacaatctgatgaatggc
aactcaaatgtttcagctcctattgtagcatataacaaaaatgggttattgatagagttc
cggtgtgagagggaaaatgattcccccacagttagcattatcaacgtgaaagcatctaac
acgtcacctacacagatgtctgactttgtgtttcaagctgcagttccaaagtcattccag
cttcagttacagtctccgtctggtaatattttaccccctctcaatagcggaactgtaaca
caagtcatcaaaataaataatccacagaagcaatctataaggatgcgtctaaaactatct
tacacacagaatggtaactcagtgactgaaatgggtgaagtgaacaatttcccttcagaa
ctttggcaatag
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