Mercenaria mercenaria (northern quahog): 123549504
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Entry
123549504 CDS
T07835
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123549504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123549504
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123549504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
ANAPC3
Motif
Other DBs
NCBI-GeneID:
123549504
NCBI-ProteinID:
XP_045193579
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All DBs
Position
6:complement(18642171..18668678)
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AA seq
823 aa
AA seq
DB search
MDVDNPSDFSDLQQQALQLTADMDTGTDLPRVERNLTQILEAGQRLLAKVGPISQDATDV
KASILLGSKGYDVPKISQKLEGLSAAKTFEPLEPVRDTDIQGFLRNERENALLAVIEQTR
QNTFAETERRHWECMENEWEREKQKILNALLGSGQDTIDFQPETESFLMDSVSMQGRSAL
DNVEMAYSRQVYDYNEQIINSHYIKPNLADMFADATRTLDNKHVQDLWEMVRCMIDIPPC
TSGQSLRLNKNTQKAFVRNARMHLEQSYKKFITSQISGNLQQAQLGGIPGTCNLVRSYLN
IRQATLPRGLEDGDVEGHPTWAMIYYCLRCGDLNAAQTIVQKAGHQLGDFPTFLKEYMSN
ADHRLSPSSETKIHLQYRRVVKQCPDPYKRAVFCIIGQCDYMEDHGDIADKIDDYLWMKL
CQTQVEAEDRSDVLTLQKLQTIMFEDYGESHFNGYQQPFLYFQVLVLTGQFEAAIEFLSR
IERLRCHAVHVALVLYQTKLLLCSQSTQAQLLSRDPDDPSPLRRLNFARLLMMYTRKFEE
TDPREALQYFYFLRELKTSQNENLFMTCVSELVQETKEYEMLLGKLLKDGTRKPGAIDKF
QVDTQRIIEKVARDTESKGAFEDAVRLYDLGKKPDKVLELLNKLLSQVVSQTSSNQTNRD
RLKNLALGIAERYRNSGVADNLRANTSSFYLILDLITFFDLYHESKMEEALEIIRQLQLL
PLTTDAVEHKVNTFRNYSEEVRRCLPDVLLATMNVLHSQYKNARNTAPQSPLVRGRTDDG
GKETYLNYLRSQAKALIMFAGMLPYRLPGDTYARLVQIEVLMN
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgataacccaagtgatttctccgatctgcagcaacaggcgctgcaactcaca
gcagatatggacacaggaacagatctgcctcgagttgagagaaatctaactcagattcta
gaggcaggacagaggctgctagctaaagtaggacctatcagtcaagatgctactgatgtt
aaagcctcaattctgcttggttccaaaggttatgatgtaccaaaaatatcacagaaactt
gaaggtttgagtgcagcaaaaacatttgagcctctggagcctgtcagagacactgatata
cagggtttcctgcggaatgagagagaaaatgctttactagctgtcatcgagcaaactcgg
caaaatacatttgctgaaacagaaagacgccactgggagtgtatggagaatgaatgggag
agggaaaaacagaagatccttaatgccctccttgggtctggacaagatacaatagacttc
caaccagaaactgagagtttcttgatggattcagtgtcaatgcagggacgcagtgcatta
gataatgttgaaatggcctactctagacaggtatatgattataatgaacagattataaac
tcacattacataaaacccaacctggctgacatgtttgctgacgctacaagaactcttgac
aacaagcatgtacaagacctctgggagatggtacgttgtatgatagacattcccccatgt
accagcggacagtcgttgaggctgaacaaaaatacacagaaagcttttgtcagaaatgct
agaatgcatctagaacagtcgtacaagaaattcataactagccagatttctggaaatctc
cagcaagcacaactaggaggtatacctggaacatgtaacctcgttagaagttatctgaac
atcagacaggcaactttaccgagaggacttgaggatggagatgttgaaggtcaccctacc
tgggccatgatctactactgtctaaggtgcggggacctgaacgcagcacagacaattgta
cagaaagctgggcatcagcttggtgattttccaacatttttgaaagagtacatgagtaac
gcagaccataggttgagtcccagcagtgaaacaaaaattcatctacagtatagacgtgtt
gtgaaacagtgtcctgacccttacaaaagggcagtgttttgcatcattggacagtgtgat
tacatggaggaccacggggatatagcagataagatagatgattatttatggatgaagtta
tgtcagacacaggtagaggctgaagacagatcagatgttcttacattacagaaactacag
actattatgtttgaggattatggagaaagccatttcaatggataccagcaaccattccta
tatttccaagtattggttctgacaggacagtttgaggcggctatagaattcctgtctcgt
atagagaggttacgatgtcatgctgtgcacgtggctcttgtgctgtatcaaacaaaactg
ctgttatgttcacagtcaacacaagcgcagctattaagcagagatcccgatgacccaagt
ccattgaggagactaaactttgccagactactgatgatgtacaccaggaagtttgaagag
actgaccctagagaggccctgcaatatttctactttctcagagagctgaagaccagtcag
aatgaaaacctttttatgacctgcgtctcggagcttgtacaagaaaccaaagagtatgag
atgcttctgggcaagttactcaaagacggaacaagaaagcctggtgctatagacaaattt
caagtagatactcaaagaatcatagagaaggttgccagggataccgagagtaaaggagca
tttgaagatgctgtcaggctatatgatcttggaaagaaaccagacaaagtattggagttg
ttgaacaaactactaagccaggtggtgtcacagacctccagcaatcaaaccaacagggac
agactgaaaaatctggcgctaggaattgcagaaagatacagaaacagtggggtagctgac
aatttaagagcaaacacaagcagtttttacctcatccttgaccttatcacattctttgac
ctttaccatgaaagtaaaatggaggaagctttggaaataatcaggcagctgcagttactt
cccctgacaacagatgccgttgaacataaagtgaacacatttagaaattattctgaggag
gtccgaagatgtctgccagatgttttgttagccacaatgaatgttttacacagtcagtac
aaaaatgctagaaatacagcacctcaaagtccattggtacgagggagaacagatgatgga
ggcaaagaaacatatttgaactacttgagaagtcaagccaaggcactgatcatgtttgct
ggcatgttaccatacagattacccggcgacacatacgctagacttgtgcagatagaagtg
cttatgaactga
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