Mercenaria mercenaria (northern quahog): 123549544
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Entry
123549544 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123549544
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04150
mTOR signaling pathway
mmer04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
123549544
04150 mTOR signaling pathway
123549544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123549544
Membrane trafficking [BR:
mmer04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
123549544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
HYR
FXa_inhibition
Ephrin_rec_like
EGF_LRP2
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
123549544
NCBI-ProteinID:
XP_053401221
LinkDB
All DBs
Position
6:complement(16841172..16895237)
Genome browser
AA seq
1779 aa
AA seq
DB search
MKRDLLFILLLDLLYWAYGGPPVYVSNGTHIVSYSKFGTGAQSVLGQRDYRIVGLAIDVA
KNKLFWSDISFEKTNRGIYTSDLQGQNITRIVYDVGEVNGLTVDWVSRHIYWTDLERKTI
EVSNYDGSARRIIVSSDLKTPRAIVASPIYGYIFWADQRNHRIERAWLDGSHRRTVVKSS
SYFPNQLAISIKDKQLYWVDTWEHAVFSSKLNGKKCKKQVNLEQVTKGSPGFGLLVFGNT
AVISTWFNTAIYSLMLNSKKLIWQQEVTNLGTRELFSLISLNPATQPMTYHPCLEEDNGG
CSHLCLPTHKTQYVCACPTYGGLALSSDGKTCKVPEEALMISMEDTGNLGFIAIDHGWST
EVHLISSSKSPGAITYDRRDHMVYWSDTAEGTIYRSRIEGTENAVFLDRTNGIGRVDDLS
FNSVTGCLYFTNAVLIDASYDGKVHSLHSVEMIEVHTENRITILKSDKKPIRILVDEIGS
YLYIVLAGHSPEIVRTDLDGANATTLSVNVSDPLALAITGEILTLADRRYENNSVETALL
KYNTVTEEVIETVVLNKTTYSIATSTRELFLADAVQSSLVVYNGTEQHTLLEYGMVADLV
YTVTDPETEDHITKCIKAGCSHGCVPLPSLYPADVRCVCPSQSSLVLHSDQKNCKRPDNF
LLYADINKIQMLSLDKDLFSQAITIFYGDGQAHIASLAYDESKERVYWADRQSKSIYLSH
LHQIEPILVYKQDDPLQEMIFDPRRQRLYWSSKFENSLGYYISSLNMKRGLDSLQTLFSY
HRTMKSLSLHPKGKWLYWIEEETEFEAAGIGSCKSKPEVRYNNVLEEGLQSPNSLFVTKD
KLYIAEKGGKILVVNLEGKIMEVIYPESPDINYLIVHQNVFIVSDTKENLIKVTDIKTGV
SMVLADHLDKPSAVAFHYSSLQMDACDQSECTDNCIPLLRNDYVCTCLNGKALLDDRKTC
IEVPSTTVTQITSTTTVRTTTPKTTTSTTTTPTPETTTTTPETTTTTTTTYNPVKIKWFT
YTSTETSSLSEVITEVDKARNTSSITFVRLESSSQSTESKAFEEHTGEPKPTQSTEEIIY
VTDESLEHVTAPDESRAYKIVPHDDVKVEPIDYPYFENCPGETIIARVPSTDKVLELPIK
PAGYDSNGSPLPLHCDKEMTESGVIIPWKGDESESRQNVTFFVTDSLHQKTKCTFTVILQ
DVDPPKFTFCPDTVKVRTDERSAIVNWTLPEAVDNVKLKLTQSSHSPGNHFGPGETRVNY
TAIDIAGNTAACLFSVFVLHDHVCNLPDIHHGGIICNHGDGVTGECKVICEEGYVLNPIR
TFRRMFNCRHPDDIDALNKIMSTQEPCLKHDYPSLLRQRFSFMVNGPISLHKTKVRDDMN
LAIVTDLEEEKLCIDDVCQLGNISIQCDEDVIVDENENGTCLDEEKRMEFFISFNITLSN
STGVDVETLLHDIHLELISLASLLQLQIEGHMYMAIAESLSKTEGVWTCPVGRIQENGIC
ISCPPGTFHNITLNVCQYCTMGYYQDNNGQIACHMCDPGRTSPDGATSSNQCHAIPSMDE
MTLFIIVTTCSFGVVFLCMAITLYLQFQRQKKRNQQASYQKKTRYNMSPNVYVAPPPILK
SKLDENYSSGHKTYSIDRKKPINMYANHDYEDVERSPVTGPLAAYQSDLLTMLQGQSLSR
DYSPGEEVPTGTLSRENTFSNPTYSPQFGVRRGDNGSLTRGMNTPSPGPQRKMSYDSTFS
NQSPRTIRSQRTPTSDTPLITQSPLLRLKLAAYNLNHED
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagatttattatttatattgttgttggatttattatactgggcatacggtggg
cctccagtgtacgtatcaaatggcacacacattgtcagttactcgaaatttggaacggga
gcacaatcggttctaggacagagagactatcgtatagttggattagcgatagatgttgcc
aaaaacaaattgttctggtccgacatcagttttgagaagacaaaccgtggtatctatacc
agcgatcttcaaggccaaaatatcacacgaattgtctatgacgtcggggaggttaatggt
ttaacagtagactgggtatcacgtcatatatactggactgacctggaacggaaaacgatc
gaggtttcaaactatgacggttcagccaggaggatcattgtatcgtctgacttgaagacc
cccagagccatagtggcgtcacctatatacgggtatatattttgggctgaccagagaaat
caccgtattgagcgtgcctggctggatggctctcatcgtcgaacagtggtcaagtcttcc
tcgtattttccgaaccagctagccattagtatcaaagacaaacagctgtactgggtagat
acttgggaacatgccgttttttcgagcaaactaaacggcaagaagtgcaagaaacaagtc
aaccttgaacaggtcaccaagggatccccaggcttcggacttcttgtgttcggaaacacg
gcagtaatcagcacatggtttaataccgccatatactcccttatgctgaactcaaagaag
cttatctggcagcaggaggtcacaaatcttggaacaagggagctgttcagcctgataagc
cttaacccagccacacaaccaatgacgtatcacccttgccttgaggaggataacggcgga
tgttcacatctgtgtcttccaactcataaaacacagtacgtatgtgcttgtccaacatac
ggtggcttggcgttatcttcagatggtaaaacctgcaaagtaccggaagaggccctgatg
ataagtatggaggatactggtaatctgggattcattgctattgatcatggatggagcacg
gaagttcatttgattagttcgtcaaaatctccaggggcaattacatatgatcgcagagac
catatggtatattggagcgacacggccgagggtaccatttataggagtagaatagaaggc
actgaaaatgctgtgtttctggacagaactaacggaataggtcgtgtggacgatttgtca
tttaactcggtgaccggatgtttatattttacaaatgctgttcttattgatgcaagttat
gacgggaaagttcatagtttacattctgtagaaatgatagaagtacatacagaaaacaga
ataaccattctaaaaagcgacaagaagccgatcagaattttggtcgatgagatcggaagt
tacctgtatattgtgttagctggtcactccccggaaattgtgcgcacagatctggatgga
gctaatgcgacaacattgtctgtaaatgtttctgatccacttgcactggctattaccggt
gaaatattgaccttagctgatagaagatacgaaaacaatagtgttgaaacagctctattg
aaatataacaccgtaacagaggaagtgattgaaacagttgtgttaaataagacaacatac
agtatcgcgacaagcacaagagaactatttcttgccgatgctgtacaaagttcactagtg
gtgtataatggtacggaacaacatacattattagaatacggaatggtcgccgatcttgtc
tacacagtaacagacccagaaacagaagatcatataactaaatgcataaaagcgggatgt
agtcatggatgtgtacctttaccaagtctttaccccgccgacgtaagatgcgtttgtccg
tcccagagcagtctcgtacttcatagtgaccaaaagaattgtaaaaggccagacaacttc
ctgctatatgctgacatcaacaaaatacagatgctaagtttagataaggacctgttctcg
caagctattaccatattttacggtgacgggcaggcacatattgcatctctggcctacgac
gaaagtaaagaacgtgtttactgggcagacaggcaaagcaagtctatatatttgtcgcac
cttcatcagatagaacccatcttggtttataaacaagatgaccctcttcaagagatgata
tttgatcctcggcgccagcgtctttactggtcaagcaagtttgaaaatagtttgggttat
tatatttcaagtctgaatatgaagcgaggattggattcattgcagaccttattttcgtat
cacagaactatgaagtcattgtctttgcatccgaaggggaaatggttatactggatagag
gaggagacggaatttgaagctgcgggaatcggttcttgtaaatctaaaccggaagttcgt
tataacaacgttttagaggaggggttgcagtcaccaaacagcctctttgtcacaaaagac
aagctttatattgcagaaaaaggcggcaaaatacttgtggtcaatctggaaggaaagatc
atggaggtgatatatccagaatcaccggacattaattacctgattgttcaccagaacgtc
ttcattgtgtctgatacgaaggaaaatcttattaaagttaccgatattaaaaccggtgtt
tccatggttttagcagatcatctggacaaaccgtcagcagttgcattccattactcttcc
ctccagatggacgcatgtgatcaaagtgaatgtacggataactgcatacctctgctgcgc
aatgattatgtttgcacatgtttaaatggaaaagccctactggatgacagaaaaacgtgt
atcgaagttcctagtacaacagttacacaaataacctctacaacgacagttagaacaaca
actccgaaaacaacaacatcaacaaccacaacaccaacgccggaaaccacaacaacaaca
ccggaaaccacaacaacaacaacaacaacttataatccagtcaagattaaatggtttacc
tacacatctacggagacgtcctcgctatccgaagtgatcaccgaagtagataaagctaga
aacacgtcatccataacctttgtaaggcttgagtcaagtagccagtctacagagtctaaa
gcgtttgaagaacacactggtgaaccaaaaccgacacagtctaccgaggagatcatatac
gtaactgatgaatctttagaacacgtgactgcaccagatgaaagtagggcttacaaaata
gtacctcatgatgatgtaaaagtagagcctatagactacccgtattttgagaactgtcct
ggagagaccattatagccagagttcccagcacagacaaagttttagaacttccaattaaa
cctgctggctatgatagcaacggatcgccactaccactccactgcgacaaggagatgaca
gaatcaggcgtgataataccatggaaaggggacgagtcagaaagccgccaaaatgttaca
ttcttcgttaccgattcactacatcagaaaactaaatgcacatttactgtaatacttcaa
gatgtggatccgccaaaattcaccttttgtcccgataccgtaaaggttcgcacagacgaa
cggtcagcaattgttaactggactctaccggaggctgttgacaacgtcaaactaaagctt
acacaaagttcgcactcacctgggaatcattttggtccaggggagactagggtcaactat
acagcaattgatatagctgggaatacagctgcctgcttgttcagtgtgtttgttttacat
gatcatgtctgcaacctgcccgatatccatcacggtggaataatatgtaaccatggcgac
ggcgtaactggcgaatgtaaggtcatttgtgaggagggttatgttctaaatccaatcaga
acttttagacgcatgttcaactgcagacatccagatgacattgatgcacttaacaaaatc
atgtcgacgcaagaaccatgtttaaaacacgattatccatcattgttaaggcagaggttt
agctttatggtaaacggtccgattagccttcacaagacaaaggtcagagatgacatgaat
cttgcaatcgtcactgatctcgaggaggaaaagctttgtatcgatgacgtttgccagctt
ggtaatataagcatacagtgtgatgaagatgtgatagttgatgagaatgaaaatggaacg
tgtttggatgaagagaaaagaatggagttcttcattagttttaacataactctctcaaac
agtactggagtagatgtggaaacacttctgcatgatatccacctcgagctgatatcactg
gcctccttattgcaactgcagatagaaggtcacatgtatatggctattgcagaaagttta
tcaaagacagaaggtgtttggacatgcccagttggacgaatacaagaaaatggcatttgt
atttcctgtcctcctggaacgttccacaacataaccttgaacgtttgtcagtactgtacc
atggggtattaccaggacaacaacggtcaaatagcatgtcacatgtgtgatcctgggcgg
acatcaccagatggggctacgtctagtaaccagtgccatgccataccatctatggacgag
atgaccctgtttattatcgtgaccacgtgctcctttggagttgtgttcttgtgtatggca
attacactatatctgcagttccaacgccagaagaaacgcaaccaacaagcaagttaccag
aagaaaacacgctacaacatgtcaccaaacgtatacgtagcaccgcctccaattttgaaa
tcaaaacttgatgaaaattattcatctgggcacaaaacatacagcattgacaggaagaag
ccaattaacatgtacgccaatcatgactatgaagatgtagaaagaagccctgttactggg
ccactggccgcttatcagagtgacttgctcactatgttgcagggacagagtcttagtcgg
gactattccccaggagaagaagttccaactggaacattatcccgagaaaataccttctcc
aaccctacttattcacctcagtttggggtgcgtaggggcgacaatgggtctttaacacgt
gggatgaacaccccgtcgccaggaccccaaagaaaaatgtcttatgacagtacattttcc
aaccagtcaccaagaacaatccgttctcaaagaacaccgaccagcgatacacctttaatc
acacagtcgcctctactgagattaaaactcgcagcttataacctcaatcatgaagattag
DBGET
integrated database retrieval system
